| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158314492
Identifier: 158314492
GI number: 158314492
Start: 3151816
End: 3154701
Strand: Direct
Name: 158314492
Synonym: Franean1_2665
Alternate gene names: NA
Gene position: 3151816-3154701 (Clockwise)
Preceding gene: 158314491
Following gene: 158314493
Centisome position: 35.09
GC content: 64.38
Gene sequence:
>2886_bases ATGAGCGATGAGAACCAGGTACCGGAACAGCACGACCGAATCGGCCCACCTGCTGGCGCCGTCATTTCCAAGAAGGACCG CGACGCGGTCCTGAATCTGTGCGCTGAGCGGTACGGCGAGCGCGTCAGCGCGAATTGGTTGCTCGACGCGCTTGATGTGC CTGTTGGGCGCCGCCCATCCTGGGAGTCGGCGACCTCCATAATCTGGTGGAACCAGATGCTCGCCATACTTGAGTTCGGA ATCATCGTCGATCCACATCGGAAACTCATCGCAAAAATGCGCGATGAGTTTCCGGGAGACTCGACCGTTGGACGCCTCGC CGAAACCTATCTCTCGGCCGAGAATAGGCACGAGGCGATTCCGCCCAACGGAAGGAACGTCGTCGCGGACGCGATACTGA AGGACACGCTTGCCGCGCACGGGCTTACTAAAAAGGTGGCCGAGGCGAGGAAGTCGACGGCGAGTGATCCCGAGCGTGCC GCGGAACTGTTCGCCTCGATCGCCCAACAACTGGACCTTTCCTCATTTCACCTGCACGCGGACGGATTCCGAAGCCGCCA GGCATCGACACTGCAAGCTGCGGGCCGCTCCAACGACGCGGCCGTGGTGAGGATCTCGCTCGGTTGGCGGCTCCTCCAGC GGTGTGACCAGTGGGGCGCCATGTCGGAGGCGGCAGACCTAGAGAAGATCGAGAGTCAACTCGATGAGCCGATAAGAAGA TCCGCGATCGCGCTGGCTAGGGCAGTTGAGTTCGGCCGCGAGCGCGACGTGACCCTCGATGCCGTGGCGATGACCTTCGA TGATCTACGCTCCGGAGATCAAGGCGAGTTCGAGGCCGCGCTTCTGCTCGCCGAACGCGCGGTGGCCTGGCGACAGCTGG AGATCGTCCGGACTCGCGCCGGCCGCCTTCGGCGACTCGCCGAGGATGCGCCAGACTCCGGAAACACGGCGGAGGCCGTC GTCCGCCTGCTGATGTGCCTCGCTGACGCTTCGGGGGAATGGCCGAAGTTGGCGAGAAAGGCCAAACGCGAGTACGCAAA GCCGCTTCGGGCCTGGGTGCTGGCAAGGCATGCCCGCCACTTGGCCCTGTCGGAACAGCCAGACCACGCCGTCGAGCGCT GGGAGGAAGCGGCCAGTCTGGCCGCGAAGAAGAAGCTCCACAGTGACGCGGCTGACTGGCTGTATGCTGCCCGCACCGTG CTCGCACTCTATGGCCGATCCTTCGACAGCGATGGCGACCCGAACGAGTACCATCGCGTCGCCCAGGCAGCACGAGTGCG GGGCGATCGATCGGTGCTGCGACGGCCATTCCCGATGCGCGAGCGGGTGCTCGACCGAATGGCCAGCGGCAAATGGCCCG ATGCTTTCGAGGCCCTTCAGCAGTTGCTCTGGCACTCGACTGTGATCGGCGACTGGAACGGCGAGCTTACCACCCACGAG AACTTTGGGCGGCTGTTCGAGGAAGCCGGGGATCCACTTCTGGCCTCCGAGCACTATCTGAAGAGCAACTCGCACAAGGA ACTCAAGAAAATCAGAAGCAAGTTCAAAGAAGCCGCGATCGTGCTGCCCACCATCCTGCTAGACGGCCCGCCCTGGGAGA CAGAGGAAGCTTACAATCTCGTCGCCCGGCTCGCCGACCGGATCACCGACGACAACGGGAAGGAATGGCTCGGGCTGGCA TTGACAGAGCTCAAGGACCCGCTCCTCCCCAAGGCGTCAGTACTCGCGCGGGACCGGTACCTTGCCGCCTTCCGGGCCAC CGCCAACCTCGCGGGGTTGGCAGACGAGACTCAGGCACGCCAGATCCTTGATCACACGAAGGTTCTTATCCCAAGAGAGC CAGGGGCCTACCGCCGCACCGACGACGACCAGGTCGACGTGCTCCTCACGCTGGCCCGCCGAAGCGGAGAGACCGGCGAC GAGGCGTTCGAGCAACTCTGCGCGGGCCTCCTCCTCAATGCTCAGCTGGGCCACAGGATCCTGAGCCACGGCGGAGCGCT CCTGCGAAGCCGGGTCCGCGACGTGGAACGGCATCTGTCAGACCAGGCGCGCGCCGGCAACGTTCAGGCAGCGCTTGCCC TGGTAGTTGCTGATGCCGACACAACCCCTTCCGACGACCTGGCCTGGACGATGTACCACAGGGCGGTTCACCCGGGAGGC GAGACAGGCGGCACCGAGCTGGATCATCAAGGGGTAGCCCTCCTAGTCACGACACTGGGCGAGGCCGAGGCCGAGGCATT CGCCGCGGCGATGCTCACCCTAGCTCGCGACCCGCAGCAGTCCGCGACAGACCGGGAAACCGCACTCCAGGCAGTGATGA CCATCGCCCGTAGTCTCCCGGACGAGGCGCGAACTGCGGCGTTCTGCACCGTCGCGGAGCTAGCAGCCGGCCGGTATGAC TCCAGCACCTCCGACTGGAATCTGCATGGCAAGGACGACCTACTGGCGCGTATACGGATCAAATTCGGCGGCAGCTCGCT GATCGCCCCTGCGGCGCTGTGGGCCGCCGCGGCACTCGCGACAAGCGACGCTGATTACGAGACAGTTCAGCAGCTTGCGG ATGCTTTGCTTGCTGGCGTCGATGACAGCTCGGCCGACACCATAGGAAAAGCCCTCGCCCAGATTCCTTTCGAACAGTTC CATGTCGGTCCAGGACCTGGCACAGGCCACCCGTCGGCCGTCATTCGGGCGATCGCCGCGATCAAGTGGGCACGCAGCGA CCGCCGCGACCCAGCGGTCGGCGCCAGATTCGCAAAAGACCAGGACGGCTCCGTCCGGCTTTCGTTGGCGCAGGCGCTGC GGAAGAACCCACACCCCGAGGTCGAAGCAATCCTGAGCAACGACGTACGCCGAACAGTACGCACCGCCATGCACCGGAGT TCTTAA
Upstream 100 bases:
>100_bases TCCTCTTTGTAGCCGCCGCCCGAGTCCGCGACCCCCTTACCATCACCTGGTACGGCCCCCGCAGCCCTCTGCCGCTACCT CCCCAGGCACGGGGCGCCGG
Downstream 100 bases:
>100_bases ACTCACCCGATCGACAGGCAGAATCGGGCGGCGACCGTCACGACGGCGCCTCCGAGGTGCTCCAAGCATCCCCAACTCGC GAGGCCGCTGGTCACGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 961; Mature: 960
Protein sequence:
>961_residues MSDENQVPEQHDRIGPPAGAVISKKDRDAVLNLCAERYGERVSANWLLDALDVPVGRRPSWESATSIIWWNQMLAILEFG IIVDPHRKLIAKMRDEFPGDSTVGRLAETYLSAENRHEAIPPNGRNVVADAILKDTLAAHGLTKKVAEARKSTASDPERA AELFASIAQQLDLSSFHLHADGFRSRQASTLQAAGRSNDAAVVRISLGWRLLQRCDQWGAMSEAADLEKIESQLDEPIRR SAIALARAVEFGRERDVTLDAVAMTFDDLRSGDQGEFEAALLLAERAVAWRQLEIVRTRAGRLRRLAEDAPDSGNTAEAV VRLLMCLADASGEWPKLARKAKREYAKPLRAWVLARHARHLALSEQPDHAVERWEEAASLAAKKKLHSDAADWLYAARTV LALYGRSFDSDGDPNEYHRVAQAARVRGDRSVLRRPFPMRERVLDRMASGKWPDAFEALQQLLWHSTVIGDWNGELTTHE NFGRLFEEAGDPLLASEHYLKSNSHKELKKIRSKFKEAAIVLPTILLDGPPWETEEAYNLVARLADRITDDNGKEWLGLA LTELKDPLLPKASVLARDRYLAAFRATANLAGLADETQARQILDHTKVLIPREPGAYRRTDDDQVDVLLTLARRSGETGD EAFEQLCAGLLLNAQLGHRILSHGGALLRSRVRDVERHLSDQARAGNVQAALALVVADADTTPSDDLAWTMYHRAVHPGG ETGGTELDHQGVALLVTTLGEAEAEAFAAAMLTLARDPQQSATDRETALQAVMTIARSLPDEARTAAFCTVAELAAGRYD SSTSDWNLHGKDDLLARIRIKFGGSSLIAPAALWAAAALATSDADYETVQQLADALLAGVDDSSADTIGKALAQIPFEQF HVGPGPGTGHPSAVIRAIAAIKWARSDRRDPAVGARFAKDQDGSVRLSLAQALRKNPHPEVEAILSNDVRRTVRTAMHRS S
Sequences:
>Translated_961_residues MSDENQVPEQHDRIGPPAGAVISKKDRDAVLNLCAERYGERVSANWLLDALDVPVGRRPSWESATSIIWWNQMLAILEFG IIVDPHRKLIAKMRDEFPGDSTVGRLAETYLSAENRHEAIPPNGRNVVADAILKDTLAAHGLTKKVAEARKSTASDPERA AELFASIAQQLDLSSFHLHADGFRSRQASTLQAAGRSNDAAVVRISLGWRLLQRCDQWGAMSEAADLEKIESQLDEPIRR SAIALARAVEFGRERDVTLDAVAMTFDDLRSGDQGEFEAALLLAERAVAWRQLEIVRTRAGRLRRLAEDAPDSGNTAEAV VRLLMCLADASGEWPKLARKAKREYAKPLRAWVLARHARHLALSEQPDHAVERWEEAASLAAKKKLHSDAADWLYAARTV LALYGRSFDSDGDPNEYHRVAQAARVRGDRSVLRRPFPMRERVLDRMASGKWPDAFEALQQLLWHSTVIGDWNGELTTHE NFGRLFEEAGDPLLASEHYLKSNSHKELKKIRSKFKEAAIVLPTILLDGPPWETEEAYNLVARLADRITDDNGKEWLGLA LTELKDPLLPKASVLARDRYLAAFRATANLAGLADETQARQILDHTKVLIPREPGAYRRTDDDQVDVLLTLARRSGETGD EAFEQLCAGLLLNAQLGHRILSHGGALLRSRVRDVERHLSDQARAGNVQAALALVVADADTTPSDDLAWTMYHRAVHPGG ETGGTELDHQGVALLVTTLGEAEAEAFAAAMLTLARDPQQSATDRETALQAVMTIARSLPDEARTAAFCTVAELAAGRYD SSTSDWNLHGKDDLLARIRIKFGGSSLIAPAALWAAAALATSDADYETVQQLADALLAGVDDSSADTIGKALAQIPFEQF HVGPGPGTGHPSAVIRAIAAIKWARSDRRDPAVGARFAKDQDGSVRLSLAQALRKNPHPEVEAILSNDVRRTVRTAMHRS S >Mature_960_residues SDENQVPEQHDRIGPPAGAVISKKDRDAVLNLCAERYGERVSANWLLDALDVPVGRRPSWESATSIIWWNQMLAILEFGI IVDPHRKLIAKMRDEFPGDSTVGRLAETYLSAENRHEAIPPNGRNVVADAILKDTLAAHGLTKKVAEARKSTASDPERAA ELFASIAQQLDLSSFHLHADGFRSRQASTLQAAGRSNDAAVVRISLGWRLLQRCDQWGAMSEAADLEKIESQLDEPIRRS AIALARAVEFGRERDVTLDAVAMTFDDLRSGDQGEFEAALLLAERAVAWRQLEIVRTRAGRLRRLAEDAPDSGNTAEAVV RLLMCLADASGEWPKLARKAKREYAKPLRAWVLARHARHLALSEQPDHAVERWEEAASLAAKKKLHSDAADWLYAARTVL ALYGRSFDSDGDPNEYHRVAQAARVRGDRSVLRRPFPMRERVLDRMASGKWPDAFEALQQLLWHSTVIGDWNGELTTHEN FGRLFEEAGDPLLASEHYLKSNSHKELKKIRSKFKEAAIVLPTILLDGPPWETEEAYNLVARLADRITDDNGKEWLGLAL TELKDPLLPKASVLARDRYLAAFRATANLAGLADETQARQILDHTKVLIPREPGAYRRTDDDQVDVLLTLARRSGETGDE AFEQLCAGLLLNAQLGHRILSHGGALLRSRVRDVERHLSDQARAGNVQAALALVVADADTTPSDDLAWTMYHRAVHPGGE TGGTELDHQGVALLVTTLGEAEAEAFAAAMLTLARDPQQSATDRETALQAVMTIARSLPDEARTAAFCTVAELAAGRYDS STSDWNLHGKDDLLARIRIKFGGSSLIAPAALWAAAALATSDADYETVQQLADALLAGVDDSSADTIGKALAQIPFEQFH VGPGPGTGHPSAVIRAIAAIKWARSDRRDPAVGARFAKDQDGSVRLSLAQALRKNPHPEVEAILSNDVRRTVRTAMHRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105424; Mature: 105293
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDENQVPEQHDRIGPPAGAVISKKDRDAVLNLCAERYGERVSANWLLDALDVPVGRRPS CCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC WESATSIIWWNQMLAILEFGIIVDPHRKLIAKMRDEFPGDSTVGRLAETYLSAENRHEAI CHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC PPNGRNVVADAILKDTLAAHGLTKKVAEARKSTASDPERAAELFASIAQQLDLSSFHLHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEC DGFRSRQASTLQAAGRSNDAAVVRISLGWRLLQRCDQWGAMSEAADLEKIESQLDEPIRR CCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SAIALARAVEFGRERDVTLDAVAMTFDDLRSGDQGEFEAALLLAERAVAWRQLEIVRTRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLRRLAEDAPDSGNTAEAVVRLLMCLADASGEWPKLARKAKREYAKPLRAWVLARHARH HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALSEQPDHAVERWEEAASLAAKKKLHSDAADWLYAARTVLALYGRSFDSDGDPNEYHRV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AQAARVRGDRSVLRRPFPMRERVLDRMASGKWPDAFEALQQLLWHSTVIGDWNGELTTHE HHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHH NFGRLFEEAGDPLLASEHYLKSNSHKELKKIRSKFKEAAIVLPTILLDGPPWETEEAYNL HHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VARLADRITDDNGKEWLGLALTELKDPLLPKASVLARDRYLAAFRATANLAGLADETQAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QILDHTKVLIPREPGAYRRTDDDQVDVLLTLARRSGETGDEAFEQLCAGLLLNAQLGHRI HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LSHGGALLRSRVRDVERHLSDQARAGNVQAALALVVADADTTPSDDLAWTMYHRAVHPGG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCC ETGGTELDHQGVALLVTTLGEAEAEAFAAAMLTLARDPQQSATDRETALQAVMTIARSLP CCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC DEARTAAFCTVAELAAGRYDSSTSDWNLHGKDDLLARIRIKFGGSSLIAPAALWAAAALA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHH TSDADYETVQQLADALLAGVDDSSADTIGKALAQIPFEQFHVGPGPGTGHPSAVIRAIAA CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH IKWARSDRRDPAVGARFAKDQDGSVRLSLAQALRKNPHPEVEAILSNDVRRTVRTAMHRS HHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure SDENQVPEQHDRIGPPAGAVISKKDRDAVLNLCAERYGERVSANWLLDALDVPVGRRPS CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC WESATSIIWWNQMLAILEFGIIVDPHRKLIAKMRDEFPGDSTVGRLAETYLSAENRHEAI CHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC PPNGRNVVADAILKDTLAAHGLTKKVAEARKSTASDPERAAELFASIAQQLDLSSFHLHA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEC DGFRSRQASTLQAAGRSNDAAVVRISLGWRLLQRCDQWGAMSEAADLEKIESQLDEPIRR CCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SAIALARAVEFGRERDVTLDAVAMTFDDLRSGDQGEFEAALLLAERAVAWRQLEIVRTRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLRRLAEDAPDSGNTAEAVVRLLMCLADASGEWPKLARKAKREYAKPLRAWVLARHARH HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALSEQPDHAVERWEEAASLAAKKKLHSDAADWLYAARTVLALYGRSFDSDGDPNEYHRV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AQAARVRGDRSVLRRPFPMRERVLDRMASGKWPDAFEALQQLLWHSTVIGDWNGELTTHE HHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHH NFGRLFEEAGDPLLASEHYLKSNSHKELKKIRSKFKEAAIVLPTILLDGPPWETEEAYNL HHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VARLADRITDDNGKEWLGLALTELKDPLLPKASVLARDRYLAAFRATANLAGLADETQAR HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH QILDHTKVLIPREPGAYRRTDDDQVDVLLTLARRSGETGDEAFEQLCAGLLLNAQLGHRI HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LSHGGALLRSRVRDVERHLSDQARAGNVQAALALVVADADTTPSDDLAWTMYHRAVHPGG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCC ETGGTELDHQGVALLVTTLGEAEAEAFAAAMLTLARDPQQSATDRETALQAVMTIARSLP CCCCCCCCCCCCEEEEEHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC DEARTAAFCTVAELAAGRYDSSTSDWNLHGKDDLLARIRIKFGGSSLIAPAALWAAAALA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHH TSDADYETVQQLADALLAGVDDSSADTIGKALAQIPFEQFHVGPGPGTGHPSAVIRAIAA CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHH IKWARSDRRDPAVGARFAKDQDGSVRLSLAQALRKNPHPEVEAILSNDVRRTVRTAMHRS HHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA