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The map label for this gene is alkB1 [H]

Identifier: 158314026

GI number: 158314026

Start: 2624959

End: 2626221

Strand: Direct

Name: alkB1 [H]

Synonym: Franean1_2192

Alternate gene names: 158314026

Gene position: 2624959-2626221 (Clockwise)

Preceding gene: 158314021

Following gene: 158314027

Centisome position: 29.22

GC content: 72.05

Gene sequence:

>1263_bases
ATGACGGCGCCAGTGCTCGTCGGCCCGGGCGGGGTCGCCTGGCGCGACGGCAAGCGTTACATGTGGCTGACGGCGCTGCT
GCCGCCGCTGCTGCCGATCGTCTCGTTCGGGCTCTGGCACCGCACCGGGTCGGGCCTGCCCTGGTGGCTCACGCCCGCCT
TCGTGTTCGTGCTGTTGCCCGTGCTCGACGCGACGACCCCGAAGGACCCGGTCGGCGCCCCGGAGGGAACCCGCGAGGCG
CTGGACGCCGACCGCTACTACCGCTGGTGCACCTACCTCTATCTACCGCTCGCCGGTGTCGCGCTGCTCATGGGCTGCTG
GGCGTGGACGCGCGGCGACCTGTCGGTGATCGAGCGGGTGGCGGTCGTCCTCGCGCTCGGCACGGTCACCGGGATCGGCA
TCAACACCGCGCACGAGCTGGGCCACAAGCGCGCCCGGGTCGAGCGCCGGCTCGCGAAGGCCATGCTGGCGCCCGCCGCC
TACGGGCACTTCTACGTGGAGCACAACCGGGGCCATCACGTCCACGTCGCGACGCCGCGGGATCCGGCCAGCGCCCGGAT
GGGGGAGAGCTTCTGGCGGTTCTGGCCGCGCACGGTCGTCGGCAGCCTGCGGTCGGCCTGGGCGCTCGAGGCGGCCCGGC
TGCGTCTGCGTGGTCGTTCGCCCTGGTCACCGCGCAACGAGGTGCTTTCCGCCTGGTGCTACACGGTGGTGCTGTTCGGG
GTTCTCGCGGTGGCGTTCGGGCCGGCGGTGCTCGCCTTCCTCGTGCTGCAGGCGGTCGTCGGCTTCTCCCTGCTGGAGTC
GGTCAACTACATCGAGCATTACGGGCTGGCGCGGGAGTGGACCGCGGCCGGCCGGTACGAGAAGGTCGACCCACGGCACA
GCTGGAACAGCGACGACGTCATCAGCAATCTCGCGCTGTACCACCTGCCCCGGCACAGCGATCATCACGCGCACCCCACC
GTGCGCTACCAGTCGCTGCGGTCCTTCGACTCGGCCCCGCAGCTTCCCGCCGGATACGGCTCGATGATCGTCGCATCGCT
GTTCCCCCGGTTCTGGTTCCGAGTCATGGATCCGAGGGTCGCCGCGCACTACGGCGGTGACGTGACCCGAGCCAATCTCG
ACCCCGCGCGGCGCGCGCGGCTCGTCGCCCGCTATGGCGGGGGCGGCGCCGCGGCCGCCGCGCCAGCGGCCGCTTCGCCA
CAGGCCGTTGCGCCCGCTGCGTCGGAGGTCGATGCGTTGCCCGATCGCGTTTCGGCGGGCTGA

Upstream 100 bases:

>100_bases
ACCTGGGTCGATTGTTCCTGTCGGTGGTGGATGTGACACTGCTCGGGCGGACGAGGCGGGGTCCTGGGCAGGCGGGCCCG
GCAGGCTGGGAGGGCGGCAG

Downstream 100 bases:

>100_bases
AGCGGCAAGCCCGAACCGAAAGCCATCACCGCCTTCCCGGAGGTCCCGATTCTTGTCAGTCGGGCCCGGGATCTTCGGCT
GGGCGCTAATCTCATCGCAC

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTAPVLVGPGGVAWRDGKRYMWLTALLPPLLPIVSFGLWHRTGSGLPWWLTPAFVFVLLPVLDATTPKDPVGAPEGTREA
LDADRYYRWCTYLYLPLAGVALLMGCWAWTRGDLSVIERVAVVLALGTVTGIGINTAHELGHKRARVERRLAKAMLAPAA
YGHFYVEHNRGHHVHVATPRDPASARMGESFWRFWPRTVVGSLRSAWALEAARLRLRGRSPWSPRNEVLSAWCYTVVLFG
VLAVAFGPAVLAFLVLQAVVGFSLLESVNYIEHYGLAREWTAAGRYEKVDPRHSWNSDDVISNLALYHLPRHSDHHAHPT
VRYQSLRSFDSAPQLPAGYGSMIVASLFPRFWFRVMDPRVAAHYGGDVTRANLDPARRARLVARYGGGGAAAAAPAAASP
QAVAPAASEVDALPDRVSAG

Sequences:

>Translated_420_residues
MTAPVLVGPGGVAWRDGKRYMWLTALLPPLLPIVSFGLWHRTGSGLPWWLTPAFVFVLLPVLDATTPKDPVGAPEGTREA
LDADRYYRWCTYLYLPLAGVALLMGCWAWTRGDLSVIERVAVVLALGTVTGIGINTAHELGHKRARVERRLAKAMLAPAA
YGHFYVEHNRGHHVHVATPRDPASARMGESFWRFWPRTVVGSLRSAWALEAARLRLRGRSPWSPRNEVLSAWCYTVVLFG
VLAVAFGPAVLAFLVLQAVVGFSLLESVNYIEHYGLAREWTAAGRYEKVDPRHSWNSDDVISNLALYHLPRHSDHHAHPT
VRYQSLRSFDSAPQLPAGYGSMIVASLFPRFWFRVMDPRVAAHYGGDVTRANLDPARRARLVARYGGGGAAAAAPAAASP
QAVAPAASEVDALPDRVSAG
>Mature_419_residues
TAPVLVGPGGVAWRDGKRYMWLTALLPPLLPIVSFGLWHRTGSGLPWWLTPAFVFVLLPVLDATTPKDPVGAPEGTREAL
DADRYYRWCTYLYLPLAGVALLMGCWAWTRGDLSVIERVAVVLALGTVTGIGINTAHELGHKRARVERRLAKAMLAPAAY
GHFYVEHNRGHHVHVATPRDPASARMGESFWRFWPRTVVGSLRSAWALEAARLRLRGRSPWSPRNEVLSAWCYTVVLFGV
LAVAFGPAVLAFLVLQAVVGFSLLESVNYIEHYGLAREWTAAGRYEKVDPRHSWNSDDVISNLALYHLPRHSDHHAHPTV
RYQSLRSFDSAPQLPAGYGSMIVASLFPRFWFRVMDPRVAAHYGGDVTRANLDPARRARLVARYGGGGAAAAAPAAASPQ
AVAPAASEVDALPDRVSAG

Specific function: Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C5-C12 hydrocarbones [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 46057; Mature: 45926

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVLVGPGGVAWRDGKRYMWLTALLPPLLPIVSFGLWHRTGSGLPWWLTPAFVFVLLP
CCCCEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VLDATTPKDPVGAPEGTREALDADRYYRWCTYLYLPLAGVALLMGCWAWTRGDLSVIERV
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVVLALGTVTGIGINTAHELGHKRARVERRLAKAMLAPAAYGHFYVEHNRGHHVHVATPR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCC
DPASARMGESFWRFWPRTVVGSLRSAWALEAARLRLRGRSPWSPRNEVLSAWCYTVVLFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAVAFGPAVLAFLVLQAVVGFSLLESVNYIEHYGLAREWTAAGRYEKVDPRHSWNSDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHH
ISNLALYHLPRHSDHHAHPTVRYQSLRSFDSAPQLPAGYGSMIVASLFPRFWFRVMDPRV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
AAHYGGDVTRANLDPARRARLVARYGGGGAAAAAPAAASPQAVAPAASEVDALPDRVSAG
HHHCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCHHCCCC
>Mature Secondary Structure 
TAPVLVGPGGVAWRDGKRYMWLTALLPPLLPIVSFGLWHRTGSGLPWWLTPAFVFVLLP
CCCEEECCCCCEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
VLDATTPKDPVGAPEGTREALDADRYYRWCTYLYLPLAGVALLMGCWAWTRGDLSVIERV
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVVLALGTVTGIGINTAHELGHKRARVERRLAKAMLAPAAYGHFYVEHNRGHHVHVATPR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECCC
DPASARMGESFWRFWPRTVVGSLRSAWALEAARLRLRGRSPWSPRNEVLSAWCYTVVLFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAVAFGPAVLAFLVLQAVVGFSLLESVNYIEHYGLAREWTAAGRYEKVDPRHSWNSDDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHH
ISNLALYHLPRHSDHHAHPTVRYQSLRSFDSAPQLPAGYGSMIVASLFPRFWFRVMDPRV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
AAHYGGDVTRANLDPARRARLVARYGGGGAAAAAPAAASPQAVAPAASEVDALPDRVSAG
HHHCCCCCEECCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA