| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314491
Identifier: 158314491
GI number: 158314491
Start: 3151211
End: 3151819
Strand: Direct
Name: 158314491
Synonym: Franean1_2664
Alternate gene names: NA
Gene position: 3151211-3151819 (Clockwise)
Preceding gene: 158314489
Following gene: 158314492
Centisome position: 35.08
GC content: 69.79
Gene sequence:
>609_bases ATGGTTCGCCGCTTCCAGGCGGCCGGGCCGTGCCGGCCCCAGCTCGATTACATGATCCCAGCGGTGTCACGATTGCCGGA CGTTCCCGACCTCAGCGAACGACACCGAGCTCACCCCCACCGGCCGCACGATCACGGTCCTGTGGGCGTGATCCGACGCG GCGCAGCCCCGAAAGGCTGGCACGCTGACCTGTCCACGTCGACGGACGGAACCCCCACCGACCCGACCGGCGGCATCGCC GTATGCGTCGCCGACCGCGACCTCGTCGCCCGCACCATCGACCACCTGACCGCCCACGGCCACACCTGCGCCGAGCTCAC CAAGGACAGCGCCCAGGGCGACGATGAGATCCGCGTCGGCACCAAGCGCCGTTTCAAGGCCCTCGATTGCCAGAACCTCC CCATCATCGCCACCAGCGACGGCATCATCCCCAGGGCCGCCATCCACCGCCACGCCACCGACGACCCCACCCGCTACATC CACGAACTCCGCAAAGGCTGCTCCCTCCTCTTTGTAGCCGCCGCCCGAGTCCGCGACCCCCTTACCATCACCTGGTACGG CCCCCGCAGCCCTCTGCCGCTACCTCCCCAGGCACGGGGCGCCGGATGA
Upstream 100 bases:
>100_bases TGCAGCGCAACCGGATGAGATCGCCGGCTGGCCGTGGTGATAAATGCGTAGGGTTGAGGCATCGTGATCGGTGCCGTCTG GCCTGGGAGTGTGACGATCG
Downstream 100 bases:
>100_bases GCGATGAGAACCAGGTACCGGAACAGCACGACCGAATCGGCCCACCTGCTGGCGCCGTCATTTCCAAGAAGGACCGCGAC GCGGTCCTGAATCTGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Helicase
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MVRRFQAAGPCRPQLDYMIPAVSRLPDVPDLSERHRAHPHRPHDHGPVGVIRRGAAPKGWHADLSTSTDGTPTDPTGGIA VCVADRDLVARTIDHLTAHGHTCAELTKDSAQGDDEIRVGTKRRFKALDCQNLPIIATSDGIIPRAAIHRHATDDPTRYI HELRKGCSLLFVAAARVRDPLTITWYGPRSPLPLPPQARGAG
Sequences:
>Translated_202_residues MVRRFQAAGPCRPQLDYMIPAVSRLPDVPDLSERHRAHPHRPHDHGPVGVIRRGAAPKGWHADLSTSTDGTPTDPTGGIA VCVADRDLVARTIDHLTAHGHTCAELTKDSAQGDDEIRVGTKRRFKALDCQNLPIIATSDGIIPRAAIHRHATDDPTRYI HELRKGCSLLFVAAARVRDPLTITWYGPRSPLPLPPQARGAG >Mature_202_residues MVRRFQAAGPCRPQLDYMIPAVSRLPDVPDLSERHRAHPHRPHDHGPVGVIRRGAAPKGWHADLSTSTDGTPTDPTGGIA VCVADRDLVARTIDHLTAHGHTCAELTKDSAQGDDEIRVGTKRRFKALDCQNLPIIATSDGIIPRAAIHRHATDDPTRYI HELRKGCSLLFVAAARVRDPLTITWYGPRSPLPLPPQARGAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22014; Mature: 22014
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRFQAAGPCRPQLDYMIPAVSRLPDVPDLSERHRAHPHRPHDHGPVGVIRRGAAPKGW CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCC HADLSTSTDGTPTDPTGGIAVCVADRDLVARTIDHLTAHGHTCAELTKDSAQGDDEIRVG CCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEC TKRRFKALDCQNLPIIATSDGIIPRAAIHRHATDDPTRYIHELRKGCSLLFVAAARVRDP CHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCHHEEEHHHHHHCCC LTITWYGPRSPLPLPPQARGAG EEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MVRRFQAAGPCRPQLDYMIPAVSRLPDVPDLSERHRAHPHRPHDHGPVGVIRRGAAPKGW CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCC HADLSTSTDGTPTDPTGGIAVCVADRDLVARTIDHLTAHGHTCAELTKDSAQGDDEIRVG CCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEC TKRRFKALDCQNLPIIATSDGIIPRAAIHRHATDDPTRYIHELRKGCSLLFVAAARVRDP CHHHHHCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHCHHEEEHHHHHHCCC LTITWYGPRSPLPLPPQARGAG EEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA