Click here to switch to the map view.

The map label for this gene is fdhD [H]

Identifier: 158314138

GI number: 158314138

Start: 2754738

End: 2755598

Strand: Direct

Name: fdhD [H]

Synonym: Franean1_2306

Alternate gene names: 158314138

Gene position: 2754738-2755598 (Clockwise)

Preceding gene: 158314136

Following gene: 158314139

Centisome position: 30.67

GC content: 75.26

Gene sequence:

>861_bases
ATGGGGCGAGCAAGCGCGCGACGCCGGGTCATGCGGGTGACTCTGGGGGCGGAGCCGACGCTTCGGCCCGACACCGTCGT
CGGGGAGGAACCGCTCGAGATCCGGGTCGGCGGCCAGCCGCTGGCGGTCACCATGCGGACCCCGGGCGACGATATGGACC
TCGCCGTGGGCTTCCTGATCGGGGAGGGCCTGATCGCGACCGCCGCGGACGTCGCGGGCATGCGCTACTGCGCCGGCAGT
GAGGGCGCCGTCGACGGCGAGGGCCGGCTGACCTACAACGTGCTGGACGTGACCCTCGCCCCCGGCGTGCCCGAGCCGGA
GGTCGACCTGCGGCGGAACTTCTACACCACGAGCTCGTGCGGGGTGTGCGGGCGGGCGAGCATCGACGCCGTGCGGCTGC
GCGGGCGGTACGAGATCCGCGACGACCCGCTGCGCATCACCGCCGAGGTGCTCGTCGACCTGCCGGGACGGCTGCGCCGC
GCGCAGCGGCTGTTCGCGACGACCGGCGGCCTGCACGCAGCCGCCCTCGCCGACGCCGACGGCGAGGTGCTGGCGGTGCG
CGAGGACGTCGGCCGGCACAACGCGGTCGACAAGGTCGTCGGGTGGGCGGCGCGGGCGGGGATGGTGCCGCTGCGGGGGC
TGGTGCTGCTGGTCAGCGGCCGGGCGTCGTTCGAGCTGGTGCAGAAGGCGCTGCTGGCCGGGATCCCGGTGCTCGCCGCG
GTGTCGGCGCCGTCGGCGCTCGCCGTCGACCTGGCGGAGGAGTCCGGGATGACGCTTGCCGGGTTCGTCCGCGGGTCGTC
GATGAACCTCTACGCCGGGACGCACCGGGTGATCCTGCCGGCGGTCGCCGCGGCCCGGTGA

Upstream 100 bases:

>100_bases
CGCTCGGTCCGTCCTGATGCGATCGCCGAGGATGCCGTGAACGTGGCGTCGAAGGCTCGACATGATGGATTTCTCGTCCC
TCCTGGGGGACCGTGTCGCT

Downstream 100 bases:

>100_bases
GATCCCGTCCCGGGATGGGATCTGGGTATGTCGGAAGCGGACGAAGGGGACGAGGCCGCCGGGCCGTCCGAAGCACCGGA
TAGCATCCTCAACCGTGACC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGRASARRRVMRVTLGAEPTLRPDTVVGEEPLEIRVGGQPLAVTMRTPGDDMDLAVGFLIGEGLIATAADVAGMRYCAGS
EGAVDGEGRLTYNVLDVTLAPGVPEPEVDLRRNFYTTSSCGVCGRASIDAVRLRGRYEIRDDPLRITAEVLVDLPGRLRR
AQRLFATTGGLHAAALADADGEVLAVREDVGRHNAVDKVVGWAARAGMVPLRGLVLLVSGRASFELVQKALLAGIPVLAA
VSAPSALAVDLAEESGMTLAGFVRGSSMNLYAGTHRVILPAVAAAR

Sequences:

>Translated_286_residues
MGRASARRRVMRVTLGAEPTLRPDTVVGEEPLEIRVGGQPLAVTMRTPGDDMDLAVGFLIGEGLIATAADVAGMRYCAGS
EGAVDGEGRLTYNVLDVTLAPGVPEPEVDLRRNFYTTSSCGVCGRASIDAVRLRGRYEIRDDPLRITAEVLVDLPGRLRR
AQRLFATTGGLHAAALADADGEVLAVREDVGRHNAVDKVVGWAARAGMVPLRGLVLLVSGRASFELVQKALLAGIPVLAA
VSAPSALAVDLAEESGMTLAGFVRGSSMNLYAGTHRVILPAVAAAR
>Mature_285_residues
GRASARRRVMRVTLGAEPTLRPDTVVGEEPLEIRVGGQPLAVTMRTPGDDMDLAVGFLIGEGLIATAADVAGMRYCAGSE
GAVDGEGRLTYNVLDVTLAPGVPEPEVDLRRNFYTTSSCGVCGRASIDAVRLRGRYEIRDDPLRITAEVLVDLPGRLRRA
QRLFATTGGLHAAALADADGEVLAVREDVGRHNAVDKVVGWAARAGMVPLRGLVLLVSGRASFELVQKALLAGIPVLAAV
SAPSALAVDLAEESGMTLAGFVRGSSMNLYAGTHRVILPAVAAAR

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=261, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29975; Mature: 29844

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRASARRRVMRVTLGAEPTLRPDTVVGEEPLEIRVGGQPLAVTMRTPGDDMDLAVGFLI
CCCHHHHHEEEEEEECCCCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCHHHEEEEHH
GEGLIATAADVAGMRYCAGSEGAVDGEGRLTYNVLDVTLAPGVPEPEVDLRRNFYTTSSC
CCCHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCEECCCCC
GVCGRASIDAVRLRGRYEIRDDPLRITAEVLVDLPGRLRRAQRLFATTGGLHAAALADAD
CCCCCCCCEEEEECCEEEECCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC
GEVLAVREDVGRHNAVDKVVGWAARAGMVPLRGLVLLVSGRASFELVQKALLAGIPVLAA
CCEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEE
VSAPSALAVDLAEESGMTLAGFVRGSSMNLYAGTHRVILPAVAAAR
CCCCCEEEEEEHHCCCCEEEEEEECCCEEEECCCCEEEEHHHHCCC
>Mature Secondary Structure 
GRASARRRVMRVTLGAEPTLRPDTVVGEEPLEIRVGGQPLAVTMRTPGDDMDLAVGFLI
CCHHHHHEEEEEEECCCCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCHHHEEEEHH
GEGLIATAADVAGMRYCAGSEGAVDGEGRLTYNVLDVTLAPGVPEPEVDLRRNFYTTSSC
CCCHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCEECCCCC
GVCGRASIDAVRLRGRYEIRDDPLRITAEVLVDLPGRLRRAQRLFATTGGLHAAALADAD
CCCCCCCCEEEEECCEEEECCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC
GEVLAVREDVGRHNAVDKVVGWAARAGMVPLRGLVLLVSGRASFELVQKALLAGIPVLAA
CCEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEE
VSAPSALAVDLAEESGMTLAGFVRGSSMNLYAGTHRVILPAVAAAR
CCCCCEEEEEEHHCCCCEEEEEEECCCEEEECCCCEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]