| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314503
Identifier: 158314503
GI number: 158314503
Start: 3169382
End: 3170596
Strand: Direct
Name: 158314503
Synonym: Franean1_2679
Alternate gene names: NA
Gene position: 3169382-3170596 (Clockwise)
Preceding gene: 158314502
Following gene: 158314504
Centisome position: 35.29
GC content: 66.67
Gene sequence:
>1215_bases GTGACCACCACATCGCAGCCCGACGTCGAGATCGATCCCCGCCTCGGATATGCGGTGTTCGATGCCGACAACCACTACTA CGAAGCCGTGGACGCGCTGACGCGCCACCTTCCGAAAGAGTTCGCCAACCGCGGCGCGCGATGGATCGACCTGAACGGAC GCAAGCGCCTGATGCTCGGCGCTAAGCTTTTCGAACTCATTCCGAACCCGACCTTCGACCCGATCGGGAAGCCGGGCGCG CTCTATCAGTACTTCAAGGGCGTCAACGCCGATGGTGCCGACGTGCGAACACTGGTGGGTGATCTGGAGAAGATCCGGCC CGAGTACCGGGACCGGGACGTGCGTCTAGCGGTCATGAACGACCAGGGGGTCGGCGCGGCCTGGTTCTTCCCGACGCTGT CCGTCGGTCTCGAGGTGGCGTTCCAACCCGACATCCGGGCCGCTCTGGCGACCTTCTCGGCGTTCAACCGGTGGCTTGAC GACGACTGGGGCTTCGCCTACCAGGACCGGATCTTCTCCGCTCCGTACCTTTCGCTCTCCGACGTCGACTGGGCCGTGCG GGAGCTGGAGTGGTGCATCAGCCGCGGCGCTCGGGTCATCACCATGCGTAACGGCACTGTGTACACGGCCGAGGGGACGG CGTCTCCCGCCGACGAGCGGTTCGACCCGTTCTGGGCGCGGGTCGAGGAGGCGGGCATCGTCATGGCCCCGCACGCCGGT GACGACGGCTACGACTTCCTCGCGGACATGTGGGAGTCCAGCACGTCGTGGCGGATGCTGTTCAACTCCCCGCTGAAGAA GGCGGTCGCCTCGCAGCGCGCGGTGCCGGACTTCTACGCGGCGATCATCTGTCATCGGCTGTTCGAACGGTTCCCAGGCC TGCGTTTCGCGTCCATCGAGAACGGGGGTGCGTGGGTGGCGCCGCTGCTGGCCCGTCTCCACAAGGGCCATACCCAAACG GCGGGCTGGTACAAGATCGATCCTGTCGAGCAGTTCCGGGAGCACGTGTGGATCACTCCCTTCTGGGAGGACAACGTGCA GGAGATCGCCCGCACCATGCCCGCCGGGCGTCTGCTGTTCGGCAGCGACTGGCCACATCTCGAGGGCGTCGCGCAGCCGC TGGACTTCTTGACGGCCCTCGAGGGCTTCGACGCCGCCGACCGGCGGCGCATCATGCGCGACAACGCCGCGGCGCTGACC GCTGCCCCACGCTGA
Upstream 100 bases:
>100_bases GGCGCCGTCCTGGCCCGCGCGAGGCCGTGCCCTGACAAGGAACGGGTGTGGACGGCAGGAGTTCTGCGGTCCGGACGCTG ATGGACAAGGAGGCGTGGGC
Downstream 100 bases:
>100_bases CCGACCACATCCCATCGCGAGAGGAGTCGCATGAGCGCGCGGTATGTTGTGCGGCCCGTGGGCCGCGACGAACTGCGGTG GCACGACGAGTTGCCAGCCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTTTSQPDVEIDPRLGYAVFDADNHYYEAVDALTRHLPKEFANRGARWIDLNGRKRLMLGAKLFELIPNPTFDPIGKPGA LYQYFKGVNADGADVRTLVGDLEKIRPEYRDRDVRLAVMNDQGVGAAWFFPTLSVGLEVAFQPDIRAALATFSAFNRWLD DDWGFAYQDRIFSAPYLSLSDVDWAVRELEWCISRGARVITMRNGTVYTAEGTASPADERFDPFWARVEEAGIVMAPHAG DDGYDFLADMWESSTSWRMLFNSPLKKAVASQRAVPDFYAAIICHRLFERFPGLRFASIENGGAWVAPLLARLHKGHTQT AGWYKIDPVEQFREHVWITPFWEDNVQEIARTMPAGRLLFGSDWPHLEGVAQPLDFLTALEGFDAADRRRIMRDNAAALT AAPR
Sequences:
>Translated_404_residues MTTTSQPDVEIDPRLGYAVFDADNHYYEAVDALTRHLPKEFANRGARWIDLNGRKRLMLGAKLFELIPNPTFDPIGKPGA LYQYFKGVNADGADVRTLVGDLEKIRPEYRDRDVRLAVMNDQGVGAAWFFPTLSVGLEVAFQPDIRAALATFSAFNRWLD DDWGFAYQDRIFSAPYLSLSDVDWAVRELEWCISRGARVITMRNGTVYTAEGTASPADERFDPFWARVEEAGIVMAPHAG DDGYDFLADMWESSTSWRMLFNSPLKKAVASQRAVPDFYAAIICHRLFERFPGLRFASIENGGAWVAPLLARLHKGHTQT AGWYKIDPVEQFREHVWITPFWEDNVQEIARTMPAGRLLFGSDWPHLEGVAQPLDFLTALEGFDAADRRRIMRDNAAALT AAPR >Mature_403_residues TTTSQPDVEIDPRLGYAVFDADNHYYEAVDALTRHLPKEFANRGARWIDLNGRKRLMLGAKLFELIPNPTFDPIGKPGAL YQYFKGVNADGADVRTLVGDLEKIRPEYRDRDVRLAVMNDQGVGAAWFFPTLSVGLEVAFQPDIRAALATFSAFNRWLDD DWGFAYQDRIFSAPYLSLSDVDWAVRELEWCISRGARVITMRNGTVYTAEGTASPADERFDPFWARVEEAGIVMAPHAGD DGYDFLADMWESSTSWRMLFNSPLKKAVASQRAVPDFYAAIICHRLFERFPGLRFASIENGGAWVAPLLARLHKGHTQTA GWYKIDPVEQFREHVWITPFWEDNVQEIARTMPAGRLLFGSDWPHLEGVAQPLDFLTALEGFDAADRRRIMRDNAAALTA APR
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45674; Mature: 45543
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSQPDVEIDPRLGYAVFDADNHYYEAVDALTRHLPKEFANRGARWIDLNGRKRLMLG CCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHH AKLFELIPNPTFDPIGKPGALYQYFKGVNADGADVRTLVGDLEKIRPEYRDRDVRLAVMN HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHCCCCEEEEEEC DQGVGAAWFFPTLSVGLEVAFQPDIRAALATFSAFNRWLDDDWGFAYQDRIFSAPYLSLS CCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC DVDWAVRELEWCISRGARVITMRNGTVYTAEGTASPADERFDPFWARVEEAGIVMAPHAG HHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCHHCCHHHHHHHHCCEEECCCCC DDGYDFLADMWESSTSWRMLFNSPLKKAVASQRAVPDFYAAIICHRLFERFPGLRFASIE CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEC NGGAWVAPLLARLHKGHTQTAGWYKIDPVEQFREHVWITPFWEDNVQEIARTMPAGRLLF CCCCHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCEEECCCCHHHHHHHHHHCCCCEEEE GSDWPHLEGVAQPLDFLTALEGFDAADRRRIMRDNAAALTAAPR CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTTSQPDVEIDPRLGYAVFDADNHYYEAVDALTRHLPKEFANRGARWIDLNGRKRLMLG CCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEHHH AKLFELIPNPTFDPIGKPGALYQYFKGVNADGADVRTLVGDLEKIRPEYRDRDVRLAVMN HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHCCCCEEEEEEC DQGVGAAWFFPTLSVGLEVAFQPDIRAALATFSAFNRWLDDDWGFAYQDRIFSAPYLSLS CCCCCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC DVDWAVRELEWCISRGARVITMRNGTVYTAEGTASPADERFDPFWARVEEAGIVMAPHAG HHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCHHCCHHHHHHHHCCEEECCCCC DDGYDFLADMWESSTSWRMLFNSPLKKAVASQRAVPDFYAAIICHRLFERFPGLRFASIE CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEC NGGAWVAPLLARLHKGHTQTAGWYKIDPVEQFREHVWITPFWEDNVQEIARTMPAGRLLF CCCCHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCEEECCCCHHHHHHHHHHCCCCEEEE GSDWPHLEGVAQPLDFLTALEGFDAADRRRIMRDNAAALTAAPR CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA