| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is kefBC [H]
Identifier: 158314027
GI number: 158314027
Start: 2626404
End: 2627786
Strand: Direct
Name: kefBC [H]
Synonym: Franean1_2193
Alternate gene names: 158314027
Gene position: 2626404-2627786 (Clockwise)
Preceding gene: 158314026
Following gene: 158314032
Centisome position: 29.24
GC content: 72.38
Gene sequence:
>1383_bases GTGACGGCGGCCCCGGTGGCCTCGTTGTCCCATCATTCATTGCTCATTTTTCTTCTTCAGGTGACCGTCCTGTTGTGCCT CGCGCTGGGGCTCGGTCGTCTCGCCATCCGACTCGGGCTGCCCTCCGTGGTCGGCGAACTGCTCGCGGGCGTGGTGGTCG GCCCGTCGCTGCTCGGGGCGGTCGCGTCCGAGTTCTCGGGCTGGCTGCTGCCCGCCGAGCCCGACCAGATGCACCTGCTC GACGCGCTGGGGCAGATCGGCGTGATCCTCCTGGTGGGCCTCACCGGCATCGAGATGGACATGCGGATGGTCCGCCGGCG GGGAGCCACCGCCGCGCGGATCAGCATCGCCGGCCTCGTGCTGCCGGTCGGGCTCGGGATCGGCGCGGGCCTGCTCCTGC CGGAGTCGCTGCTGGCGGACGGCGCCGACCGCGGGGAGTTCGCGCTGTTCCTCGGGGTGGCCATGGGGGTCAGCGCGATC CCCGTCGCGGCCAAGATCCTGCACGACATGCGGCTGCTGCACCGCAACGTCGGCCAGCTCATCCTCGCCTCCGCCACGGT TGACGACGCGGTCGGCTGGTCGTTGCTGTCGGTGGTCTCCGCGATGGCGACAACGGGGGTGCGCGGCGGCGACATCGCGT GGCCGGTGCTCAGCGTGATCGGTGTCGTCGCCGCGGCGTTCGTTGTCGGCCGCCCGCTCGCCCGGCTGGCCGTCGCCGCC GGCGGCCTTGCCAGGCCGTCCGCTGAAACGGCTGAAACGGCTGACACCGGCGGCACCGGATCGGGTTCCGGTATCGCGGT GGCGGTCGTCTTCATCCTCGCCGCGGCCGCCGGGACGCACGCTCTCAAACTGGAGGCGATCCTCGGCGCGTTCATTGCCG GCATCCTGCTCGGGTCCACGCCGACTCTGGACATCCGGCGGCTCGAACCGCTCCGCCTGATGGTCATGGGCGTGCTCGCG CCGATCTTCTTCGCGTCCGCCGGGCTGCGCATCGACCTGACCGCGCTGACCCGGCCGGAGGTGGCGCTCGCCGCCGTCGT GATCCTCGGACTCGCGATCCTGGGCAAGTTCGCCGGTGCCTACATCGGTGCCCGCGCGAGCCGGCTGGGGCACTGGGAGG CGCTCTCGCTGGGCGCGGGCCTGAACGCCCGCGGCGTCATCGAGATCGTCGTGGCCGGCACGGGCCTGCGCCTCGGCGTC CTCTCCACCGCGACGTACACCGTGATCGTCCTGGTGGCGGTCGTGACGTCGATCATGACGCCGCCGATCCTGCGGGCGAC CATGCGCCGGGTGGAGCAGACCGCCGAGGAGCAGCTGCGCGAGCTCGACCTGGCCGGTCGCTCCGTCGGGGCGCCCCGCG GCCTCGACGCCGAACGCCCCTGA
Upstream 100 bases:
>100_bases GCGCTAATCTCATCGCACCTGATTCACCCGGTGGACGGCGAGCTGAAACGACTACGTGGCGGCGGGGGCTGGCGCAGTGA ACGCGACGGAGACGTCATTC
Downstream 100 bases:
>100_bases GGACCGGCCAGCCCCCGGCAAGCGCCCGCTGACCTGCGGGTCAGCGGGCGCTGAGGATCTTCTCGAAGAACTCCCGGTAG CCGCGCAGCGCCTTGCGTAG
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTAAPVASLSHHSLLIFLLQVTVLLCLALGLGRLAIRLGLPSVVGELLAGVVVGPSLLGAVASEFSGWLLPAEPDQMHLL DALGQIGVILLVGLTGIEMDMRMVRRRGATAARISIAGLVLPVGLGIGAGLLLPESLLADGADRGEFALFLGVAMGVSAI PVAAKILHDMRLLHRNVGQLILASATVDDAVGWSLLSVVSAMATTGVRGGDIAWPVLSVIGVVAAAFVVGRPLARLAVAA GGLARPSAETAETADTGGTGSGSGIAVAVVFILAAAAGTHALKLEAILGAFIAGILLGSTPTLDIRRLEPLRLMVMGVLA PIFFASAGLRIDLTALTRPEVALAAVVILGLAILGKFAGAYIGARASRLGHWEALSLGAGLNARGVIEIVVAGTGLRLGV LSTATYTVIVLVAVVTSIMTPPILRATMRRVEQTAEEQLRELDLAGRSVGAPRGLDAERP
Sequences:
>Translated_460_residues MTAAPVASLSHHSLLIFLLQVTVLLCLALGLGRLAIRLGLPSVVGELLAGVVVGPSLLGAVASEFSGWLLPAEPDQMHLL DALGQIGVILLVGLTGIEMDMRMVRRRGATAARISIAGLVLPVGLGIGAGLLLPESLLADGADRGEFALFLGVAMGVSAI PVAAKILHDMRLLHRNVGQLILASATVDDAVGWSLLSVVSAMATTGVRGGDIAWPVLSVIGVVAAAFVVGRPLARLAVAA GGLARPSAETAETADTGGTGSGSGIAVAVVFILAAAAGTHALKLEAILGAFIAGILLGSTPTLDIRRLEPLRLMVMGVLA PIFFASAGLRIDLTALTRPEVALAAVVILGLAILGKFAGAYIGARASRLGHWEALSLGAGLNARGVIEIVVAGTGLRLGV LSTATYTVIVLVAVVTSIMTPPILRATMRRVEQTAEEQLRELDLAGRSVGAPRGLDAERP >Mature_459_residues TAAPVASLSHHSLLIFLLQVTVLLCLALGLGRLAIRLGLPSVVGELLAGVVVGPSLLGAVASEFSGWLLPAEPDQMHLLD ALGQIGVILLVGLTGIEMDMRMVRRRGATAARISIAGLVLPVGLGIGAGLLLPESLLADGADRGEFALFLGVAMGVSAIP VAAKILHDMRLLHRNVGQLILASATVDDAVGWSLLSVVSAMATTGVRGGDIAWPVLSVIGVVAAAFVVGRPLARLAVAAG GLARPSAETAETADTGGTGSGSGIAVAVVFILAAAAGTHALKLEAILGAFIAGILLGSTPTLDIRRLEPLRLMVMGVLAP IFFASAGLRIDLTALTRPEVALAAVVILGLAILGKFAGAYIGARASRLGHWEALSLGAGLNARGVIEIVVAGTGLRLGVL STATYTVIVLVAVVTSIMTPPILRATMRRVEQTAEEQLRELDLAGRSVGAPRGLDAERP
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=439, Percent_Identity=25.7403189066059, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1786685, Length=421, Percent_Identity=27.3159144893112, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322367, Length=467, Percent_Identity=26.1241970021413, Blast_Score=134, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 46815; Mature: 46684
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPVASLSHHSLLIFLLQVTVLLCLALGLGRLAIRLGLPSVVGELLAGVVVGPSLLGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VASEFSGWLLPAEPDQMHLLDALGQIGVILLVGLTGIEMDMRMVRRRGATAARISIAGLV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH LPVGLGIGAGLLLPESLLADGADRGEFALFLGVAMGVSAIPVAAKILHDMRLLHRNVGQL HHHHHCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH ILASATVDDAVGWSLLSVVSAMATTGVRGGDIAWPVLSVIGVVAAAFVVGRPLARLAVAA EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GGLARPSAETAETADTGGTGSGSGIAVAVVFILAAAAGTHALKLEAILGAFIAGILLGST CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PTLDIRRLEPLRLMVMGVLAPIFFASAGLRIDLTALTRPEVALAAVVILGLAILGKFAGA CCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH YIGARASRLGHWEALSLGAGLNARGVIEIVVAGTGLRLGVLSTATYTVIVLVAVVTSIMT HHHHHHHHCCCCHHHECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHC PPILRATMRRVEQTAEEQLRELDLAGRSVGAPRGLDAERP CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TAAPVASLSHHSLLIFLLQVTVLLCLALGLGRLAIRLGLPSVVGELLAGVVVGPSLLGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VASEFSGWLLPAEPDQMHLLDALGQIGVILLVGLTGIEMDMRMVRRRGATAARISIAGLV HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH LPVGLGIGAGLLLPESLLADGADRGEFALFLGVAMGVSAIPVAAKILHDMRLLHRNVGQL HHHHHCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH ILASATVDDAVGWSLLSVVSAMATTGVRGGDIAWPVLSVIGVVAAAFVVGRPLARLAVAA EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GGLARPSAETAETADTGGTGSGSGIAVAVVFILAAAAGTHALKLEAILGAFIAGILLGST CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PTLDIRRLEPLRLMVMGVLAPIFFASAGLRIDLTALTRPEVALAAVVILGLAILGKFAGA CCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH YIGARASRLGHWEALSLGAGLNARGVIEIVVAGTGLRLGVLSTATYTVIVLVAVVTSIMT HHHHHHHHCCCCHHHECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHC PPILRATMRRVEQTAEEQLRELDLAGRSVGAPRGLDAERP CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]