Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314285

Identifier: 158314285

GI number: 158314285

Start: 2919945

End: 2922434

Strand: Direct

Name: 158314285

Synonym: Franean1_2455

Alternate gene names: NA

Gene position: 2919945-2922434 (Clockwise)

Preceding gene: 158314284

Following gene: 158314287

Centisome position: 32.51

GC content: 71.29

Gene sequence:

>2490_bases
TTGTGGTCGTTCTGGCAAGCTGCGGGCATGGATGTGGGCACGGGGGCCCGGGGACCGGTCGGCGGGGAATCAGCGTCCTC
GGCGGGTTCGGGCGGTGGGGTGGACTTCTTCGTCTCCTACACCGGGGCGGATGAGGCGTGGGCGACCTGGGTCGCCGAGG
TGCTCGAAGCCGCGGGCCGCACGGTGGCGGTGCAGGCGTGGGATTCCCCTGCGGGGGAGAATTTCGTGACCTGGATCAGC
GTGCAGATGGGCGCTGCGGCCCGGACGGTTGCGGTCTGTTCGCAGGCGTATTTCGCTTCGCATTGGTGCACCCAGGAGTG
GACCGGCGCCCTGGCCGGGCGGAAACTGACCCCGTTGCGTGTCGCCGACTGTCCAGTCCCGCCGGTGCTGTCGACTATCT
CCTACCGGGACCTGTTCGACGTCGACGAGCCCGTAGCGCGACGGCGTCTGCTGGAGGCGGTCGGCCTGGTCCACCCCGTG
CGGGTTTCCGGTGGCTTCCCCGGCCGGCCGGCCGCCCCGCCCTCGGTGGGGGCGGTGTTCCCGGGGCGGCTGCCCGCAGT
GTGGAATGTGCCCGCGCGGAACCTACTCTTCACCGGCCGTGACACGCTCCTGGACGGCCTGCGCACCCAGCTCGCCGCGG
GTACTGGCCGTATCGCGATCGCGGCGTTGCGGGGCGCCGGTGGGGTGGGTAAGTCGCAGCTGGCGGTGGAGTTCGCCTGG
CGGTATGCCGCGGACTACCAGCTGGTCTGGTGGGTGGACGCGGAAACCCCCGCGGGTCTGCTCGCCGGTCTTGCTGCTCT
CGCGAACACTCTCGGGATCGGCTCGGGGGATCTGCCGGTCCGGGCGGAGGAGGCGCTGGCGGAGCTGGGACGTCGACAGA
GCTGGCTGCTGGTCTATGACAACGTCGGCGACCCAACGACGTTGGCGCGGATGCTTCCGCCGGCCACGGGACGGCTGGTG
GTGACCTGCCGCGATCCGGGGGTGGGTCGGGTCGGGGTGGAGTTGGTCGAAGTCGGCGAGTTCACCCGCGCCGAATCGTT
CGCGCTTCTGCGCCGCTATCTGCCTACCCTGTCCGACACCGCCGCCGACCAGCTCGCTGACGCGCTCGGTGATCTACCGT
TGGCTGTCGACCAGGCCGGGGCTTTCCTGGCCACCAGTGGTATCCCCGTGCACGACTATCTGGCCCTGCTGGCCACCCGA
CCCGCTTTGCTGCTCGCTGAGGAGACGCTGCATCATCCAGGGCTGGCCGCGACCGTCACCGCTGCCCGTGAACGGCTCGG
CAGCGACCATCCGGGTGCTGCTGGCCTGCTGGATCGGCTGGCGTTCCTCGCCCCCGAACCCATCCCACTCCGCCCCGCCG
GCAGCGAATGGCTGGCCCTCGGGGATCCCTACACCACGCACACCGCGCTTGCTGCGATCAGCAGGCTCGCGCTCGCCCGC
CGCACCGACACCACCCTCCAGCTGCACCGCCTCGTCCACGCTCTCCTGCGGGCCCGCCTCACCGTCGACCAGCGGCGCAC
CGCCCTCGCTGGTGCCCTTGACCTGCTCGCCACCGTCTACCCCGGCGAGGCGGAGGACCCCTCGGCCTGGCCGACCTACG
CCACGCTCACTCCCCACGTCACCGCGGTCGCAGGCCATCTCGCTGACTTTCCCGGCCTGGCCGAACCCGACGGGTTCCGG
CTGCTGCTGCACCGGACCTGCTGGTACCTGCACTGCAGCGGCCAGAACCACAGTGTCCGCACCCTCAGCCACACCACCCG
CACCCGCTGGATCACTACCCTCGGCGCTGACCATCCCGACAGCCAGATCATCACCACCGCCCTCGCCACCGCGCTGGCCG
ACCTCGGCGAGCACCGGGCGGCGCGGGAGCTGGCCGAAGACACCCTGACCCGCCGCAGCCGGGTCCTCGGCGACGACCAC
CCCCTCACCCTGCAATCGGCGAACAACCTCGCCAACCAGATGGCCGCCCTCGGCGAGCACCAAGCCGCCCGCAAGCTGGC
CGAAGACACCCTGACCCGAATGCGGCGTCTCCTCGGTCACGACCACCCCGACACCCTGGCCTCGGCGAACAACCTCACCC
TTCTGCTGGCCGACCTCGGCGAGCACCAGGCGGCGCGGGAGCTGGCCGAAGACACCCTGACCCGCCGCAGCCGGGTCCTC
GGCGACGACCACCCCCACACCCTGCGCTCGGCGAACAACCTCGCTTTCCATCGGGCCGCGGTGGGGGAGCACCAGGTGGC
GCGGGAGCTGGCCGAGGACACCCTGACCCGCTGCCGCCGGGTCCTCGGTGACGACCATCCCGACACCCTGGCCTCAGCGC
ACAACCTCGCCATCGATCTCAGCGCCTTGGGAGAACACCAGGCAGCCCGGGAACTGGCCGAAGAAACCCTCACCCGCCGC
CGGCGCCTCCTCGGCGACGACCACCCCCACACCCGCGACAGTGCCGGCCAGCTCGAGCTCCTCCTCGAACAGCTCGGCCC
GGCCCTCTGA

Upstream 100 bases:

>100_bases
GCCGTCACCTGTGTCTGAGGATGGTCGGCTTGCCGGCCCTCTGCCTGCGGCTCGGTTGTTGGCGCGGCGGGGAGGTGGGA
CGCGTCTGGTTGGTGACGGC

Downstream 100 bases:

>100_bases
CGCCCGCCTGATCATCGACCTAACCCACCCGACTGATCTTGTCGGAAATCCGTCCGGGCGTGGGTGTGATCTTCATCGAC
AAGTGGCGGTGGTTCTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: TIR Protein; NB-ARC Domain-Containing Protein; Tetratricopeptide Repeat Family; NB-ARC Domain Protein; Serine/Threonine Protein Kinase; WD40 Repeat Subgroup; WD-40 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Domain-Containing Protein; Kinesin Light Chain; Sigma-70 Region 2 Domain Protein; TPR Domain Family Protein; Tetratricopeptide Repeat Family Protein; SEC-C Motif Domain Protein; Tetratricopeptide Repeat-Containing Protein; Peptidase; Ll-Interleukin Receptor; Chaperone Protein DNAK; SARP Family Transcriptional Regulator; Transmembrane Receptor Activity; Peptidase-Like

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MWSFWQAAGMDVGTGARGPVGGESASSAGSGGGVDFFVSYTGADEAWATWVAEVLEAAGRTVAVQAWDSPAGENFVTWIS
VQMGAAARTVAVCSQAYFASHWCTQEWTGALAGRKLTPLRVADCPVPPVLSTISYRDLFDVDEPVARRRLLEAVGLVHPV
RVSGGFPGRPAAPPSVGAVFPGRLPAVWNVPARNLLFTGRDTLLDGLRTQLAAGTGRIAIAALRGAGGVGKSQLAVEFAW
RYAADYQLVWWVDAETPAGLLAGLAALANTLGIGSGDLPVRAEEALAELGRRQSWLLVYDNVGDPTTLARMLPPATGRLV
VTCRDPGVGRVGVELVEVGEFTRAESFALLRRYLPTLSDTAADQLADALGDLPLAVDQAGAFLATSGIPVHDYLALLATR
PALLLAEETLHHPGLAATVTAARERLGSDHPGAAGLLDRLAFLAPEPIPLRPAGSEWLALGDPYTTHTALAAISRLALAR
RTDTTLQLHRLVHALLRARLTVDQRRTALAGALDLLATVYPGEAEDPSAWPTYATLTPHVTAVAGHLADFPGLAEPDGFR
LLLHRTCWYLHCSGQNHSVRTLSHTTRTRWITTLGADHPDSQIITTALATALADLGEHRAARELAEDTLTRRSRVLGDDH
PLTLQSANNLANQMAALGEHQAARKLAEDTLTRMRRLLGHDHPDTLASANNLTLLLADLGEHQAARELAEDTLTRRSRVL
GDDHPHTLRSANNLAFHRAAVGEHQVARELAEDTLTRCRRVLGDDHPDTLASAHNLAIDLSALGEHQAARELAEETLTRR
RRLLGDDHPHTRDSAGQLELLLEQLGPAL

Sequences:

>Translated_829_residues
MWSFWQAAGMDVGTGARGPVGGESASSAGSGGGVDFFVSYTGADEAWATWVAEVLEAAGRTVAVQAWDSPAGENFVTWIS
VQMGAAARTVAVCSQAYFASHWCTQEWTGALAGRKLTPLRVADCPVPPVLSTISYRDLFDVDEPVARRRLLEAVGLVHPV
RVSGGFPGRPAAPPSVGAVFPGRLPAVWNVPARNLLFTGRDTLLDGLRTQLAAGTGRIAIAALRGAGGVGKSQLAVEFAW
RYAADYQLVWWVDAETPAGLLAGLAALANTLGIGSGDLPVRAEEALAELGRRQSWLLVYDNVGDPTTLARMLPPATGRLV
VTCRDPGVGRVGVELVEVGEFTRAESFALLRRYLPTLSDTAADQLADALGDLPLAVDQAGAFLATSGIPVHDYLALLATR
PALLLAEETLHHPGLAATVTAARERLGSDHPGAAGLLDRLAFLAPEPIPLRPAGSEWLALGDPYTTHTALAAISRLALAR
RTDTTLQLHRLVHALLRARLTVDQRRTALAGALDLLATVYPGEAEDPSAWPTYATLTPHVTAVAGHLADFPGLAEPDGFR
LLLHRTCWYLHCSGQNHSVRTLSHTTRTRWITTLGADHPDSQIITTALATALADLGEHRAARELAEDTLTRRSRVLGDDH
PLTLQSANNLANQMAALGEHQAARKLAEDTLTRMRRLLGHDHPDTLASANNLTLLLADLGEHQAARELAEDTLTRRSRVL
GDDHPHTLRSANNLAFHRAAVGEHQVARELAEDTLTRCRRVLGDDHPDTLASAHNLAIDLSALGEHQAARELAEETLTRR
RRLLGDDHPHTRDSAGQLELLLEQLGPAL
>Mature_829_residues
MWSFWQAAGMDVGTGARGPVGGESASSAGSGGGVDFFVSYTGADEAWATWVAEVLEAAGRTVAVQAWDSPAGENFVTWIS
VQMGAAARTVAVCSQAYFASHWCTQEWTGALAGRKLTPLRVADCPVPPVLSTISYRDLFDVDEPVARRRLLEAVGLVHPV
RVSGGFPGRPAAPPSVGAVFPGRLPAVWNVPARNLLFTGRDTLLDGLRTQLAAGTGRIAIAALRGAGGVGKSQLAVEFAW
RYAADYQLVWWVDAETPAGLLAGLAALANTLGIGSGDLPVRAEEALAELGRRQSWLLVYDNVGDPTTLARMLPPATGRLV
VTCRDPGVGRVGVELVEVGEFTRAESFALLRRYLPTLSDTAADQLADALGDLPLAVDQAGAFLATSGIPVHDYLALLATR
PALLLAEETLHHPGLAATVTAARERLGSDHPGAAGLLDRLAFLAPEPIPLRPAGSEWLALGDPYTTHTALAAISRLALAR
RTDTTLQLHRLVHALLRARLTVDQRRTALAGALDLLATVYPGEAEDPSAWPTYATLTPHVTAVAGHLADFPGLAEPDGFR
LLLHRTCWYLHCSGQNHSVRTLSHTTRTRWITTLGADHPDSQIITTALATALADLGEHRAARELAEDTLTRRSRVLGDDH
PLTLQSANNLANQMAALGEHQAARKLAEDTLTRMRRLLGHDHPDTLASANNLTLLLADLGEHQAARELAEDTLTRRSRVL
GDDHPHTLRSANNLAFHRAAVGEHQVARELAEDTLTRCRRVLGDDHPDTLASAHNLAIDLSALGEHQAARELAEETLTRR
RRLLGDDHPHTRDSAGQLELLLEQLGPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735431, Length=166, Percent_Identity=32.5301204819277, Blast_Score=87, Evalue=7e-17,
Organism=Homo sapiens, GI194306559, Length=166, Percent_Identity=32.5301204819277, Blast_Score=87, Evalue=9e-17,
Organism=Homo sapiens, GI33620730, Length=166, Percent_Identity=32.5301204819277, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI198041728, Length=181, Percent_Identity=31.4917127071823, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI41871960, Length=165, Percent_Identity=32.7272727272727, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI198041734, Length=181, Percent_Identity=31.4917127071823, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI198041731, Length=181, Percent_Identity=31.4917127071823, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI12383062, Length=181, Percent_Identity=31.4917127071823, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI41871955, Length=165, Percent_Identity=32.7272727272727, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI41871946, Length=165, Percent_Identity=32.7272727272727, Blast_Score=84, Evalue=5e-16,
Organism=Homo sapiens, GI34304360, Length=227, Percent_Identity=29.9559471365639, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI91825557, Length=138, Percent_Identity=34.0579710144928, Blast_Score=74, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71984524, Length=180, Percent_Identity=30, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71984517, Length=180, Percent_Identity=30, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71984527, Length=180, Percent_Identity=30, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71984535, Length=180, Percent_Identity=30, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17647555, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88690; Mature: 88690

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSFWQAAGMDVGTGARGPVGGESASSAGSGGGVDFFVSYTGADEAWATWVAEVLEAAGR
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
TVAVQAWDSPAGENFVTWISVQMGAAARTVAVCSQAYFASHWCTQEWTGALAGRKLTPLR
EEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEE
VADCPVPPVLSTISYRDLFDVDEPVARRRLLEAVGLVHPVRVSGGFPGRPAAPPSVGAVF
ECCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
PGRLPAVWNVPARNLLFTGRDTLLDGLRTQLAAGTGRIAIAALRGAGGVGKSQLAVEFAW
CCCCCCEECCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
RYAADYQLVWWVDAETPAGLLAGLAALANTLGIGSGDLPVRAEEALAELGRRQSWLLVYD
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEC
NVGDPTTLARMLPPATGRLVVTCRDPGVGRVGVELVEVGEFTRAESFALLRRYLPTLSDT
CCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH
AADQLADALGDLPLAVDQAGAFLATSGIPVHDYLALLATRPALLLAEETLHHPGLAATVT
HHHHHHHHHCCCCEEHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
AARERLGSDHPGAAGLLDRLAFLAPEPIPLRPAGSEWLALGDPYTTHTALAAISRLALAR
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
RTDTTLQLHRLVHALLRARLTVDQRRTALAGALDLLATVYPGEAEDPSAWPTYATLTPHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHH
TAVAGHLADFPGLAEPDGFRLLLHRTCWYLHCSGQNHSVRTLSHTTRTRWITTLGADHPD
HHHHHHHHCCCCCCCCCCHHHHEECCEEEEEECCCCCCEEEHHHHHHHHEEEECCCCCCC
SQIITTALATALADLGEHRAARELAEDTLTRRSRVLGDDHPLTLQSANNLANQMAALGEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
QAARKLAEDTLTRMRRLLGHDHPDTLASANNLTLLLADLGEHQAARELAEDTLTRRSRVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
GDDHPHTLRSANNLAFHRAAVGEHQVARELAEDTLTRCRRVLGDDHPDTLASAHNLAIDL
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEH
SALGEHQAARELAEETLTRRRRLLGDDHPHTRDSAGQLELLLEQLGPAL
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MWSFWQAAGMDVGTGARGPVGGESASSAGSGGGVDFFVSYTGADEAWATWVAEVLEAAGR
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
TVAVQAWDSPAGENFVTWISVQMGAAARTVAVCSQAYFASHWCTQEWTGALAGRKLTPLR
EEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEE
VADCPVPPVLSTISYRDLFDVDEPVARRRLLEAVGLVHPVRVSGGFPGRPAAPPSVGAVF
ECCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC
PGRLPAVWNVPARNLLFTGRDTLLDGLRTQLAAGTGRIAIAALRGAGGVGKSQLAVEFAW
CCCCCCEECCCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH
RYAADYQLVWWVDAETPAGLLAGLAALANTLGIGSGDLPVRAEEALAELGRRQSWLLVYD
HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEC
NVGDPTTLARMLPPATGRLVVTCRDPGVGRVGVELVEVGEFTRAESFALLRRYLPTLSDT
CCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH
AADQLADALGDLPLAVDQAGAFLATSGIPVHDYLALLATRPALLLAEETLHHPGLAATVT
HHHHHHHHHCCCCEEHHCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH
AARERLGSDHPGAAGLLDRLAFLAPEPIPLRPAGSEWLALGDPYTTHTALAAISRLALAR
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
RTDTTLQLHRLVHALLRARLTVDQRRTALAGALDLLATVYPGEAEDPSAWPTYATLTPHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHH
TAVAGHLADFPGLAEPDGFRLLLHRTCWYLHCSGQNHSVRTLSHTTRTRWITTLGADHPD
HHHHHHHHCCCCCCCCCCHHHHEECCEEEEEECCCCCCEEEHHHHHHHHEEEECCCCCCC
SQIITTALATALADLGEHRAARELAEDTLTRRSRVLGDDHPLTLQSANNLANQMAALGEH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHH
QAARKLAEDTLTRMRRLLGHDHPDTLASANNLTLLLADLGEHQAARELAEDTLTRRSRVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
GDDHPHTLRSANNLAFHRAAVGEHQVARELAEDTLTRCRRVLGDDHPDTLASAHNLAIDL
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEH
SALGEHQAARELAEETLTRRRRLLGDDHPHTRDSAGQLELLLEQLGPAL
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA