| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is smtA [C]
Identifier: 158314262
GI number: 158314262
Start: 2894045
End: 2894824
Strand: Direct
Name: smtA [C]
Synonym: Franean1_2432
Alternate gene names: 158314262
Gene position: 2894045-2894824 (Clockwise)
Preceding gene: 158314261
Following gene: 158314263
Centisome position: 32.22
GC content: 76.67
Gene sequence:
>780_bases GTGGTTACTGGCACCGGCGAACGCGGCGGTTTCCCGGATCAGCCCGGTGATCTTCCCGGGCAGGGTGGCCCCGCGGCCGG CCGGGCTGGTCCGGGCGGCCCGGCGGGGGAGGCGCCGCCGAGCCGTTGGGCGTCCCTGACCGGTACGCGCGGCGGAGGTG CGCCGAGCGTCGCCGTGGGGGACCGCTACGACGAGCGGTTCGCGAGCCTCGCGGCCAGCGGCCTGGACATTCACGGCGAG GCGAGCTTCTGCGCCGCGCTCGTCCCCGCCGGTGCGCGGATCCTCGACGCCGGCTGCGGCACCGGGCGGGTCGCCATCCG GCTCGCCGAGCTGGGCTGTTCATGCACCGGTGTCGATGTCGACCCGTCGATGCTCGCGCGGGCGAAGGCGGTGTCCGGCG AGGTGACCTGGATTCTCGGCGATCTCGCGAACCTGCCCGCCGCGCTCGCCGACCAGGGCGCCACGGCGCCGGCGGGCCGG GCTGGCCCGTTCGACCTGGTCGTGGCGGCGGGCAACGTGATCCCGCTGCTCGCGGAGGGCACGGAGGCGCACGTGCTGCG GGTCCTCGCGGGCGTCCTGCGCCCGGGTGGCCTTCTGGTCGCCGGGTTCGGCCTTGACGGCGCGCACCTGCCGCTGCCCG AGGCGCCCTTCGGCCTCGCCGAGTACGACCGCTGGTGCGCGGGCGCGGGCCTCACCCTCGAGCGCCGCTTCGCGACCTGG GACGGCGCGCCCGACCGTCCCGAGGACGGTTACGCCGTGAGCGTGCACTGCCGGGACTGA
Upstream 100 bases:
>100_bases GCGGGACGTCATCCACGGCTGGCTGGCCGACCGGGAGCCGAGCTGGCACGGAGCGGCGCCGGCCGCGAGGTGACACTCCG CCGTCCGATAATCTCGCCTG
Downstream 100 bases:
>100_bases CCCGGCCCCGGAGGCGGATCGGCCGGCCCGGCCTTGTCGATCGGTGGTGACGGGGATCGCCGTCCGGCGTTCAATGGTGC CTGTGAATCAACCACTTGGG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; LmbE Family Protein; MCP Methyltransferase CheR-Type; Menaquinone Biosynthesis Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MVTGTGERGGFPDQPGDLPGQGGPAAGRAGPGGPAGEAPPSRWASLTGTRGGGAPSVAVGDRYDERFASLAASGLDIHGE ASFCAALVPAGARILDAGCGTGRVAIRLAELGCSCTGVDVDPSMLARAKAVSGEVTWILGDLANLPAALADQGATAPAGR AGPFDLVVAAGNVIPLLAEGTEAHVLRVLAGVLRPGGLLVAGFGLDGAHLPLPEAPFGLAEYDRWCAGAGLTLERRFATW DGAPDRPEDGYAVSVHCRD
Sequences:
>Translated_259_residues MVTGTGERGGFPDQPGDLPGQGGPAAGRAGPGGPAGEAPPSRWASLTGTRGGGAPSVAVGDRYDERFASLAASGLDIHGE ASFCAALVPAGARILDAGCGTGRVAIRLAELGCSCTGVDVDPSMLARAKAVSGEVTWILGDLANLPAALADQGATAPAGR AGPFDLVVAAGNVIPLLAEGTEAHVLRVLAGVLRPGGLLVAGFGLDGAHLPLPEAPFGLAEYDRWCAGAGLTLERRFATW DGAPDRPEDGYAVSVHCRD >Mature_259_residues MVTGTGERGGFPDQPGDLPGQGGPAAGRAGPGGPAGEAPPSRWASLTGTRGGGAPSVAVGDRYDERFASLAASGLDIHGE ASFCAALVPAGARILDAGCGTGRVAIRLAELGCSCTGVDVDPSMLARAKAVSGEVTWILGDLANLPAALADQGATAPAGR AGPFDLVVAAGNVIPLLAEGTEAHVLRVLAGVLRPGGLLVAGFGLDGAHLPLPEAPFGLAEYDRWCAGAGLTLERRFATW DGAPDRPEDGYAVSVHCRD
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25836; Mature: 25836
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGTGERGGFPDQPGDLPGQGGPAAGRAGPGGPAGEAPPSRWASLTGTRGGGAPSVAVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEC DRYDERFASLAASGLDIHGEASFCAALVPAGARILDAGCGTGRVAIRLAELGCSCTGVDV CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHCCCEECCCC DPSMLARAKAVSGEVTWILGDLANLPAALADQGATAPAGRAGPFDLVVAAGNVIPLLAEG CHHHHHHHHHCCCCEEEEECCHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECC TEAHVLRVLAGVLRPGGLLVAGFGLDGAHLPLPEAPFGLAEYDRWCAGAGLTLERRFATW CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECC DGAPDRPEDGYAVSVHCRD CCCCCCCCCCCEEEEEECC >Mature Secondary Structure MVTGTGERGGFPDQPGDLPGQGGPAAGRAGPGGPAGEAPPSRWASLTGTRGGGAPSVAVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEC DRYDERFASLAASGLDIHGEASFCAALVPAGARILDAGCGTGRVAIRLAELGCSCTGVDV CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHCCCEECCCC DPSMLARAKAVSGEVTWILGDLANLPAALADQGATAPAGRAGPFDLVVAAGNVIPLLAEG CHHHHHHHHHCCCCEEEEECCHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECC TEAHVLRVLAGVLRPGGLLVAGFGLDGAHLPLPEAPFGLAEYDRWCAGAGLTLERRFATW CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECC DGAPDRPEDGYAVSVHCRD CCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA