| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314261
Identifier: 158314261
GI number: 158314261
Start: 2893571
End: 2894017
Strand: Direct
Name: 158314261
Synonym: Franean1_2431
Alternate gene names: NA
Gene position: 2893571-2894017 (Clockwise)
Preceding gene: 158314260
Following gene: 158314262
Centisome position: 32.22
GC content: 72.93
Gene sequence:
>447_bases ATGGCCCCGCCCGCCCCCGTCGAGATCAGCGCCCGGGTGCTCTTCGTCGCCCAGGACCGCGTGCTGCTGGCGAACCGCCG CGGGCAGCCGTGGTTCTACCTGCCGGGCGGCAACGTGGACCCGGGAGAGACCGTCGAGGCGGCCCTGCGCCGGGAGACCC AGGAGCAGGCCGGCCTCGACGTGGCCGACCTGGAGTTCATCGGCTGCGCCGAGAACGTCTACGTCGAGGGCGGCGTCCGC CACCAGGAGATCAACGTCCTGTTCGCCGCCGATCTGCCCTGGGGGGCGCAGATCGGCAGCCATGAGTTCGACGTCGACAT CACCTCGGTGTCGATCGGCAACCTGTCCGGCCTCGACCTGCGCCCGGCGAGCCTGCGGGACGTCATCCACGGCTGGCTGG CCGACCGGGAGCCGAGCTGGCACGGAGCGGCGCCGGCCGCGAGGTGA
Upstream 100 bases:
>100_bases GGCCGTGCAGGTGCTCAGGCTGGACCCCGCCGAGTTCGGGATGCACTCCGCCCGTCGCATCGCCTAGCCCCCCCGCATCG ACCCCCCGTTTGGAGCGCTC
Downstream 100 bases:
>100_bases CACTCCGCCGTCCGATAATCTCGCCTGGTGGTTACTGGCACCGGCGAACGCGGCGGTTTCCCGGATCAGCCCGGTGATCT TCCCGGGCAGGGTGGCCCCG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAPPAPVEISARVLFVAQDRVLLANRRGQPWFYLPGGNVDPGETVEAALRRETQEQAGLDVADLEFIGCAENVYVEGGVR HQEINVLFAADLPWGAQIGSHEFDVDITSVSIGNLSGLDLRPASLRDVIHGWLADREPSWHGAAPAAR
Sequences:
>Translated_148_residues MAPPAPVEISARVLFVAQDRVLLANRRGQPWFYLPGGNVDPGETVEAALRRETQEQAGLDVADLEFIGCAENVYVEGGVR HQEINVLFAADLPWGAQIGSHEFDVDITSVSIGNLSGLDLRPASLRDVIHGWLADREPSWHGAAPAAR >Mature_147_residues APPAPVEISARVLFVAQDRVLLANRRGQPWFYLPGGNVDPGETVEAALRRETQEQAGLDVADLEFIGCAENVYVEGGVRH QEINVLFAADLPWGAQIGSHEFDVDITSVSIGNLSGLDLRPASLRDVIHGWLADREPSWHGAAPAAR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16034; Mature: 15903
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPAPVEISARVLFVAQDRVLLANRRGQPWFYLPGGNVDPGETVEAALRRETQEQAGLD CCCCCCCEEEEEEEEEECCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC VADLEFIGCAENVYVEGGVRHQEINVLFAADLPWGAQIGSHEFDVDITSVSIGNLSGLDL EEHEEEECCCCCEEEECCCEEEEEEEEEEECCCCCCCCCCEECCEEEEEEEECCCCCCCC RPASLRDVIHGWLADREPSWHGAAPAAR CCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure APPAPVEISARVLFVAQDRVLLANRRGQPWFYLPGGNVDPGETVEAALRRETQEQAGLD CCCCCCEEEEEEEEEECCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCC VADLEFIGCAENVYVEGGVRHQEINVLFAADLPWGAQIGSHEFDVDITSVSIGNLSGLDL EEHEEEECCCCCEEEECCCEEEEEEEEEEECCCCCCCCCCEECCEEEEEEEECCCCCCCC RPASLRDVIHGWLADREPSWHGAAPAAR CCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA