| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is insG [H]
Identifier: 158313979
GI number: 158313979
Start: 2575365
End: 2576321
Strand: Direct
Name: insG [H]
Synonym: Franean1_2145
Alternate gene names: 158313979
Gene position: 2575365-2576321 (Clockwise)
Preceding gene: 158313978
Following gene: 158313980
Centisome position: 28.67
GC content: 66.56
Gene sequence:
>957_bases GTGGTGGATTCTTCTGGTCCCGCCCCGGTATGCGGGCGGCTGACCGACCGAATCGGTATCGGCGTACTGACCCGACTGGT GGACCGGGACCTGGTCGACGAGGTGCTCGCTGATACCGGCAAACGTGAGCAGCGAACAAGGCTGCTGCCGGCACGGGTGG TCGTCTACTACGTGATGGCACTGTGTCTGTTCTTCGAGGAGAGCTACGAAGAAGTGATGCGGATCCTCGTGGACGGCCTG CGTTCCCTGGGATCCTGGTCAAAGGACTGGCACGTTCCGACGACCAGTGCCATCAGTAAGGCCCGCACCCGGCTGGGACC CGAGCCCCTGCAGGTGCTGTTTGAACGCGTCGCGGTCCCCTGCGCGCAGCGGGGCACCCGCGGGGCGTGGCTTCGAGGCC GGCGCCTGATGGCGATCGACGGCTTCGTGCTCGACGTCCCCGACACCCCCGACAACGACGCGGCCTTCGGCCGCTCTGGC GGCGAAAAAAGACCCGTCCCCTTCCCGCAGGCCCGCCTCGTCGGCCTCGGCGAATGCGGAACCCACACGATCGTCGCCGC CGAACTCGACTCCTGGCACATCAACGAGCACCGCCTCGCCGAAAAACCAGTCGACAGATTCGAGCCCGGCATGCTCGTCA TCGCCGACCGCGGCTTCTACAGCTTCCTCTTCTGGAAAGACGCCGCCGCCACCGGCGCCGACCTGCTGTTCCGCATGCCC GCCGGCCCCGAACTACCCGTTGTCGAAACCCTCCCCGACGGCTCCTACCTGTCCTTCCTGCTCGACCCGAAAGTCCGGCG CAGACGAGCCGTCCAGAAACACTGCGGATCCACCCTCGTCGAGCCACCCTCCGGCCCCACCGTCCGGGTTATCGAATACG AGGTCACCAACCGCGACGGCAGCGGCGTGCGGTCCCGGTCGAAAGGTATTGCGACGACAGCGTGGCGTACTGCGTGA
Upstream 100 bases:
>100_bases CAGGCTGCTTGCTGATCGTTTTTCTGGCGGGCGATGACGTGGAGGCCGTGGACGACGGCGGTGCGGCGCAGGTCGAAATC CCGGTCGGTAGAATCCCGTT
Downstream 100 bases:
>100_bases CTCTCGAAGAGGCGGTGCGGGTGCGCGATGCGGTCGCTGCGCGGCTGGCGGAATTCGGGATGGAGCTACACCCGGACAAG ACCCGCATCGTGTACTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MVDSSGPAPVCGRLTDRIGIGVLTRLVDRDLVDEVLADTGKREQRTRLLPARVVVYYVMALCLFFEESYEEVMRILVDGL RSLGSWSKDWHVPTTSAISKARTRLGPEPLQVLFERVAVPCAQRGTRGAWLRGRRLMAIDGFVLDVPDTPDNDAAFGRSG GEKRPVPFPQARLVGLGECGTHTIVAAELDSWHINEHRLAEKPVDRFEPGMLVIADRGFYSFLFWKDAAATGADLLFRMP AGPELPVVETLPDGSYLSFLLDPKVRRRRAVQKHCGSTLVEPPSGPTVRVIEYEVTNRDGSGVRSRSKGIATTAWRTA
Sequences:
>Translated_318_residues MVDSSGPAPVCGRLTDRIGIGVLTRLVDRDLVDEVLADTGKREQRTRLLPARVVVYYVMALCLFFEESYEEVMRILVDGL RSLGSWSKDWHVPTTSAISKARTRLGPEPLQVLFERVAVPCAQRGTRGAWLRGRRLMAIDGFVLDVPDTPDNDAAFGRSG GEKRPVPFPQARLVGLGECGTHTIVAAELDSWHINEHRLAEKPVDRFEPGMLVIADRGFYSFLFWKDAAATGADLLFRMP AGPELPVVETLPDGSYLSFLLDPKVRRRRAVQKHCGSTLVEPPSGPTVRVIEYEVTNRDGSGVRSRSKGIATTAWRTA >Mature_318_residues MVDSSGPAPVCGRLTDRIGIGVLTRLVDRDLVDEVLADTGKREQRTRLLPARVVVYYVMALCLFFEESYEEVMRILVDGL RSLGSWSKDWHVPTTSAISKARTRLGPEPLQVLFERVAVPCAQRGTRGAWLRGRRLMAIDGFVLDVPDTPDNDAAFGRSG GEKRPVPFPQARLVGLGECGTHTIVAAELDSWHINEHRLAEKPVDRFEPGMLVIADRGFYSFLFWKDAAATGADLLFRMP AGPELPVVETLPDGSYLSFLLDPKVRRRRAVQKHCGSTLVEPPSGPTVRVIEYEVTNRDGSGVRSRSKGIATTAWRTA
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=248, Percent_Identity=27.4193548387097, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 35182; Mature: 35182
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDSSGPAPVCGRLTDRIGIGVLTRLVDRDLVDEVLADTGKREQRTRLLPARVVVYYVMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LCLFFEESYEEVMRILVDGLRSLGSWSKDWHVPTTSAISKARTRLGPEPLQVLFERVAVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCH CAQRGTRGAWLRGRRLMAIDGFVLDVPDTPDNDAAFGRSGGEKRPVPFPQARLVGLGECG HHHCCCCCHHHCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCC THTIVAAELDSWHINEHRLAEKPVDRFEPGMLVIADRGFYSFLFWKDAAATGADLLFRMP CCEEEEEECCCEECCHHHHHHCCHHHCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECC AGPELPVVETLPDGSYLSFLLDPKVRRRRAVQKHCGSTLVEPPSGPTVRVIEYEVTNRDG CCCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCC SGVRSRSKGIATTAWRTA CCCHHHCCCCCCCCCCCC >Mature Secondary Structure MVDSSGPAPVCGRLTDRIGIGVLTRLVDRDLVDEVLADTGKREQRTRLLPARVVVYYVMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LCLFFEESYEEVMRILVDGLRSLGSWSKDWHVPTTSAISKARTRLGPEPLQVLFERVAVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCH CAQRGTRGAWLRGRRLMAIDGFVLDVPDTPDNDAAFGRSGGEKRPVPFPQARLVGLGECG HHHCCCCCHHHCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCC THTIVAAELDSWHINEHRLAEKPVDRFEPGMLVIADRGFYSFLFWKDAAATGADLLFRMP CCEEEEEECCCEECCHHHHHHCCHHHCCCCEEEEECCCCEEEEEECCCCCCCCCEEEECC AGPELPVVETLPDGSYLSFLLDPKVRRRRAVQKHCGSTLVEPPSGPTVRVIEYEVTNRDG CCCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCC SGVRSRSKGIATTAWRTA CCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]