Click here to switch to the map view.

The map label for this gene is yopA [H]

Identifier: 158314486

GI number: 158314486

Start: 3144758

End: 3146173

Strand: Direct

Name: yopA [H]

Synonym: Franean1_2659

Alternate gene names: 158314486

Gene position: 3144758-3146173 (Clockwise)

Preceding gene: 158314485

Following gene: 158314487

Centisome position: 35.01

GC content: 60.73

Gene sequence:

>1416_bases
ATGACCGACCTGCAATCTGCTCCTACCGATGGCGACCCTGAGATATCCCCTCGCCGGCCGACCATAGAGCCTTCTGACGC
TGACCCCCGCTTGCTATCGCTAAGCCGATCAAGTGCGGATGACGTTCTATATCGAGGTCGTGCTGTTGAGCAGCACACCG
GCCACGAGTGTGACTTCGAGGTCCTCGCTCGCTGGGGCGTGAAGCAGGACATCCGCTGGACCGCCCGGTTCGACACCCCG
GTGCTGGAACGTTACTTCGGCGGTCCCGACGAACTGGCATTTGTTCTGCGGGATCAGAACTTTGGCAACGGTTACCTGAT
TGACAGGGCGCACCTCAGTAATCGTGACGTCGACAGTCTCGCTGGTTGGCTAGACAGCGGGAGGATTGTCGGGCAGGTTG
ACAGGGAAGTTGATTCAGTCGAAGTCCCCTGGGTTAACCTCTCGGATGCCGGTCGAGTCTCTGGTACTGCGTTGCGCCTG
CTCGGTGGGGAGAGCCCCGGACAGTGCCGCGTCTGGCGGGGGCGGGAGGTCTGGCGTCTCGGTGACTGGGAGATGACCGT
CGATGCGCGGCCGGACCTTGCGGGCGTTGTGGACGAGCTTAAGAATCACGGTGGTCACGCCGTAACGCATTTGTCTGTGC
TCCGTCGCGTCGACGGTGGCACGTTTGTTGCCACCGACGTGACACCAGTCCTGCGGGCATTCCATCAGGCGGTCGCATTC
GCGCTCGGTCGCGAAGCCGCACCAGGACCTGCCTCGGCGCGTGCTGCGGATGGCTCACTCGTGTGGCGTGAATGGTCAGT
GCGCAGGGCGGATCAGATGGGCGGGGTAACAGCATGGTGGCATCCGAACGCCTGCCCGATGGGCGAAGTTACAAATCTTG
TCGGCGCTAAGCTTCTTGATCCACAGTATGGGCGGAACGCCTCGCACATCCTCCAGGGCTACGTCCTGTCCAAGCGTGGG
GGCTTCGTCGAGCAGCGTATTACTGTCGGCTTCTCTACGATCGAGCAGCTCTGCTGGCAAGTGAAGGTGTTCGAAGAGGG
TGTAGATTCGGAACGATATGATAAGAAGAAGGCTGCCCAGCGGCTGCGTGGCCTCCTTGTAGATGGATCCCTTCCGAGCC
AGCCAAAAATTCCCGATCATCTCCATGTGCTCCAGCAGTTCGCAAAAGATGAGGGTGATCCCACGGCAGCCCTCGATGGG
CCTGCAGCGGTCACGGAGGTCCGCCACCGGCTCGTGCACCCCAAGAGTCCGGCCGATCTATACGGCCGACCGGGTCTCTT
GGTGGAGGCCTGGGTCCTTCTCAATCATTACCTGGAGCTGCTGATCCTTCGCTGGGTTGGCTACAGCGGTCAGATTCAAG
ATACTTCGATCATTGATGGATGGGCTGGCAGTGTGGAGCCCGTTCCGTGGAGCTAA

Upstream 100 bases:

>100_bases
TGACGGTCAGCTTGCCATCTAAATGTCCGTGCCCGCTGAAGCCGTCCTGCCTGAAATTAGCTTGACCTCCACGACTCCGA
ACTGACAACCTGGATCAATA

Downstream 100 bases:

>100_bases
CAGAACAGCCGCATTTGACTAATTCTCGGTCAGCGACGTGGGTAAGTTCGGAGAATGTGACCCCGAATTTAGCCGGCTCG
CTTGGTGTTCTGCTGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTDLQSAPTDGDPEISPRRPTIEPSDADPRLLSLSRSSADDVLYRGRAVEQHTGHECDFEVLARWGVKQDIRWTARFDTP
VLERYFGGPDELAFVLRDQNFGNGYLIDRAHLSNRDVDSLAGWLDSGRIVGQVDREVDSVEVPWVNLSDAGRVSGTALRL
LGGESPGQCRVWRGREVWRLGDWEMTVDARPDLAGVVDELKNHGGHAVTHLSVLRRVDGGTFVATDVTPVLRAFHQAVAF
ALGREAAPGPASARAADGSLVWREWSVRRADQMGGVTAWWHPNACPMGEVTNLVGAKLLDPQYGRNASHILQGYVLSKRG
GFVEQRITVGFSTIEQLCWQVKVFEEGVDSERYDKKKAAQRLRGLLVDGSLPSQPKIPDHLHVLQQFAKDEGDPTAALDG
PAAVTEVRHRLVHPKSPADLYGRPGLLVEAWVLLNHYLELLILRWVGYSGQIQDTSIIDGWAGSVEPVPWS

Sequences:

>Translated_471_residues
MTDLQSAPTDGDPEISPRRPTIEPSDADPRLLSLSRSSADDVLYRGRAVEQHTGHECDFEVLARWGVKQDIRWTARFDTP
VLERYFGGPDELAFVLRDQNFGNGYLIDRAHLSNRDVDSLAGWLDSGRIVGQVDREVDSVEVPWVNLSDAGRVSGTALRL
LGGESPGQCRVWRGREVWRLGDWEMTVDARPDLAGVVDELKNHGGHAVTHLSVLRRVDGGTFVATDVTPVLRAFHQAVAF
ALGREAAPGPASARAADGSLVWREWSVRRADQMGGVTAWWHPNACPMGEVTNLVGAKLLDPQYGRNASHILQGYVLSKRG
GFVEQRITVGFSTIEQLCWQVKVFEEGVDSERYDKKKAAQRLRGLLVDGSLPSQPKIPDHLHVLQQFAKDEGDPTAALDG
PAAVTEVRHRLVHPKSPADLYGRPGLLVEAWVLLNHYLELLILRWVGYSGQIQDTSIIDGWAGSVEPVPWS
>Mature_470_residues
TDLQSAPTDGDPEISPRRPTIEPSDADPRLLSLSRSSADDVLYRGRAVEQHTGHECDFEVLARWGVKQDIRWTARFDTPV
LERYFGGPDELAFVLRDQNFGNGYLIDRAHLSNRDVDSLAGWLDSGRIVGQVDREVDSVEVPWVNLSDAGRVSGTALRLL
GGESPGQCRVWRGREVWRLGDWEMTVDARPDLAGVVDELKNHGGHAVTHLSVLRRVDGGTFVATDVTPVLRAFHQAVAFA
LGREAAPGPASARAADGSLVWREWSVRRADQMGGVTAWWHPNACPMGEVTNLVGAKLLDPQYGRNASHILQGYVLSKRGG
FVEQRITVGFSTIEQLCWQVKVFEEGVDSERYDKKKAAQRLRGLLVDGSLPSQPKIPDHLHVLQQFAKDEGDPTAALDGP
AAVTEVRHRLVHPKSPADLYGRPGLLVEAWVLLNHYLELLILRWVGYSGQIQDTSIIDGWAGSVEPVPWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52037; Mature: 51906

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLQSAPTDGDPEISPRRPTIEPSDADPRLLSLSRSSADDVLYRGRAVEQHTGHECDFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCHHHCCCCCCCHH
VLARWGVKQDIRWTARFDTPVLERYFGGPDELAFVLRDQNFGNGYLIDRAHLSNRDVDSL
HHHHCCCCCCCEEEEECCCHHHHHHCCCHHHEEEEEECCCCCCCEEEEECCCCCCCHHHH
AGWLDSGRIVGQVDREVDSVEVPWVNLSDAGRVSGTALRLLGGESPGQCRVWRGREVWRL
HHHHHCCCEEEECCCCCCCEECCEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEE
GDWEMTVDARPDLAGVVDELKNHGGHAVTHLSVLRRVDGGTFVATDVTPVLRAFHQAVAF
CCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
ALGREAAPGPASARAADGSLVWREWSVRRADQMGGVTAWWHPNACPMGEVTNLVGAKLLD
HHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC
PQYGRNASHILQGYVLSKRGGFVEQRITVGFSTIEQLCWQVKVFEEGVDSERYDKKKAAQ
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RLRGLLVDGSLPSQPKIPDHLHVLQQFAKDEGDPTAALDGPAAVTEVRHRLVHPKSPADL
HHHCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH
YGRPGLLVEAWVLLNHYLELLILRWVGYSGQIQDTSIIDGWAGSVEPVPWS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
TDLQSAPTDGDPEISPRRPTIEPSDADPRLLSLSRSSADDVLYRGRAVEQHTGHECDFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCHHHCCCCCCCHH
VLARWGVKQDIRWTARFDTPVLERYFGGPDELAFVLRDQNFGNGYLIDRAHLSNRDVDSL
HHHHCCCCCCCEEEEECCCHHHHHHCCCHHHEEEEEECCCCCCCEEEEECCCCCCCHHHH
AGWLDSGRIVGQVDREVDSVEVPWVNLSDAGRVSGTALRLLGGESPGQCRVWRGREVWRL
HHHHHCCCEEEECCCCCCCEECCEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEE
GDWEMTVDARPDLAGVVDELKNHGGHAVTHLSVLRRVDGGTFVATDVTPVLRAFHQAVAF
CCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
ALGREAAPGPASARAADGSLVWREWSVRRADQMGGVTAWWHPNACPMGEVTNLVGAKLLD
HHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC
PQYGRNASHILQGYVLSKRGGFVEQRITVGFSTIEQLCWQVKVFEEGVDSERYDKKKAAQ
CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RLRGLLVDGSLPSQPKIPDHLHVLQQFAKDEGDPTAALDGPAAVTEVRHRLVHPKSPADL
HHHCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH
YGRPGLLVEAWVLLNHYLELLILRWVGYSGQIQDTSIIDGWAGSVEPVPWS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]