| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314258
Identifier: 158314258
GI number: 158314258
Start: 2890642
End: 2891724
Strand: Direct
Name: 158314258
Synonym: Franean1_2428
Alternate gene names: NA
Gene position: 2890642-2891724 (Clockwise)
Preceding gene: 158314256
Following gene: 158314260
Centisome position: 32.18
GC content: 75.72
Gene sequence:
>1083_bases GTGGTGGGTGACCGGCCGCGGCGAACTGGATCACCGCTGGCGGAATCCTGGTCGCCGGCCGCGGTAATCCGGATGGCCGT TCGGTTGGACAGCGGCCGGCGGTTACGTGAGGCTTCTATCTGTGTCCATACAGTCACGATCGTGGGTGGTTGCCGGCGCT CGTCCGCATCGGAGCCGGCCGTGATCCGCCCCGGGACGCAGCGCCGGGCGGAGCGGCCGCCGGCCGCCGGGCGGGCCCGT GAGCTGGCCGGACGGGTTCCTGCGGCCAGGGCGCTCGTCGACCGCCTCGACCGTGCGGGAGCCGGTCCGGTGGACGCGCT CGCGCGGGCCGCGCAGGTCGCGGACGCCCGGGTGCTGGCGAGCATCGACCGGGTCGGGCCCATCGCGACAGACGCCGAGG CGGCGAGCACCACGACCGCCTCCTACCTGACCCTGCTCGACCTCGCCGACCGCGCCGGGATCGCCGACGATCTCGACATC AGTCTGCGGCTCGCTGCGGTCGGCCAGGCCGTGCCCCGCGACGGTGCCAAGATCGCCCACGGGAACGCCGCCGAGATCTG CGCCCGCGCCCGCGAGGTCGGCGCCACAGTCACTCTGGACATCTTCCCCCTGGACGCCGCCGAACCGGCCGCCGTCGACG CGATGCTGGTGACCCTGTCGGAGCTGCGCCGGGACGTCCCGGCGACCGGTGCCGTGCTGCGGACAGGCCTGGCCCGCACC GTGGCGGACTGCCGGGACCTCGCCCGTCCGGGCTGTCGGGTCCGGCTGTGTCCGGGGCCCGCGCGGGCCAGGCAGTCGGC GCCCGGCGCGCGCCGGGCGCCGACTGCCTGGCGCGGTGCGTTCGCCAGCTCCCTGGGTGTCCTCATGGCCGGACCGGGCT ATCCCGTGGTCGCCACGGACGATCCGGGGCTGATCGCGCTCACCGCCCGGCTGGCCATGCATGTCGGTCGCCGCCGCGAC AGCTTCGAGTTCCAGGCCCTGACGGGCACGCTCGGCCGCGAGCACCGGCGGCTGGTCGCCGAGGGCTACCGGACCAGGGC GTACGTCGGGTACGGCCTGCTCCGGCCGGCTCGCGCGCGGTAG
Upstream 100 bases:
>100_bases TCGCCGGCATACCGGTGCATGGGTCCGAGGAGGAGGCTGGTCATGAGTCCTACTCTCTCCGTGCCCCGTGGGAGGCGCCC AACGGGGGTGGCCCGCCGCG
Downstream 100 bases:
>100_bases GTCCGCGGGCGGGCCGGCCGGAGCAGGCGACGGACACGGAGCCGGCGGGCACGGGACAGGGCAGGGCCGTTCGGCTCGTG CCGTCACCGGCGCTCCGTCA
Product: proline dehydrogenase
Products: NA
Alternate protein names: L-Proline Dehydrogenase; Proline Dehydrogenase PutA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR
Sequences:
>Translated_360_residues MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR >Mature_360_residues MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR
Specific function: Unknown
COG id: COG0506
COG function: function code E; Proline dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37824; Mature: 37824
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC VIRPGTQRRAERPPAAGRARELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLA EECCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDISLRLAAVGQAVPRDGAKIAH HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEECC GNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATD HHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECC DPGLIALTARLAMHVGRRRDSFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECHHHCCCCCCC >Mature Secondary Structure MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPA CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC VIRPGTQRRAERPPAAGRARELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLA EECCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDISLRLAAVGQAVPRDGAKIAH HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEECC GNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATD HHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECC DPGLIALTARLAMHVGRRRDSFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA