| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314372
Identifier: 158314372
GI number: 158314372
Start: 3024218
End: 3025090
Strand: Direct
Name: 158314372
Synonym: Franean1_2544
Alternate gene names: NA
Gene position: 3024218-3025090 (Clockwise)
Preceding gene: 158314370
Following gene: 158314373
Centisome position: 33.67
GC content: 77.55
Gene sequence:
>873_bases ATGCCCGACGGAATGTCTTCCTTTCCTGCGCTCCCGGCCGGCCGGGGCGCGCCCGCGTTGCCGCTGGCGACATTGCGGGA CTGCTTTGGCCTGCTGGTGACCGGGCCGGCGCCGTTGGCGCTGGACGGGTCGGTCGTGGCGGGTCTGCCGGCACGGCTGG TGGCATTGGACGAGCTGCGCGACCTGCTGCTGGCCGGTTCCTGCCCGCAAGCCGTCCGCGACGCCGCGTGGGCGGTGGTG ATCCGCCGCTCGCGGCGCTACGGCGGTGCGTGGACGGTCGGCGCCGCCGGGATGGCGCTGCCCGCCCTGCACGCGGTCTG CACGCGGCTCGGCGGCCACAGCGACCTCGACACCGCCGATGTGCAGGCCGAGGTGCTCACCGGGTTCCTCGAAGCGGCGG CCACGGTCCGCCTGGACCTGCCGCGGATCGCGGTGCGGCTGCGCTGGGCCGCCTACCGGGCCGGGCTGGCGCTGACCGTC CAGCAGCGGGAGGCCCCGCGTCCCGACCCGGACCTGTTCCAGACCGTCGCCGCGGCCGAGGCCGCGCGGTCCGGTCCGGG CCAGGCCGGTCCCGAACAGGTCCTGGCGGACGCGGTCGCCGCCGGCGTCCTGACCGACACCGAAGCCGATCTGATCGCCG CGACCCGCCTGGACGACCTCCCGATCAGCGCCTGGGCCGCCCGCCACGCAACGGCGCCCCGCCGTGCTTCTCGGCTACGC GAACGGGCCGAGCAGCGCCTCGTCGGCCACCTCACCGACCCGGCCGGTGCCAGCCGCGCCCCGCGCTCGCCGGCCGGCGA GCCCCCGCACCGGCCCCACCCACCGGGCGCGGTCGGTGTCCCGGCGCTGGCGGTCGCGGGGGTGCAGGCATGA
Upstream 100 bases:
>100_bases TTGCTGTGCATTCACTGGGAGATCATTCTGGCTTTTTGCTGGGCACGGTATGGAGTCCTTGGTGCTGTCCGAATTTCCGT GACAGCGAAGGACGGCTCTC
Downstream 100 bases:
>100_bases GCCCGACGCGACCGCGCCCAGTGGCCCGTCCCGCCCGTTCCCGCACGGCCGGCCGGCGCGCGGTGGTGCGCCGGGCGGCC TTGCTCTCCGCGGTCGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPDGMSSFPALPAGRGAPALPLATLRDCFGLLVTGPAPLALDGSVVAGLPARLVALDELRDLLLAGSCPQAVRDAAWAVV IRRSRRYGGAWTVGAAGMALPALHAVCTRLGGHSDLDTADVQAEVLTGFLEAAATVRLDLPRIAVRLRWAAYRAGLALTV QQREAPRPDPDLFQTVAAAEAARSGPGQAGPEQVLADAVAAGVLTDTEADLIAATRLDDLPISAWAARHATAPRRASRLR ERAEQRLVGHLTDPAGASRAPRSPAGEPPHRPHPPGAVGVPALAVAGVQA
Sequences:
>Translated_290_residues MPDGMSSFPALPAGRGAPALPLATLRDCFGLLVTGPAPLALDGSVVAGLPARLVALDELRDLLLAGSCPQAVRDAAWAVV IRRSRRYGGAWTVGAAGMALPALHAVCTRLGGHSDLDTADVQAEVLTGFLEAAATVRLDLPRIAVRLRWAAYRAGLALTV QQREAPRPDPDLFQTVAAAEAARSGPGQAGPEQVLADAVAAGVLTDTEADLIAATRLDDLPISAWAARHATAPRRASRLR ERAEQRLVGHLTDPAGASRAPRSPAGEPPHRPHPPGAVGVPALAVAGVQA >Mature_289_residues PDGMSSFPALPAGRGAPALPLATLRDCFGLLVTGPAPLALDGSVVAGLPARLVALDELRDLLLAGSCPQAVRDAAWAVVI RRSRRYGGAWTVGAAGMALPALHAVCTRLGGHSDLDTADVQAEVLTGFLEAAATVRLDLPRIAVRLRWAAYRAGLALTVQ QREAPRPDPDLFQTVAAAEAARSGPGQAGPEQVLADAVAAGVLTDTEADLIAATRLDDLPISAWAARHATAPRRASRLRE RAEQRLVGHLTDPAGASRAPRSPAGEPPHRPHPPGAVGVPALAVAGVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29870; Mature: 29739
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGMSSFPALPAGRGAPALPLATLRDCFGLLVTGPAPLALDGSVVAGLPARLVALDELR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHCCHHHHHHHHHHH DLLLAGSCPQAVRDAAWAVVIRRSRRYGGAWTVGAAGMALPALHAVCTRLGGHSDLDTAD HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHH VQAEVLTGFLEAAATVRLDLPRIAVRLRWAAYRAGLALTVQQREAPRPDPDLFQTVAAAE HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHH AARSGPGQAGPEQVLADAVAAGVLTDTEADLIAATRLDDLPISAWAARHATAPRRASRLR HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH ERAEQRLVGHLTDPAGASRAPRSPAGEPPHRPHPPGAVGVPALAVAGVQA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure PDGMSSFPALPAGRGAPALPLATLRDCFGLLVTGPAPLALDGSVVAGLPARLVALDELR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHCCHHHHHHHHHHH DLLLAGSCPQAVRDAAWAVVIRRSRRYGGAWTVGAAGMALPALHAVCTRLGGHSDLDTAD HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHH VQAEVLTGFLEAAATVRLDLPRIAVRLRWAAYRAGLALTVQQREAPRPDPDLFQTVAAAE HHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHH AARSGPGQAGPEQVLADAVAAGVLTDTEADLIAATRLDDLPISAWAARHATAPRRASRLR HHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH ERAEQRLVGHLTDPAGASRAPRSPAGEPPHRPHPPGAVGVPALAVAGVQA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA