Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314284

Identifier: 158314284

GI number: 158314284

Start: 2917687

End: 2919747

Strand: Direct

Name: 158314284

Synonym: Franean1_2454

Alternate gene names: NA

Gene position: 2917687-2919747 (Clockwise)

Preceding gene: 158314283

Following gene: 158314285

Centisome position: 32.48

GC content: 76.86

Gene sequence:

>2061_bases
GTGCTGACCGGCGGCCGACCGGACCCACGTGAGGGTGTCCGTCCCAGGCTCCCCGCGACCCGCGCCACGGGCGAGTGGCA
GCCGGCCGAATGGAACGTCCCGCGCCGCGACCCGTTCTTCGTGGGCCGCGACGCGCTGCTCCAGCGCATCCACCGCGAAC
TGCGCCCACCAGGAGTCGGCCGGGGACCCGACTTCGGCCGCGGGCGTGACGCCAGCCGGGGGCGCAATGCAGGTCAGGGG
CGTGACATCGGCCGGGGGCGCAACATCGGGCTGGTGTCCGCGCGTGGCGCCGCCGGGATGGGCGCGTCGCGGCTCGCCGT
CGAGTACGCGCATCGGCATGCCGGAGACTACGGCCTGGTGTGGTGGGTGGACGCGGACACCCCCGAGCGCGCCGAGTCGT
GCCTGGCCGAGCTGGCCGCCGCCATCGCCCCGCCGGGGGCAGGCCACCGGGCCGCCGTGCTGCGCCGCCTGTGGGCCGAG
CTCGGCCAGCGCACGGACTGGCTGCTGATCTACGACGGTGTCGGTGATCCCCGCGACCTGACCGCCGTGGCACCGCCGGA
CAGCGGCCGGCTGCTCGTGACGAGCCGCGGACCAGCGGTGGCCAGGCTCACCCCCGTGCTGCTCGAGGTCGGCGAGCTGC
GCCGGGACGAGTCGGTCCTGCTACTACGCCAGCACCACCGCGGAATCAGCCCGCCGGCCGCGGAGGCGCTTGCTTGTGTG
CTGGCGGACGTCCCCTTCGCGGTCGCGCTGGCCGGCCGCCACCTGGCGACGACCGGCCAGCCGGTCGCCGACTACCTGGC
CCTGCTCGGGCGGGAGGCCGCTTCCGATCCGGTCGCCGCGGCCGTCGCAGCGAGCCGCGCGCGACTGGACGTGGTCGATC
CGGCCGCGGCCGGCCTCCTCGACCAGGTGGCGTTCCTCGCAGCGGACCCCCTGACGCTCACCCGGGCGCCAGCCGGCACC
GCCGCCGCGGCCGCCCGGCTCGACCGCCTCGGCCTGGCCGACTGGGACGGGGCCACGATCCGCGTGCACGGGCACGTCCA
GGCTCTGGTGCGCCGGCGGCTGGCCGGAGGCCGGCGGCCAGCGGCCCTGCTCGGCGCGCAGCGGCTGCTGGTCTGTGCGT
ACCTGCCCGGTCGCGACCCCGCGGACCCGGCCTCATGGCCGTCACTCGCCACGCTCGACCCGCACATCCGCACACTCACC
ACGTGGCTCGACGACGAGTGCGCGGACTTCCGCCGGCTGGTGCTGCGCACCGCCCGGTACCTGGCCGCCTCCGCCCGCTA
CGAAGCCGGCGAACGGCTCACGCACCAGGCACGGGCCCTCTGGGGCGGACGGCTGGGCCCGGACCACCCGGACACGCTTG
CCGCCGCCGACCTCGAGGCCTCGATCCGCGCCGACGGGTTCGCCGATCACGACACCGCGCGGGCACTGCTGGGCGACGTC
CACGCCCGCCGGGTGCGGGTGCTCGGCGAGCAGCACCGCGACACGCTGCACTCGGCGTGGAACCTGGCGCGCGCGGCCGG
GGAGAGCGGCGACCACGACGAGTCCGCCCGCTTGCTGCGAGACACCGTCGCCCGGCAGCGGGCGGAGCTCGGCCCGGACG
ACCGCGACACCCTGCGTTCGGCGCACAGCCTCGGCCACGCCCTGACCCGGCTGGGGGAGTACGGCGTGGCCCACGAGCTG
CTCGCGGAGACGCTCGCCCGCCGCGGCCGGACGTCCGGCGCCGCCCACCCGGACACCGTGTGGACCGCGGCGGTGCTCGG
CGTCGCGCTGCGTGGCCTCGGCCGTGGCGCGCACGCCCGCGACCTGCACGCCCGCGCGCTGGCCGGCGCGCGGGCACAGC
TCGGCGACGAGCATCCGCTGACCCTGTACGCGGCGCTGCACCTCGCACTCGACCTGGCCGCCCTCGGCGCGGCCGACGCC
GGCCGGGACCTGTTCACCGAAGTCATCGGCTGGGACGTCGTCGGATGGCGCGACAACTCTCCGTCGGGCCCACGAACCTG
GGTCGCGCAGTGGGCCCGGGGCCACCAGGAGGACATCCGCAGACTGTGGTCGGGTAGCTGA

Upstream 100 bases:

>100_bases
ACCGTCGGTGAAGATGGGGATCCGGTCGACGGGTTCGTCCCGCGGGGGATCGACGCGGGTTACGCCGACCTGACTGCTGA
GCAAATCCGAGGTGACGCGG

Downstream 100 bases:

>100_bases
GCTCGGTCGCGGGCCGTGGCCGCCACCCCTGATTCGATCTTGTCGGGAAACCATCGGTTTCCGGCCAGGGCCGGGATGGG
TGTCGGACGGCTGGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MLTGGRPDPREGVRPRLPATRATGEWQPAEWNVPRRDPFFVGRDALLQRIHRELRPPGVGRGPDFGRGRDASRGRNAGQG
RDIGRGRNIGLVSARGAAGMGASRLAVEYAHRHAGDYGLVWWVDADTPERAESCLAELAAAIAPPGAGHRAAVLRRLWAE
LGQRTDWLLIYDGVGDPRDLTAVAPPDSGRLLVTSRGPAVARLTPVLLEVGELRRDESVLLLRQHHRGISPPAAEALACV
LADVPFAVALAGRHLATTGQPVADYLALLGREAASDPVAAAVAASRARLDVVDPAAAGLLDQVAFLAADPLTLTRAPAGT
AAAAARLDRLGLADWDGATIRVHGHVQALVRRRLAGGRRPAALLGAQRLLVCAYLPGRDPADPASWPSLATLDPHIRTLT
TWLDDECADFRRLVLRTARYLAASARYEAGERLTHQARALWGGRLGPDHPDTLAAADLEASIRADGFADHDTARALLGDV
HARRVRVLGEQHRDTLHSAWNLARAAGESGDHDESARLLRDTVARQRAELGPDDRDTLRSAHSLGHALTRLGEYGVAHEL
LAETLARRGRTSGAAHPDTVWTAAVLGVALRGLGRGAHARDLHARALAGARAQLGDEHPLTLYAALHLALDLAALGAADA
GRDLFTEVIGWDVVGWRDNSPSGPRTWVAQWARGHQEDIRRLWSGS

Sequences:

>Translated_686_residues
MLTGGRPDPREGVRPRLPATRATGEWQPAEWNVPRRDPFFVGRDALLQRIHRELRPPGVGRGPDFGRGRDASRGRNAGQG
RDIGRGRNIGLVSARGAAGMGASRLAVEYAHRHAGDYGLVWWVDADTPERAESCLAELAAAIAPPGAGHRAAVLRRLWAE
LGQRTDWLLIYDGVGDPRDLTAVAPPDSGRLLVTSRGPAVARLTPVLLEVGELRRDESVLLLRQHHRGISPPAAEALACV
LADVPFAVALAGRHLATTGQPVADYLALLGREAASDPVAAAVAASRARLDVVDPAAAGLLDQVAFLAADPLTLTRAPAGT
AAAAARLDRLGLADWDGATIRVHGHVQALVRRRLAGGRRPAALLGAQRLLVCAYLPGRDPADPASWPSLATLDPHIRTLT
TWLDDECADFRRLVLRTARYLAASARYEAGERLTHQARALWGGRLGPDHPDTLAAADLEASIRADGFADHDTARALLGDV
HARRVRVLGEQHRDTLHSAWNLARAAGESGDHDESARLLRDTVARQRAELGPDDRDTLRSAHSLGHALTRLGEYGVAHEL
LAETLARRGRTSGAAHPDTVWTAAVLGVALRGLGRGAHARDLHARALAGARAQLGDEHPLTLYAALHLALDLAALGAADA
GRDLFTEVIGWDVVGWRDNSPSGPRTWVAQWARGHQEDIRRLWSGS
>Mature_686_residues
MLTGGRPDPREGVRPRLPATRATGEWQPAEWNVPRRDPFFVGRDALLQRIHRELRPPGVGRGPDFGRGRDASRGRNAGQG
RDIGRGRNIGLVSARGAAGMGASRLAVEYAHRHAGDYGLVWWVDADTPERAESCLAELAAAIAPPGAGHRAAVLRRLWAE
LGQRTDWLLIYDGVGDPRDLTAVAPPDSGRLLVTSRGPAVARLTPVLLEVGELRRDESVLLLRQHHRGISPPAAEALACV
LADVPFAVALAGRHLATTGQPVADYLALLGREAASDPVAAAVAASRARLDVVDPAAAGLLDQVAFLAADPLTLTRAPAGT
AAAAARLDRLGLADWDGATIRVHGHVQALVRRRLAGGRRPAALLGAQRLLVCAYLPGRDPADPASWPSLATLDPHIRTLT
TWLDDECADFRRLVLRTARYLAASARYEAGERLTHQARALWGGRLGPDHPDTLAAADLEASIRADGFADHDTARALLGDV
HARRVRVLGEQHRDTLHSAWNLARAAGESGDHDESARLLRDTVARQRAELGPDDRDTLRSAHSLGHALTRLGEYGVAHEL
LAETLARRGRTSGAAHPDTVWTAAVLGVALRGLGRGAHARDLHARALAGARAQLGDEHPLTLYAALHLALDLAALGAADA
GRDLFTEVIGWDVVGWRDNSPSGPRTWVAQWARGHQEDIRRLWSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73454; Mature: 73454

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGGRPDPREGVRPRLPATRATGEWQPAEWNVPRRDPFFVGRDALLQRIHRELRPPGVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCC
RGPDFGRGRDASRGRNAGQGRDIGRGRNIGLVSARGAAGMGASRLAVEYAHRHAGDYGLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
WWVDADTPERAESCLAELAAAIAPPGAGHRAAVLRRLWAELGQRTDWLLIYDGVGDPRDL
EEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
TAVAPPDSGRLLVTSRGPAVARLTPVLLEVGELRRDESVLLLRQHHRGISPPAAEALACV
EEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
LADVPFAVALAGRHLATTGQPVADYLALLGREAASDPVAAAVAASRARLDVVDPAAAGLL
HHHCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEECCHHHHHHH
DQVAFLAADPLTLTRAPAGTAAAAARLDRLGLADWDGATIRVHGHVQALVRRRLAGGRRP
HHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCC
AALLGAQRLLVCAYLPGRDPADPASWPSLATLDPHIRTLTTWLDDECADFRRLVLRTARY
HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASARYEAGERLTHQARALWGGRLGPDHPDTLAAADLEASIRADGFADHDTARALLGDV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHH
HARRVRVLGEQHRDTLHSAWNLARAAGESGDHDESARLLRDTVARQRAELGPDDRDTLRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AHSLGHALTRLGEYGVAHELLAETLARRGRTSGAAHPDTVWTAAVLGVALRGLGRGAHAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
DLHARALAGARAQLGDEHPLTLYAALHLALDLAALGAADAGRDLFTEVIGWDVVGWRDNS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCC
PSGPRTWVAQWARGHQEDIRRLWSGS
CCCHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MLTGGRPDPREGVRPRLPATRATGEWQPAEWNVPRRDPFFVGRDALLQRIHRELRPPGVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCC
RGPDFGRGRDASRGRNAGQGRDIGRGRNIGLVSARGAAGMGASRLAVEYAHRHAGDYGLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEE
WWVDADTPERAESCLAELAAAIAPPGAGHRAAVLRRLWAELGQRTDWLLIYDGVGDPRDL
EEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
TAVAPPDSGRLLVTSRGPAVARLTPVLLEVGELRRDESVLLLRQHHRGISPPAAEALACV
EEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHH
LADVPFAVALAGRHLATTGQPVADYLALLGREAASDPVAAAVAASRARLDVVDPAAAGLL
HHHCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEECCHHHHHHH
DQVAFLAADPLTLTRAPAGTAAAAARLDRLGLADWDGATIRVHGHVQALVRRRLAGGRRP
HHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCC
AALLGAQRLLVCAYLPGRDPADPASWPSLATLDPHIRTLTTWLDDECADFRRLVLRTARY
HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASARYEAGERLTHQARALWGGRLGPDHPDTLAAADLEASIRADGFADHDTARALLGDV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHH
HARRVRVLGEQHRDTLHSAWNLARAAGESGDHDESARLLRDTVARQRAELGPDDRDTLRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AHSLGHALTRLGEYGVAHELLAETLARRGRTSGAAHPDTVWTAAVLGVALRGLGRGAHAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
DLHARALAGARAQLGDEHPLTLYAALHLALDLAALGAADAGRDLFTEVIGWDVVGWRDNS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCCCC
PSGPRTWVAQWARGHQEDIRRLWSGS
CCCHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA