| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158314487
Identifier: 158314487
GI number: 158314487
Start: 3146137
End: 3147921
Strand: Direct
Name: 158314487
Synonym: Franean1_2660
Alternate gene names: NA
Gene position: 3146137-3147921 (Clockwise)
Preceding gene: 158314486
Following gene: 158314489
Centisome position: 35.03
GC content: 60.0
Gene sequence:
>1785_bases ATGGGCTGGCAGTGTGGAGCCCGTTCCGTGGAGCTAACAGAACAGCCGCATTTGACTAATTCTCGGTCAGCGACGTGGGT AAGTTCGGAGAATGTGACCCCGAATTTAGCCGGCTCGCTTGGTGTTCTGCTGGCTCGCTTCGCCTTCACGCAGGACCAGC TGCTACGGTCAGATGCCTTCATTAGGTTGGCTAAGGATCGGGGTCACAGTCTCGACCGGGTTACGCTTCAGCGTCTCCAC GGTGGCGGTCTGCTTGTGCCCTTCTACCGTGTCAGCGAGACGGCGGTGATCGGCCGCAGTCTCCCCGTCGAGCCGAATGG CAACCTTAATGCCCGTCGTGAAGCGCTCAACGCTGCTGTGGATGGCCGCCTCCGTGACTGCGCTGACGAGGGTTACTCCG CTGCCTGGCCATATGTCCGGCCGCCGGGCGAGATGGATCCGCGATGGCGGGACGGATTTTACTTTTCCTCGTGGCAGCTG ACCGATCTTCACCAGGCTCTTAGCGATGAGCGGTGGCTAAGGTTTGGGATGCCAGCCGCCGAGTACCAGATTCGTGCCCA TAGCCGCCGCGCGCGGGCCACTGCGCTTGCAGTGCTTGCATTGCGGTACTTGCCGGGCATCCTCGGTCGACTCTCAGTGC CGCCAGGTGTGGACACCGGAGTGTTGCGTAGCCTCGAAATGGAACGCAATGTGTCAGAGCTGCTCGCGATGGTCGATGTA CCCCCGGAAGAACTTTGGCCTATGGCCGAAGATCTGCTTCTTCACGCTGGCTTCCGTGACCCGCTCCGGGATTGGCTACC AATCATACGGCACGCTAACTACGGCGCCTGGTCCAAGCTGCGTGGTGTAGCGCTGGATTGTCTGTGGCAGCGCATCGCGG CCGAAGTGCTATTGCGCGCCCATGACGACTTGGCTGCGGCCGGCGAAGCTGAGCCGCTCCCCGACATCACCTCTCGGCTG GTACGTCACCCTCTGCAGGACCGGCTGGGTCGGGCGTCAACGACTGGTGAACCGCTTGACAAGGTACTAGGACGATTCGG CCTCTCGCCGCACCCTCGGGTGCTACTGCTGGTTGAAGGTGAGACTGAACTCGTCCATCTGCCGCAACTTTTGGCTGCAT TCGGTCTAGACCGACCCGACCTCGTCCGTGTACAGCAGGCAAAGGGTTCGCAAGTCAGCCCGCAACTACTGGCTCGGTAT GCAATTAGCCCGCGTCTTGCCGAGCGTTTCCCTGACGGCTCTTGGCAGCCGGTAGCCACTCCGACTGCCCTAGTGATCGC TATGGATCCTGAGAAGCTTTGGGAAACCGAGCAGAAGCGAGAGCGTCAACGTCGGGCGATCTGCGGCGCCATCCGCCAGG AGGTTGAGCTCAAGGGCGGTACTATTTCTGACGAGCAGCTTGATATTTTGGTCAGCATCCACGTATGGGGTGATCTGACG TACGAGCTGGCGAACTTTACCGACGAGGAGTTGGCCGATGCTTTAGCTAAACTAGCACGAGGAACCAGCGACGCTGATCG TGGTTCAACGTCCTGGCGCCATCGAATTGCCACCGAGCTTGCCGCGACCCGGGAGAATCGCGCGAACATCGACGCGGTTA TAGGAAAGATGCGGGTGAAAAAGCCGGATCTGGCGGAAGCGCTCACCGTAGCCCTGCTCGAAAAATGTGAGCAGGAGCTG GCGTCGGGAAATGTACTAACGCCAGTACTTAAGGTGCTGGTTGAAGTTGAGCTTTTAGTGCATCTTCTCTCCGGTGGGAC GTATGTGTTTCCGCCGGCGCCCTGA
Upstream 100 bases:
>100_bases TGGTGGAGGCCTGGGTCCTTCTCAATCATTACCTGGAGCTGCTGATCCTTCGCTGGGTTGGCTACAGCGGTCAGATTCAA GATACTTCGATCATTGATGG
Downstream 100 bases:
>100_bases TTCCAAGAAGTGGTGGTTCCAGTCCGTGATCGGCGGTGAATCGTACCGATCCGGTGCGTCTAGCGAGCGAGGCGTGACTG CAAGCCTTACCGGTCGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MGWQCGARSVELTEQPHLTNSRSATWVSSENVTPNLAGSLGVLLARFAFTQDQLLRSDAFIRLAKDRGHSLDRVTLQRLH GGGLLVPFYRVSETAVIGRSLPVEPNGNLNARREALNAAVDGRLRDCADEGYSAAWPYVRPPGEMDPRWRDGFYFSSWQL TDLHQALSDERWLRFGMPAAEYQIRAHSRRARATALAVLALRYLPGILGRLSVPPGVDTGVLRSLEMERNVSELLAMVDV PPEELWPMAEDLLLHAGFRDPLRDWLPIIRHANYGAWSKLRGVALDCLWQRIAAEVLLRAHDDLAAAGEAEPLPDITSRL VRHPLQDRLGRASTTGEPLDKVLGRFGLSPHPRVLLLVEGETELVHLPQLLAAFGLDRPDLVRVQQAKGSQVSPQLLARY AISPRLAERFPDGSWQPVATPTALVIAMDPEKLWETEQKRERQRRAICGAIRQEVELKGGTISDEQLDILVSIHVWGDLT YELANFTDEELADALAKLARGTSDADRGSTSWRHRIATELAATRENRANIDAVIGKMRVKKPDLAEALTVALLEKCEQEL ASGNVLTPVLKVLVEVELLVHLLSGGTYVFPPAP
Sequences:
>Translated_594_residues MGWQCGARSVELTEQPHLTNSRSATWVSSENVTPNLAGSLGVLLARFAFTQDQLLRSDAFIRLAKDRGHSLDRVTLQRLH GGGLLVPFYRVSETAVIGRSLPVEPNGNLNARREALNAAVDGRLRDCADEGYSAAWPYVRPPGEMDPRWRDGFYFSSWQL TDLHQALSDERWLRFGMPAAEYQIRAHSRRARATALAVLALRYLPGILGRLSVPPGVDTGVLRSLEMERNVSELLAMVDV PPEELWPMAEDLLLHAGFRDPLRDWLPIIRHANYGAWSKLRGVALDCLWQRIAAEVLLRAHDDLAAAGEAEPLPDITSRL VRHPLQDRLGRASTTGEPLDKVLGRFGLSPHPRVLLLVEGETELVHLPQLLAAFGLDRPDLVRVQQAKGSQVSPQLLARY AISPRLAERFPDGSWQPVATPTALVIAMDPEKLWETEQKRERQRRAICGAIRQEVELKGGTISDEQLDILVSIHVWGDLT YELANFTDEELADALAKLARGTSDADRGSTSWRHRIATELAATRENRANIDAVIGKMRVKKPDLAEALTVALLEKCEQEL ASGNVLTPVLKVLVEVELLVHLLSGGTYVFPPAP >Mature_593_residues GWQCGARSVELTEQPHLTNSRSATWVSSENVTPNLAGSLGVLLARFAFTQDQLLRSDAFIRLAKDRGHSLDRVTLQRLHG GGLLVPFYRVSETAVIGRSLPVEPNGNLNARREALNAAVDGRLRDCADEGYSAAWPYVRPPGEMDPRWRDGFYFSSWQLT DLHQALSDERWLRFGMPAAEYQIRAHSRRARATALAVLALRYLPGILGRLSVPPGVDTGVLRSLEMERNVSELLAMVDVP PEELWPMAEDLLLHAGFRDPLRDWLPIIRHANYGAWSKLRGVALDCLWQRIAAEVLLRAHDDLAAAGEAEPLPDITSRLV RHPLQDRLGRASTTGEPLDKVLGRFGLSPHPRVLLLVEGETELVHLPQLLAAFGLDRPDLVRVQQAKGSQVSPQLLARYA ISPRLAERFPDGSWQPVATPTALVIAMDPEKLWETEQKRERQRRAICGAIRQEVELKGGTISDEQLDILVSIHVWGDLTY ELANFTDEELADALAKLARGTSDADRGSTSWRHRIATELAATRENRANIDAVIGKMRVKKPDLAEALTVALLEKCEQELA SGNVLTPVLKVLVEVELLVHLLSGGTYVFPPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65881; Mature: 65750
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWQCGARSVELTEQPHLTNSRSATWVSSENVTPNLAGSLGVLLARFAFTQDQLLRSDAF CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRLAKDRGHSLDRVTLQRLHGGGLLVPFYRVSETAVIGRSLPVEPNGNLNARREALNAAV EEEHHHCCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHH DGRLRDCADEGYSAAWPYVRPPGEMDPRWRDGFYFSSWQLTDLHQALSDERWLRFGMPAA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHHHHHHHCCCCHHHHCCCHH EYQIRAHSRRARATALAVLALRYLPGILGRLSVPPGVDTGVLRSLEMERNVSELLAMVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCC PPEELWPMAEDLLLHAGFRDPLRDWLPIIRHANYGAWSKLRGVALDCLWQRIAAEVLLRA CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HDDLAAAGEAEPLPDITSRLVRHPLQDRLGRASTTGEPLDKVLGRFGLSPHPRVLLLVEG CCCHHCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC ETELVHLPQLLAAFGLDRPDLVRVQQAKGSQVSPQLLARYAISPRLAERFPDGSWQPVAT CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCC PTALVIAMDPEKLWETEQKRERQRRAICGAIRQEVELKGGTISDEQLDILVSIHVWGDLT CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHH YELANFTDEELADALAKLARGTSDADRGSTSWRHRIATELAATRENRANIDAVIGKMRVK HHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC KPDLAEALTVALLEKCEQELASGNVLTPVLKVLVEVELLVHLLSGGTYVFPPAP CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCC >Mature Secondary Structure GWQCGARSVELTEQPHLTNSRSATWVSSENVTPNLAGSLGVLLARFAFTQDQLLRSDAF CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IRLAKDRGHSLDRVTLQRLHGGGLLVPFYRVSETAVIGRSLPVEPNGNLNARREALNAAV EEEHHHCCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHH DGRLRDCADEGYSAAWPYVRPPGEMDPRWRDGFYFSSWQLTDLHQALSDERWLRFGMPAA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHHHHHHHCCCCHHHHCCCHH EYQIRAHSRRARATALAVLALRYLPGILGRLSVPPGVDTGVLRSLEMERNVSELLAMVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCC PPEELWPMAEDLLLHAGFRDPLRDWLPIIRHANYGAWSKLRGVALDCLWQRIAAEVLLRA CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HDDLAAAGEAEPLPDITSRLVRHPLQDRLGRASTTGEPLDKVLGRFGLSPHPRVLLLVEG CCCHHCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECC ETELVHLPQLLAAFGLDRPDLVRVQQAKGSQVSPQLLARYAISPRLAERFPDGSWQPVAT CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCC PTALVIAMDPEKLWETEQKRERQRRAICGAIRQEVELKGGTISDEQLDILVSIHVWGDLT CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHH YELANFTDEELADALAKLARGTSDADRGSTSWRHRIATELAATRENRANIDAVIGKMRVK HHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC KPDLAEALTVALLEKCEQELASGNVLTPVLKVLVEVELLVHLLSGGTYVFPPAP CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA