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The map label for this gene is ydeP [C]

Identifier: 158314283

GI number: 158314283

Start: 2915155

End: 2917458

Strand: Direct

Name: ydeP [C]

Synonym: Franean1_2453

Alternate gene names: 158314283

Gene position: 2915155-2917458 (Clockwise)

Preceding gene: 158314282

Following gene: 158314284

Centisome position: 32.46

GC content: 72.53

Gene sequence:

>2304_bases
ATGGACCCCGAGCTGAGGATCGGCGAACCGGCGACGTCCGCCGCCGGTGTTCCCGGCGTGGCACACGCGCTGGCGCGCTG
CCGGGAGCTGATGGGCGTGCGCCGTTCCGTGCAGACCCTGCGGCTACTCAACCAGGACGACGGTTACGACTGTCCCGGCT
GCGCCTGGCCCGACCCGCGGCCGGACGACCGTTCACGCGCCGAATTCTGCGAGAACGGCGCGAAGGCCGTCGCGCAGGAG
GCCACCCGGGCCCGGGTGACACCGGAGTTCTTCGCCGCGCACAGCCTGACCGACCTCGCCACCCGCTCCGGGCACTGGCT
CGGTGAACAGGGCCGGCTCATCAACCCCGTGTACAAGGCCGCGGGCAGCGACCATTACGCCCCCGTCGGCTGGGACGAGG
CCTTCCGGATCGTCGCCGACGAGCTGACCGGCCTGGAAAGCCCCGCCGAGGCCGCCTTCTACACCTCGGGGCGGACGAGC
AACGAGGCCGCTTTCCTTTACCAGCTCTTCGCCCGCGCGTTCGGCACGAACAATCTGCCGGACTGCTCGAACATGTGCCA
CGAGTCGTCGGGTGCCGCGCTGACCGAGACGATCGGGGTCGGCAAGGGCTCCGTCACCCTGGAGGACCTGGAGACGGCGG
ACTTGGTGCTCGTCGTCGGGCAGAATCCGGGCACCAACCATCCGCGGATGCTGACGTCGCTGGAGCGGCTGAAGCGGGCC
GGTGGCAGCGTCGTGGCGGTCAACCCGCTACCCGAGGCGGCGCTGATGCGGTTCCGTAACCCGCAGCGGGTCTCCGGGGT
GCTCGGCCGGGGCACCGCGCTCGCCGACCAGTTCCTGCAGATCCGCCTCGGTGGGGACATGGCCCTGTTCCAGGCGCTGT
CCGCCCGACTGCTCGCTGCCGAGGAGGCCAGCCCCGGCACCGTCCTCGATCAGGCCTTCATCGCCGGGCACACGACCGGG
TTCGAGGAGTTCGCGGCGCACGTACGCGCCCACCTGACCCCCGGCGACGTCGCCACCGCCACCGGTCTACGCCCAGATGA
GATCGACGAGCTCGCCGGGCGGGTCCTCGCCGCCGACAAGGTGATCGTCTGCTGGGCGATGGGGCTCACCCAGCACCCGG
ACGCCGTCGCCACGATCCGGGAGGTGGTGAACTTCCTGCTGCTGCGGGGCAACATCGGCCGTCCCGGCGCGGGGGTCTGC
CCGGTGCGCGGCCACTCCAACGTCCAGGGCGACCGGACGATGGGCATCTGGGAACGGATGCCCGACGCGTTCCTGGACGC
CCTCGGCACCGAGTTCGGCTTCGCGCCGCCCCGCCACCACGGCCTGGACGTCGTCGACACCATCCGGGCCATGCGCGACG
GCCGGGTGAAGGTGTTCGTCGCGATGGGCGGCAACTTCGTCGCCGCGACGCCGGACTCGGCCGTCACCGAGGACGCGATC
CGCCGGTGCCGGCTCACCGTGCAGGTCTCCACCGCGCTCAACCGCTCGCACGCCATCACCGGCGAGCGCGCCCTCATCCT
GCCCACACTCGGCCGCACCGAGCTGGACGTCCAGGCCGGCGGCCCGCAGCGGGTCAGCGTCGAGGACTCGATGGGCTCCG
TCCACGCCTCCCGCGGCCGGTTGGCCCCGGCCGGGCCCGAGCTGCGCTCCGAGATCGCGATCATCTGCGGCCTGGCCGCG
GCGACCCTCGACCGCACGGCCACGGCCACGGCCACGGCCGCCGCGCCGACGGTCGACTGGGCGGCGCTGGCCGAGGACTA
CCGGCGGGTACGCGCGCACATCGCGAACGTGGTCCCCGGGTTCGCCGACTACGAGGCCCGCCTCGACGAGCCCGGCGGCT
TCCTGCTCCCGCACCCGCCCCGCGACAGCCGGACCTTCCCGACGCCGAGCGGGCGGGCCGCCTTCACCGTGAACACCTGC
GAGATCCGGCCGACGCCCCCCAGCCACCTGCTCCTGCAGACGATCCGCTCCCATGATCAGTACAACACCACTGTCTACGG
TCTGGACGACCGTTACCGCGGGGTCCGCCACGGCCGCCGGGTCGTGCTGGTCAGCCCGGACGACCTGGCCGAGCTCGGCA
TCGCCGACGGCGCCCGGGTCGACCTGATCGGGGTCTGGACCGACGGCGTGCAGCGCCGCGCCCCCGACTTCCGGGTGGTC
TCGTATCCCACCGCCCGCGGCTGCGCCGCCGCCTACTTCCCGGAGACCAACGTCCTGGTGCCCCTCGACAGCACCGCGAA
GCGCAGCAACACCCCGACGTCGAAGTCCATCCTGATCCGGCTGGACGTCCACCCGGAACAGTGA

Upstream 100 bases:

>100_bases
CCTCGGCTGACGCGGCGGACCTCCCGTTCGCACGCGCCGCGCGTAGCGTCGGACGGACGGCCGCCCTACCAGCGAGCTCC
CCGACGACGGACGGACCGCT

Downstream 100 bases:

>100_bases
CGCGGCCCGCGGGCGCCCGGCGCGGATCCCCACCGAGGTGGCGGCGGCGGGAGCTGGTGGCACGCCCCTGGCCTGCGGCG
ATGCCGCCACCCCCACCCGG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MDPELRIGEPATSAAGVPGVAHALARCRELMGVRRSVQTLRLLNQDDGYDCPGCAWPDPRPDDRSRAEFCENGAKAVAQE
ATRARVTPEFFAAHSLTDLATRSGHWLGEQGRLINPVYKAAGSDHYAPVGWDEAFRIVADELTGLESPAEAAFYTSGRTS
NEAAFLYQLFARAFGTNNLPDCSNMCHESSGAALTETIGVGKGSVTLEDLETADLVLVVGQNPGTNHPRMLTSLERLKRA
GGSVVAVNPLPEAALMRFRNPQRVSGVLGRGTALADQFLQIRLGGDMALFQALSARLLAAEEASPGTVLDQAFIAGHTTG
FEEFAAHVRAHLTPGDVATATGLRPDEIDELAGRVLAADKVIVCWAMGLTQHPDAVATIREVVNFLLLRGNIGRPGAGVC
PVRGHSNVQGDRTMGIWERMPDAFLDALGTEFGFAPPRHHGLDVVDTIRAMRDGRVKVFVAMGGNFVAATPDSAVTEDAI
RRCRLTVQVSTALNRSHAITGERALILPTLGRTELDVQAGGPQRVSVEDSMGSVHASRGRLAPAGPELRSEIAIICGLAA
ATLDRTATATATAAAPTVDWAALAEDYRRVRAHIANVVPGFADYEARLDEPGGFLLPHPPRDSRTFPTPSGRAAFTVNTC
EIRPTPPSHLLLQTIRSHDQYNTTVYGLDDRYRGVRHGRRVVLVSPDDLAELGIADGARVDLIGVWTDGVQRRAPDFRVV
SYPTARGCAAAYFPETNVLVPLDSTAKRSNTPTSKSILIRLDVHPEQ

Sequences:

>Translated_767_residues
MDPELRIGEPATSAAGVPGVAHALARCRELMGVRRSVQTLRLLNQDDGYDCPGCAWPDPRPDDRSRAEFCENGAKAVAQE
ATRARVTPEFFAAHSLTDLATRSGHWLGEQGRLINPVYKAAGSDHYAPVGWDEAFRIVADELTGLESPAEAAFYTSGRTS
NEAAFLYQLFARAFGTNNLPDCSNMCHESSGAALTETIGVGKGSVTLEDLETADLVLVVGQNPGTNHPRMLTSLERLKRA
GGSVVAVNPLPEAALMRFRNPQRVSGVLGRGTALADQFLQIRLGGDMALFQALSARLLAAEEASPGTVLDQAFIAGHTTG
FEEFAAHVRAHLTPGDVATATGLRPDEIDELAGRVLAADKVIVCWAMGLTQHPDAVATIREVVNFLLLRGNIGRPGAGVC
PVRGHSNVQGDRTMGIWERMPDAFLDALGTEFGFAPPRHHGLDVVDTIRAMRDGRVKVFVAMGGNFVAATPDSAVTEDAI
RRCRLTVQVSTALNRSHAITGERALILPTLGRTELDVQAGGPQRVSVEDSMGSVHASRGRLAPAGPELRSEIAIICGLAA
ATLDRTATATATAAAPTVDWAALAEDYRRVRAHIANVVPGFADYEARLDEPGGFLLPHPPRDSRTFPTPSGRAAFTVNTC
EIRPTPPSHLLLQTIRSHDQYNTTVYGLDDRYRGVRHGRRVVLVSPDDLAELGIADGARVDLIGVWTDGVQRRAPDFRVV
SYPTARGCAAAYFPETNVLVPLDSTAKRSNTPTSKSILIRLDVHPEQ
>Mature_767_residues
MDPELRIGEPATSAAGVPGVAHALARCRELMGVRRSVQTLRLLNQDDGYDCPGCAWPDPRPDDRSRAEFCENGAKAVAQE
ATRARVTPEFFAAHSLTDLATRSGHWLGEQGRLINPVYKAAGSDHYAPVGWDEAFRIVADELTGLESPAEAAFYTSGRTS
NEAAFLYQLFARAFGTNNLPDCSNMCHESSGAALTETIGVGKGSVTLEDLETADLVLVVGQNPGTNHPRMLTSLERLKRA
GGSVVAVNPLPEAALMRFRNPQRVSGVLGRGTALADQFLQIRLGGDMALFQALSARLLAAEEASPGTVLDQAFIAGHTTG
FEEFAAHVRAHLTPGDVATATGLRPDEIDELAGRVLAADKVIVCWAMGLTQHPDAVATIREVVNFLLLRGNIGRPGAGVC
PVRGHSNVQGDRTMGIWERMPDAFLDALGTEFGFAPPRHHGLDVVDTIRAMRDGRVKVFVAMGGNFVAATPDSAVTEDAI
RRCRLTVQVSTALNRSHAITGERALILPTLGRTELDVQAGGPQRVSVEDSMGSVHASRGRLAPAGPELRSEIAIICGLAA
ATLDRTATATATAAAPTVDWAALAEDYRRVRAHIANVVPGFADYEARLDEPGGFLLPHPPRDSRTFPTPSGRAAFTVNTC
EIRPTPPSHLLLQTIRSHDQYNTTVYGLDDRYRGVRHGRRVVLVSPDDLAELGIADGARVDLIGVWTDGVQRRAPDFRVV
SYPTARGCAAAYFPETNVLVPLDSTAKRSNTPTSKSILIRLDVHPEQ

Specific function: Unknown

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=765, Percent_Identity=44.1830065359477, Blast_Score=627, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=318, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI3868720, Length=495, Percent_Identity=23.8383838383838, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 82259; Mature: 82259

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPELRIGEPATSAAGVPGVAHALARCRELMGVRRSVQTLRLLNQDDGYDCPGCAWPDPR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDDRSRAEFCENGAKAVAQEATRARVTPEFFAAHSLTDLATRSGHWLGEQGRLINPVYKA
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHH
AGSDHYAPVGWDEAFRIVADELTGLESPAEAAFYTSGRTSNEAAFLYQLFARAFGTNNLP
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCC
DCSNMCHESSGAALTETIGVGKGSVTLEDLETADLVLVVGQNPGTNHPRMLTSLERLKRA
CHHHHHHCCCCCEEEHHHCCCCCCEEHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GGSVVAVNPLPEAALMRFRNPQRVSGVLGRGTALADQFLQIRLGGDMALFQALSARLLAA
CCCEEEECCCCHHHHHHCCCCHHHHHHHCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH
EEASPGTVLDQAFIAGHTTGFEEFAAHVRAHLTPGDVATATGLRPDEIDELAGRVLAADK
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCC
VIVCWAMGLTQHPDAVATIREVVNFLLLRGNIGRPGAGVCPVRGHSNVQGDRTMGIWERM
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
PDAFLDALGTEFGFAPPRHHGLDVVDTIRAMRDGRVKVFVAMGGNFVAATPDSAVTEDAI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHH
RRCRLTVQVSTALNRSHAITGERALILPTLGRTELDVQAGGPQRVSVEDSMGSVHASRGR
HHHEEEEEEHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHCCCC
LAPAGPELRSEIAIICGLAAATLDRTATATATAAAPTVDWAALAEDYRRVRAHIANVVPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
FADYEARLDEPGGFLLPHPPRDSRTFPTPSGRAAFTVNTCEIRPTPPSHLLLQTIRSHDQ
CCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCC
YNTTVYGLDDRYRGVRHGRRVVLVSPDDLAELGIADGARVDLIGVWTDGVQRRAPDFRVV
CCCEEEECCHHHHHHHCCCEEEEECCCCHHHHCCCCCCEEEEEEEECCCHHHCCCCCEEE
SYPTARGCAAAYFPETNVLVPLDSTAKRSNTPTSKSILIRLDVHPEQ
ECCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MDPELRIGEPATSAAGVPGVAHALARCRELMGVRRSVQTLRLLNQDDGYDCPGCAWPDPR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDDRSRAEFCENGAKAVAQEATRARVTPEFFAAHSLTDLATRSGHWLGEQGRLINPVYKA
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHH
AGSDHYAPVGWDEAFRIVADELTGLESPAEAAFYTSGRTSNEAAFLYQLFARAFGTNNLP
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCC
DCSNMCHESSGAALTETIGVGKGSVTLEDLETADLVLVVGQNPGTNHPRMLTSLERLKRA
CHHHHHHCCCCCEEEHHHCCCCCCEEHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GGSVVAVNPLPEAALMRFRNPQRVSGVLGRGTALADQFLQIRLGGDMALFQALSARLLAA
CCCEEEECCCCHHHHHHCCCCHHHHHHHCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHH
EEASPGTVLDQAFIAGHTTGFEEFAAHVRAHLTPGDVATATGLRPDEIDELAGRVLAADK
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCC
VIVCWAMGLTQHPDAVATIREVVNFLLLRGNIGRPGAGVCPVRGHSNVQGDRTMGIWERM
EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
PDAFLDALGTEFGFAPPRHHGLDVVDTIRAMRDGRVKVFVAMGGNFVAATPDSAVTEDAI
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHH
RRCRLTVQVSTALNRSHAITGERALILPTLGRTELDVQAGGPQRVSVEDSMGSVHASRGR
HHHEEEEEEHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHCCCC
LAPAGPELRSEIAIICGLAAATLDRTATATATAAAPTVDWAALAEDYRRVRAHIANVVPG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
FADYEARLDEPGGFLLPHPPRDSRTFPTPSGRAAFTVNTCEIRPTPPSHLLLQTIRSHDQ
CCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCC
YNTTVYGLDDRYRGVRHGRRVVLVSPDDLAELGIADGARVDLIGVWTDGVQRRAPDFRVV
CCCEEEECCHHHHHHHCCCEEEEECCCCHHHHCCCCCCEEEEEEEECCCHHHCCCCCEEE
SYPTARGCAAAYFPETNVLVPLDSTAKRSNTPTSKSILIRLDVHPEQ
ECCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]