| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314307
Identifier: 158314307
GI number: 158314307
Start: 2952942
End: 2954189
Strand: Direct
Name: 158314307
Synonym: Franean1_2477
Alternate gene names: NA
Gene position: 2952942-2954189 (Clockwise)
Preceding gene: 158314303
Following gene: 158314309
Centisome position: 32.88
GC content: 68.03
Gene sequence:
>1248_bases GTGCGTGTGAGATCGGGGCCCGGCTTCGGGTGGCTGTGGTCGGCCTACGCCGTCAGTACATACGGCACGTGGATCGCTTT CGGGGCGTTCCCGCTCATCGCGGTCCGGGTGCTGCACTCGTCGGCATTCGCCGTCTCGTTCCTGGGAGCAGCCGGCCTCG CTGTCGCCGCGATCGTCGCGGTCCCGCTCGGGCCGTGGATCGAGCACCGGACCAAGCGCCCCGTGATGATCGCGACGGAC CTGATTCGGTTCCTCGCCATGGCGAGCGTTCCGATCGCGTACCTCCTCGGCCTGCTGTCCTACGGCCAGCTGCTGGCCGT CTCGGTCATCTCCGGAACGGCGAGCATCGCCTTCACCGCCGCATCCGGTGCGTACCTGAAGCACCTCGTCCACTCGGACC ATCTGCTCGTCGCGAACGGGAGATTCGAGGGCACGAGCTGGGTGGCGACCGCGGCTGGCCCGCCTCTCGGTGGAGCACTC ATCGGGCTGCTCGGCCCGGTCGTCACCGTCGCCGCCGACGCCTTCAGCTACCTGCTCTCCGCGCTCGGGGTCCTCCGCAT CCGTGGCGGCGACATCGCAGCGCCCCGCGACGCGGCCACCAAGATGCGTGCCACTGACCTTCTGAGCGGCTGGCGATTCA TCCTCCACGACCGCGCTCTACGACGTCTGTTCCTCAACTCCGTGACAGTCAGCGGTCTGATCATGGCCACCAGCCCGCTC CTGGCCGTCCTTCTGCTGGGCGAGTACCACTTCCCCGCCTGGCAGTACGGTCTCGCCTTCGGCATCCCGGCACTCGGCGG CTTCGCCGGCGCCCGCCTCTCCGCGCGCCTCGTCACCCGCTACGGTCGGCACCGCGTCATGATCGTCTCCGGCTGGCTGC GCTCGATCTTCCCGCTCGGACTCGCCCTGACCCGTCCCGGCATTCCCGGACTCCTCACGGTAATCGTCGTCGAGGCCCTG CTGATCACCTGCATGGGCGTCTTCAACCCCATCAACGCGACAGAACGCCTGCAGCGCACTCCCGCCGACCACGTCGCACA AGTCCTCAGCGCATGGAGCATCAGCAGCAAACTCGTCCAGGCGACCCTCATGGTGATCTGGGGCGTCCTCGCGACACTCA CCAGCCCACTCACCGCCATCACCATCTCCGGCGTCCTCCTGCTCGCCACCCCCCTCTTCCTTCCCCAACGAATGCACATG CCCGATCTCGCGGTTGGCGCGCCGGCTGAAGACGTCCGTTCCGCATGA
Upstream 100 bases:
>100_bases CTGGTGGTTGTGGCTCGCCGAGGAATCGGTTGTTTGATCGCGCTCCAGCATGACTGATGTGCTTCGGGCATCCAAACCGT CGGTTGTCGCGAGGAGCCAT
Downstream 100 bases:
>100_bases ACCGTCGCAACGCCCGGTTCGCTCCTGAAGGACGCCGCTTCGTCCATCCGAGCGGTGAGCCCGACCGCGAACGACAACGC ACCGTCATCGCCGGGTCATG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Protein; Mfs Transporter; Export Protein; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; MFS Transporter Multidrug Efflux Transporter; LOW QUALITY PROTEIN Transmembrane Efflux Protein; LOW QUALITY PROTEIN Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MRVRSGPGFGWLWSAYAVSTYGTWIAFGAFPLIAVRVLHSSAFAVSFLGAAGLAVAAIVAVPLGPWIEHRTKRPVMIATD LIRFLAMASVPIAYLLGLLSYGQLLAVSVISGTASIAFTAASGAYLKHLVHSDHLLVANGRFEGTSWVATAAGPPLGGAL IGLLGPVVTVAADAFSYLLSALGVLRIRGGDIAAPRDAATKMRATDLLSGWRFILHDRALRRLFLNSVTVSGLIMATSPL LAVLLLGEYHFPAWQYGLAFGIPALGGFAGARLSARLVTRYGRHRVMIVSGWLRSIFPLGLALTRPGIPGLLTVIVVEAL LITCMGVFNPINATERLQRTPADHVAQVLSAWSISSKLVQATLMVIWGVLATLTSPLTAITISGVLLLATPLFLPQRMHM PDLAVGAPAEDVRSA
Sequences:
>Translated_415_residues MRVRSGPGFGWLWSAYAVSTYGTWIAFGAFPLIAVRVLHSSAFAVSFLGAAGLAVAAIVAVPLGPWIEHRTKRPVMIATD LIRFLAMASVPIAYLLGLLSYGQLLAVSVISGTASIAFTAASGAYLKHLVHSDHLLVANGRFEGTSWVATAAGPPLGGAL IGLLGPVVTVAADAFSYLLSALGVLRIRGGDIAAPRDAATKMRATDLLSGWRFILHDRALRRLFLNSVTVSGLIMATSPL LAVLLLGEYHFPAWQYGLAFGIPALGGFAGARLSARLVTRYGRHRVMIVSGWLRSIFPLGLALTRPGIPGLLTVIVVEAL LITCMGVFNPINATERLQRTPADHVAQVLSAWSISSKLVQATLMVIWGVLATLTSPLTAITISGVLLLATPLFLPQRMHM PDLAVGAPAEDVRSA >Mature_415_residues MRVRSGPGFGWLWSAYAVSTYGTWIAFGAFPLIAVRVLHSSAFAVSFLGAAGLAVAAIVAVPLGPWIEHRTKRPVMIATD LIRFLAMASVPIAYLLGLLSYGQLLAVSVISGTASIAFTAASGAYLKHLVHSDHLLVANGRFEGTSWVATAAGPPLGGAL IGLLGPVVTVAADAFSYLLSALGVLRIRGGDIAAPRDAATKMRATDLLSGWRFILHDRALRRLFLNSVTVSGLIMATSPL LAVLLLGEYHFPAWQYGLAFGIPALGGFAGARLSARLVTRYGRHRVMIVSGWLRSIFPLGLALTRPGIPGLLTVIVVEAL LITCMGVFNPINATERLQRTPADHVAQVLSAWSISSKLVQATLMVIWGVLATLTSPLTAITISGVLLLATPLFLPQRMHM PDLAVGAPAEDVRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43851; Mature: 43851
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRSGPGFGWLWSAYAVSTYGTWIAFGAFPLIAVRVLHSSAFAVSFLGAAGLAVAAIVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLGPWIEHRTKRPVMIATDLIRFLAMASVPIAYLLGLLSYGQLLAVSVISGTASIAFTA HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE ASGAYLKHLVHSDHLLVANGRFEGTSWVATAAGPPLGGALIGLLGPVVTVAADAFSYLLS CCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALGVLRIRGGDIAAPRDAATKMRATDLLSGWRFILHDRALRRLFLNSVTVSGLIMATSPL HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVLLLGEYHFPAWQYGLAFGIPALGGFAGARLSARLVTRYGRHRVMIVSGWLRSIFPLG HHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH LALTRPGIPGLLTVIVVEALLITCMGVFNPINATERLQRTPADHVAQVLSAWSISSKLVQ HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH ATLMVIWGVLATLTSPLTAITISGVLLLATPLFLPQRMHMPDLAVGAPAEDVRSA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure MRVRSGPGFGWLWSAYAVSTYGTWIAFGAFPLIAVRVLHSSAFAVSFLGAAGLAVAAIVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPLGPWIEHRTKRPVMIATDLIRFLAMASVPIAYLLGLLSYGQLLAVSVISGTASIAFTA HCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE ASGAYLKHLVHSDHLLVANGRFEGTSWVATAAGPPLGGALIGLLGPVVTVAADAFSYLLS CCHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALGVLRIRGGDIAAPRDAATKMRATDLLSGWRFILHDRALRRLFLNSVTVSGLIMATSPL HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVLLLGEYHFPAWQYGLAFGIPALGGFAGARLSARLVTRYGRHRVMIVSGWLRSIFPLG HHHHHHHCCCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH LALTRPGIPGLLTVIVVEALLITCMGVFNPINATERLQRTPADHVAQVLSAWSISSKLVQ HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH ATLMVIWGVLATLTSPLTAITISGVLLLATPLFLPQRMHMPDLAVGAPAEDVRSA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA