| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313977
Identifier: 158313977
GI number: 158313977
Start: 2572541
End: 2573773
Strand: Direct
Name: 158313977
Synonym: Franean1_2143
Alternate gene names: NA
Gene position: 2572541-2573773 (Clockwise)
Preceding gene: 158313976
Following gene: 158313978
Centisome position: 28.64
GC content: 58.64
Gene sequence:
>1233_bases GTGATTGTTCCCTGGACAATCCGCCTTCACTACGATCGATGGCCGGTTGGTAACGAGGGAGTCCTCTCAGACCTCAGCCT TCCGTACACATGGTCGCTCAACACGGTGGCACTTATCGGGTTCAGCCTAGGTAGTTCGGCTGCGCTGCGAGGAGGATCCA ACCCAGACAGGCTGCGGACCGTAGATCAGAAGTTGGTGACGAAGTACTTCGCTGTTCTGGCGGCCGGGTTCCTAGCCTCA TTCCTCGTCGCAGGACGACCGCTCGGCTCTTTCTGGAGACTGTCGGGACAATACGACTTCAGCTCCAAAGTCGATACGCG CCCGAGCTTGGGTCCTCTTGACATCCTGCCCACCAGTGCTGTCATCTTCGTCGTGGTCATCGCAGGCATGCGCCGATCCT ACCGACGGTCGCCGACCGCCATTGAACTCGTGGCCTTGGTGGTCACGGCGGTTGTGACGCTTGGCTCGGGTGCGCGCTTC CGATTCATGTTGCTCGTGATCGGGTGGATCATCGTTCAGTTCGTGCCGGCATGGACCCAGAGTAAGCGGCGCTATCGACC CATGCAGGTGTTCATACTCTGTGGAGTGATACTGGGCGGTGGGTTCCTCACGCTTGGAATCATCGGTGACGCCGGATCTC CCAGGAGAGCAGAATCGTCTGCCAGTACGTTCCCCGATCTAGTCGAGACCGGTGTCGACAGCATCGACGTCGTAGGCAGT GCGGAGCTTCTGGTAGCACGAGGGGCCACTCCCGGCCTGCTCGGAGGAAGGTCGTACTACGAGCTCCCGAACAGACTGCT TCCAAAAGCTGTCGTAGGTGATGAGAACAGAACCCCGCCCAGCGTCCTGATTATTCAGGACTATCTGGACAAAAATTCAG GGTACAGCGCCGCCTACTGGTTGGAAAGCGCGCTGAACTTTGGCCGATGGGGGACGTTTTTGTTTTGTGCGGCACTGGCC TTCGGTGCCGTGCGAATACTGGTATGGGCGCAGTTCTCGACCAATGGGATCGGTATCGCGACCTATCTGCTGGGACCGGC GGTGCTGTTCGTCATGTATCAGCTATTGAGCAGGATTGCCACTGAACAGATGCTGCAGACATTCGCCAGCATTGTTCTTG GGATCTGGCTCGGCGTACGTACTTTCAACGACCGTTGTGCTGGTGGCGGGGTGGACGGAGACTCGGACCAGGCCCAGCAC GATTCAACACTGCGCGCCAGAACCTGGGCGTGA
Upstream 100 bases:
>100_bases GGCACTTGCGACATTTTTTCTGGAGTGTCTGAGAACCACCCGTTTTGGGGAGGTGGCATGGTGGACGCCGCAAATCCTCG TTGCGCCATGGGTAGCTCTG
Downstream 100 bases:
>100_bases GTCCGGGTATCGAACATTGGCCTGGCGAACACGACCTGCTCCGCCGGAAAACCGAGTCGGATCCGGCCGCCCCTCGATAC GGATGAACTTCGTCTGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MIVPWTIRLHYDRWPVGNEGVLSDLSLPYTWSLNTVALIGFSLGSSAALRGGSNPDRLRTVDQKLVTKYFAVLAAGFLAS FLVAGRPLGSFWRLSGQYDFSSKVDTRPSLGPLDILPTSAVIFVVVIAGMRRSYRRSPTAIELVALVVTAVVTLGSGARF RFMLLVIGWIIVQFVPAWTQSKRRYRPMQVFILCGVILGGGFLTLGIIGDAGSPRRAESSASTFPDLVETGVDSIDVVGS AELLVARGATPGLLGGRSYYELPNRLLPKAVVGDENRTPPSVLIIQDYLDKNSGYSAAYWLESALNFGRWGTFLFCAALA FGAVRILVWAQFSTNGIGIATYLLGPAVLFVMYQLLSRIATEQMLQTFASIVLGIWLGVRTFNDRCAGGGVDGDSDQAQH DSTLRARTWA
Sequences:
>Translated_410_residues MIVPWTIRLHYDRWPVGNEGVLSDLSLPYTWSLNTVALIGFSLGSSAALRGGSNPDRLRTVDQKLVTKYFAVLAAGFLAS FLVAGRPLGSFWRLSGQYDFSSKVDTRPSLGPLDILPTSAVIFVVVIAGMRRSYRRSPTAIELVALVVTAVVTLGSGARF RFMLLVIGWIIVQFVPAWTQSKRRYRPMQVFILCGVILGGGFLTLGIIGDAGSPRRAESSASTFPDLVETGVDSIDVVGS AELLVARGATPGLLGGRSYYELPNRLLPKAVVGDENRTPPSVLIIQDYLDKNSGYSAAYWLESALNFGRWGTFLFCAALA FGAVRILVWAQFSTNGIGIATYLLGPAVLFVMYQLLSRIATEQMLQTFASIVLGIWLGVRTFNDRCAGGGVDGDSDQAQH DSTLRARTWA >Mature_410_residues MIVPWTIRLHYDRWPVGNEGVLSDLSLPYTWSLNTVALIGFSLGSSAALRGGSNPDRLRTVDQKLVTKYFAVLAAGFLAS FLVAGRPLGSFWRLSGQYDFSSKVDTRPSLGPLDILPTSAVIFVVVIAGMRRSYRRSPTAIELVALVVTAVVTLGSGARF RFMLLVIGWIIVQFVPAWTQSKRRYRPMQVFILCGVILGGGFLTLGIIGDAGSPRRAESSASTFPDLVETGVDSIDVVGS AELLVARGATPGLLGGRSYYELPNRLLPKAVVGDENRTPPSVLIIQDYLDKNSGYSAAYWLESALNFGRWGTFLFCAALA FGAVRILVWAQFSTNGIGIATYLLGPAVLFVMYQLLSRIATEQMLQTFASIVLGIWLGVRTFNDRCAGGGVDGDSDQAQH DSTLRARTWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44488; Mature: 44488
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPWTIRLHYDRWPVGNEGVLSDLSLPYTWSLNTVALIGFSLGSSAALRGGSNPDRLRT CCCEEEEEEEECCCCCCCCCCHHCCCCCEEECCCCEEEEEECCCCCHHCCCCCCHHHHHH VDQKLVTKYFAVLAAGFLASFLVAGRPLGSFWRLSGQYDFSSKVDTRPSLGPLDILPTSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCHHH VIFVVVIAGMRRSYRRSPTAIELVALVVTAVVTLGSGARFRFMLLVIGWIIVQFVPAWTQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SKRRYRPMQVFILCGVILGGGFLTLGIIGDAGSPRRAESSASTFPDLVETGVDSIDVVGS HHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEECCC AELLVARGATPGLLGGRSYYELPNRLLPKAVVGDENRTPPSVLIIQDYLDKNSGYSAAYW CEEEEECCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHH LESALNFGRWGTFLFCAALAFGAVRILVWAQFSTNGIGIATYLLGPAVLFVMYQLLSRIA HHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TEQMLQTFASIVLGIWLGVRTFNDRCAGGGVDGDSDQAQHDSTLRARTWA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHCCCC >Mature Secondary Structure MIVPWTIRLHYDRWPVGNEGVLSDLSLPYTWSLNTVALIGFSLGSSAALRGGSNPDRLRT CCCEEEEEEEECCCCCCCCCCHHCCCCCEEECCCCEEEEEECCCCCHHCCCCCCHHHHHH VDQKLVTKYFAVLAAGFLASFLVAGRPLGSFWRLSGQYDFSSKVDTRPSLGPLDILPTSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCHHH VIFVVVIAGMRRSYRRSPTAIELVALVVTAVVTLGSGARFRFMLLVIGWIIVQFVPAWTQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH SKRRYRPMQVFILCGVILGGGFLTLGIIGDAGSPRRAESSASTFPDLVETGVDSIDVVGS HHHCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEECCC AELLVARGATPGLLGGRSYYELPNRLLPKAVVGDENRTPPSVLIIQDYLDKNSGYSAAYW CEEEEECCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCEEEEEEHHHCCCCCCHHHHH LESALNFGRWGTFLFCAALAFGAVRILVWAQFSTNGIGIATYLLGPAVLFVMYQLLSRIA HHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH TEQMLQTFASIVLGIWLGVRTFNDRCAGGGVDGDSDQAQHDSTLRARTWA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA