Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314373

Identifier: 158314373

GI number: 158314373

Start: 3025087

End: 3025488

Strand: Direct

Name: 158314373

Synonym: Franean1_2545

Alternate gene names: NA

Gene position: 3025087-3025488 (Clockwise)

Preceding gene: 158314372

Following gene: 158314374

Centisome position: 33.68

GC content: 71.64

Gene sequence:

>402_bases
ATGAGCCCGACGCGACCGCGCCCAGTGGCCCGTCCCGCCCGTTCCCGCACGGCCGGCCGGCGCGCGGTGGTGCGCCGGGC
GGCCTTGCTCTCCGCGGTCGTGCTGGTGCTCGTCCTCGCCGGCAGCGTCACGGCCTTCGCCCAAGTGCCCGACCCCGGGG
TGCCGGTGGCACCGGATCTGAACACGGTCCTGAACAACATCCGCAACTGGATCATGGGGAGCCTGGCGTTGCTGGCGACG
GTGTTCCTCTCGATCGGCGGCGTGCGCTACGTGATCGCCAACGGGGAGCCGGGCGAGGTCGGCAAGGCGAAAGACTCCTT
CCGTAACGCCGGCTACGGCTATGGGCTCGCCGCGCTCGCGCCGGTCGTCGTCGAGGTCCTCAAGCAGATCGTCGGGGGCT
AG

Upstream 100 bases:

>100_bases
CCAGCCGCGCCCCGCGCTCGCCGGCCGGCGAGCCCCCGCACCGGCCCCACCCACCGGGCGCGGTCGGTGTCCCGGCGCTG
GCGGTCGCGGGGGTGCAGGC

Downstream 100 bases:

>100_bases
GCCGTGACCGCCGCCGTCCCCGCACGCCGCATCCTCCCGTCGGGTACGCCAGGTTCTCTGCCCGCCCAGGCGCGCCGCTG
GCCGGGCCTGCCTCGGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLAT
VFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG

Sequences:

>Translated_133_residues
MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLAT
VFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG
>Mature_132_residues
SPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDLNTVLNNIRNWIMGSLALLATV
FLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALAPVVVEVLKQIVGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13797; Mature: 13666

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH
NTVLNNIRNWIMGSLALLATVFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHH
PVVVEVLKQIVGG
HHHHHHHHHHHCC
>Mature Secondary Structure 
SPTRPRPVARPARSRTAGRRAVVRRAALLSAVVLVLVLAGSVTAFAQVPDPGVPVAPDL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCH
NTVLNNIRNWIMGSLALLATVFLSIGGVRYVIANGEPGEVGKAKDSFRNAGYGYGLAALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHH
PVVVEVLKQIVGG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA