| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314139
Identifier: 158314139
GI number: 158314139
Start: 2755693
End: 2756280
Strand: Direct
Name: 158314139
Synonym: Franean1_2307
Alternate gene names: NA
Gene position: 2755693-2756280 (Clockwise)
Preceding gene: 158314138
Following gene: 158314141
Centisome position: 30.68
GC content: 70.07
Gene sequence:
>588_bases GTGACCTGCATCGTCGGTGTGGAGCACGACGGACGGGTCGTGATCGGGGGAGACAGCGCCGGCGTAGCCGGCTGGTCGAT CACGGTCCGGGCGGATACGAAGGTCTTCCGCAACGGCGAGTTCGTCATGGGCTTCACGGACTCGTTCCGGATGGGGCAGC TGCTTCGGTACAGCCTCGTCCCGCCCGTGCCGCACAGCTGGGACCTCGACCGCTTCATGGCGACCGAGTTCGTCTCGGTC GTCCGCGACTGCCTGCGCGACGGCGGTTTCGCCCGCAATGACGCCGGCAACGAGTCGGGTGGGCTGTTCCTCGTGGGCAT CCGGGGGCAGCTGTACCGGATCGACTCCGACTACCAGATCGGCCGCACCCTCGACAACTACGACGCGGCGGGCTGCGGCG AGGAGTACGCGCGCGGGTCGCTGCACAGCACGGTGGGGGAGGAGCCCGAGGAGCGGGTCCGCAAGGCCCTGGAGGCCGCC GCCCACCACTCGACCGGGGTCTGCCCGCCGTTCCACATCCTCTCCGACGACGGTCACGACGGCGGCGGCCACGGCCCCGG CGATCACGGCGGTCAGCCACTCATGTAA
Upstream 100 bases:
>100_bases CGGTGAGATCCCGTCCCGGGATGGGATCTGGGTATGTCGGAAGCGGACGAAGGGGACGAGGCCGCCGGGCCGTCCGAAGC ACCGGATAGCATCCTCAACC
Downstream 100 bases:
>100_bases CCCGGTGTCGGCCCGCTCACAGCCGCGATTGCCTGAGCCGCGGCTCAGGCAATCGCGGCTGGCGGTCAGGGGCGGCGCAT CCGCTCCGCCGCGACGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFRNGEFVMGFTDSFRMGQLLRYSLVPPVPHSWDLDRFMATEFVSV VRDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQIGRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAA AHHSTGVCPPFHILSDDGHDGGGHGPGDHGGQPLM
Sequences:
>Translated_195_residues MTCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFRNGEFVMGFTDSFRMGQLLRYSLVPPVPHSWDLDRFMATEFVSV VRDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQIGRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAA AHHSTGVCPPFHILSDDGHDGGGHGPGDHGGQPLM >Mature_194_residues TCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFRNGEFVMGFTDSFRMGQLLRYSLVPPVPHSWDLDRFMATEFVSVV RDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQIGRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAAA HHSTGVCPPFHILSDDGHDGGGHGPGDHGGQPLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20994; Mature: 20862
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFRNGEFVMGFTDSFRMGQLLRYSLV CEEEEEECCCCEEEECCCCCCCCEEEEEEEECCEEEECCCEEEEECCCHHHHHHHHHHCC PPVPHSWDLDRFMATEFVSVVRDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC GRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAAAHHSTGVCPPFHILSDDGHD CCCCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC GGGHGPGDHGGQPLM CCCCCCCCCCCCCCC >Mature Secondary Structure TCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFRNGEFVMGFTDSFRMGQLLRYSLV EEEEEECCCCEEEECCCCCCCCEEEEEEEECCEEEECCCEEEEECCCHHHHHHHHHHCC PPVPHSWDLDRFMATEFVSVVRDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQI CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC GRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAAAHHSTGVCPPFHILSDDGHD CCCCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC GGGHGPGDHGGQPLM CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA