| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is wecB [H]
Identifier: 158313997
GI number: 158313997
Start: 2596239
End: 2597435
Strand: Direct
Name: wecB [H]
Synonym: Franean1_2163
Alternate gene names: 158313997
Gene position: 2596239-2597435 (Clockwise)
Preceding gene: 158313996
Following gene: 158313998
Centisome position: 28.9
GC content: 71.76
Gene sequence:
>1197_bases GTGCCCGACCAGGGCGGTCTGCCCGCGGCCGGCCTGCACGCCGTCGTCATCGCCGGCGCGAGACCGAACTTCATCAAGGT GAAGCCTGTCCTCGACGCGCTGGCGGCCGACGGTGCCCGAAGCAGCTTCGTGCACACGGGGCAGCACTATGACGAGGCGA TGAGTGACGTCTTCTTCGCCGATCTCGGGCTGCGGCAGCCCGACTACCATCTGGAGGCGGGATCCGGCTCGCACGCGGTG CAGACCGCGGCTGTGATGACCGCGTTCGAGCCGCTGCTGGCGCGGCTTGCACCCGATGTCGTCGTGGTCGTCGGCGACGT GAACTCGACGTTGGCGTGCGCGCTCGTCGCGGCGAAGGCGAACGTCCCGGTCGCCCACGTCGAGGCCGGCCTGCGCAGCG GTGACCGGACGATGCCCGAGGAGATCAACCGGATCGTCACAGACCGTGTGTCGGACCTGTTGTTCGCTCCCAGCCCCGAA GGTGTCGTCCACCTCCTCTCCGAGGGTGCGCGACCGGAGTCGGTCCACCTCGCTGGCAATGTCATGGTCGACACGCTGCT CGCCTGCCGGGAGCGGGCCCGTTCCCGCCCCGTGCTCGCCGATCTGGGCCTGACCCCCGGGGAGTACGGCCTGGTGACAC TGCATCGGCCGAGCAACGTCGACGACCCGGCGGTACTCGACGGGCTGCTCACGGCGCTGGGCGAGATCGCGCGCCGCTGC CCGCTGGTGTTCCCCGTTCACCCGCGTACCGCCAGCCGCCTGGCCGGGCGGCTGCCGGACGGGGTGCGGGCACTCGGGCC GGCTGGCTACCTGGACTGCGTCGCGCTTCAGATGGGTGCGCGACTGGTGCTCACCGATTCGGGTGGTGTCCAGGAGGAGT CCACGGTGCTGGGTGTTCCGTGTCTGACCCTGCGGGAGAGCACCGAGCGGCCGATCACGGTCACCGAGGGGACGAACCGG GTGGTGGGCTGTTCTCCAGCGGCGATCATGGCGGGCGCGTTCGAGGTGCTCGACCGCCCACCACCGCCGCGTTGTCCCGA TCTGTGGGACGGGCACGCGGGCCGGCGGATCTCCGCGGTGCTCGGGCGGACCCTCGAACGTCGGGCTCGTCGTGGCGGCG GGTCCCGCCCGCGTGGGCGGGCGGAGGCCGTGCCCGACCCCCTGCTGCCGACATCGCCTGCCGATCGCGGAGCGTGA
Upstream 100 bases:
>100_bases CGGTCGGTCGGCCGCTTTCGTCCGTGCCGGGTATGCCCGCGGTGCGCAAGACAGCCGACGGCCCTGCGCGCGCTCGGACA GCGGCGCCGTGACCGCGCTG
Downstream 100 bases:
>100_bases CACACCGTAATGCTGTTGTGTAGCTGACAGTATTTAGTGAGTCACAATAGGTTCATGACTTCTTCGGGAAAGCTGGTGGT GGTCGGCCAGGGGTACGTAG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPDQGGLPAAGLHAVVIAGARPNFIKVKPVLDALAADGARSSFVHTGQHYDEAMSDVFFADLGLRQPDYHLEAGSGSHAV QTAAVMTAFEPLLARLAPDVVVVVGDVNSTLACALVAAKANVPVAHVEAGLRSGDRTMPEEINRIVTDRVSDLLFAPSPE GVVHLLSEGARPESVHLAGNVMVDTLLACRERARSRPVLADLGLTPGEYGLVTLHRPSNVDDPAVLDGLLTALGEIARRC PLVFPVHPRTASRLAGRLPDGVRALGPAGYLDCVALQMGARLVLTDSGGVQEESTVLGVPCLTLRESTERPITVTEGTNR VVGCSPAAIMAGAFEVLDRPPPPRCPDLWDGHAGRRISAVLGRTLERRARRGGGSRPRGRAEAVPDPLLPTSPADRGA
Sequences:
>Translated_398_residues MPDQGGLPAAGLHAVVIAGARPNFIKVKPVLDALAADGARSSFVHTGQHYDEAMSDVFFADLGLRQPDYHLEAGSGSHAV QTAAVMTAFEPLLARLAPDVVVVVGDVNSTLACALVAAKANVPVAHVEAGLRSGDRTMPEEINRIVTDRVSDLLFAPSPE GVVHLLSEGARPESVHLAGNVMVDTLLACRERARSRPVLADLGLTPGEYGLVTLHRPSNVDDPAVLDGLLTALGEIARRC PLVFPVHPRTASRLAGRLPDGVRALGPAGYLDCVALQMGARLVLTDSGGVQEESTVLGVPCLTLRESTERPITVTEGTNR VVGCSPAAIMAGAFEVLDRPPPPRCPDLWDGHAGRRISAVLGRTLERRARRGGGSRPRGRAEAVPDPLLPTSPADRGA >Mature_397_residues PDQGGLPAAGLHAVVIAGARPNFIKVKPVLDALAADGARSSFVHTGQHYDEAMSDVFFADLGLRQPDYHLEAGSGSHAVQ TAAVMTAFEPLLARLAPDVVVVVGDVNSTLACALVAAKANVPVAHVEAGLRSGDRTMPEEINRIVTDRVSDLLFAPSPEG VVHLLSEGARPESVHLAGNVMVDTLLACRERARSRPVLADLGLTPGEYGLVTLHRPSNVDDPAVLDGLLTALGEIARRCP LVFPVHPRTASRLAGRLPDGVRALGPAGYLDCVALQMGARLVLTDSGGVQEESTVLGVPCLTLRESTERPITVTEGTNRV VGCSPAAIMAGAFEVLDRPPPPRCPDLWDGHAGRRISAVLGRTLERRARRGGGSRPRGRAEAVPDPLLPTSPADRGA
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=339, Percent_Identity=34.5132743362832, Blast_Score=141, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 41750; Mature: 41619
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQGGLPAAGLHAVVIAGARPNFIKVKPVLDALAADGARSSFVHTGQHYDEAMSDVFFA CCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCCHHHHEECCHHHHHHHHHHHHH DLGLRQPDYHLEAGSGSHAVQTAAVMTAFEPLLARLAPDVVVVVGDVNSTLACALVAAKA HCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC NVPVAHVEAGLRSGDRTMPEEINRIVTDRVSDLLFAPSPEGVVHLLSEGARPESVHLAGN CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEEHH VMVDTLLACRERARSRPVLADLGLTPGEYGLVTLHRPSNVDDPAVLDGLLTALGEIARRC HHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC PLVFPVHPRTASRLAGRLPDGVRALGPAGYLDCVALQMGARLVLTDSGGVQEESTVLGVP CEEEECCCCHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCCEEECCC CLTLRESTERPITVTEGTNRVVGCSPAAIMAGAFEVLDRPPPPRCPDLWDGHAGRRISAV CHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LGRTLERRARRGGGSRPRGRAEAVPDPLLPTSPADRGA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDQGGLPAAGLHAVVIAGARPNFIKVKPVLDALAADGARSSFVHTGQHYDEAMSDVFFA CCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCCHHHHEECCHHHHHHHHHHHHH DLGLRQPDYHLEAGSGSHAVQTAAVMTAFEPLLARLAPDVVVVVGDVNSTLACALVAAKA HCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC NVPVAHVEAGLRSGDRTMPEEINRIVTDRVSDLLFAPSPEGVVHLLSEGARPESVHLAGN CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEEEEEHH VMVDTLLACRERARSRPVLADLGLTPGEYGLVTLHRPSNVDDPAVLDGLLTALGEIARRC HHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHC PLVFPVHPRTASRLAGRLPDGVRALGPAGYLDCVALQMGARLVLTDSGGVQEESTVLGVP CEEEECCCCHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCCEEECCC CLTLRESTERPITVTEGTNRVVGCSPAAIMAGAFEVLDRPPPPRCPDLWDGHAGRRISAV CHHHHCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LGRTLERRARRGGGSRPRGRAEAVPDPLLPTSPADRGA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA