| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313976
Identifier: 158313976
GI number: 158313976
Start: 2571283
End: 2572248
Strand: Direct
Name: 158313976
Synonym: Franean1_2142
Alternate gene names: NA
Gene position: 2571283-2572248 (Clockwise)
Preceding gene: 158313974
Following gene: 158313977
Centisome position: 28.63
GC content: 58.07
Gene sequence:
>966_bases GTGTCGTCACGCAAGGCAGTATGGCGTGCGCGCTACTCTCCGTTCATGTCGATTGCCCTGGGTCGGCCCGGCGCGCTCCA GCCTGTATCCCGTGCTGGTGCCACCGCTGCACGGACAACCCTTCGCCACATCCGGAACCATCCAGCCGTGCAGCGCCAAC GGAATCGCGCATGCGCACGATACATCGGATGGCAGATCTGGCAGCGAACGACTCGTCGTCCGGTCACGATCGATCTTCAT GGTTCCGTCCGCCTACGCTGCCATCCGCACAGTACGTCCGCATCGGCAGTGCTCTACTGCAGACTTCCGGACTGGATGGA GATGCGTTTCCTTCTGGACTACTTGAATCCTGGTGACGTATTTGTGGACGTTGGCGCAAACGTCGGTGTCTACACGCTTT TGGCTGCTTCTCTGCCTGGGGTGCATTGCATTGCATTCGAACCGTCTTCCGACTCGTGGGATCAGCTAATTGAGAACATA AATCTGAATCAGTTGTCTCAGGTTGAGGTTCACCGGGTGGCGGTTGGCGATCAATCTGGTGAAATCGATTTCACGATCGG CCACGGCACCGTGAACCAGGTAGCTTCGCCGGACATCGCGAGTAGACGTGAGCGAGTTCCTGTTGTTCGCCTCGACGACG TGGTCCCGCATGATCGGCGTGTAACGTTGATCAAAATTGATGTGGAGGGGCATGAGCCGGCAGTACTTGACGGCGCTCGA GCTCTCATCGAGCGCCTCGCACCGGCACTTCTGGTGGAGTACAACCACCCCGCGCGACTGCGGAGCCTGTTGGACGAACT GGATTACCATCCCGTGGTCTATAATCCCGAAACGCGAGCATTCCGTGCGATAGAGCTCGACCGTGAAAGCCCGAAGAACA TTCTCGCGTTGAAGAAGTCCATACTCGACCAGTATCTCCCAGACAACGGAGTGGGGACTGGCCGGGCGAAGGGTACATCG AAGTGA
Upstream 100 bases:
>100_bases GCGTGCTGTCTGCCGCATCTGTGACCGTCCTCAGTAGCCACCGCACGAACACCAAATGATGTTCCGGAAGTGACTTAACG GACTTCTGTCGGGGCGCGGA
Downstream 100 bases:
>100_bases TGACTGTACCGAGGCGGTCCCTCTGCGCGATGTCACCGTACGGCACTTTCGGCCGATGATGGATGACCCGTCGGCTACGC GGGGTCGTACCGCTCCGATC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase FkbM
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSSRKAVWRARYSPFMSIALGRPGALQPVSRAGATAARTTLRHIRNHPAVQRQRNRACARYIGWQIWQRTTRRPVTIDLH GSVRLRCHPHSTSASAVLYCRLPDWMEMRFLLDYLNPGDVFVDVGANVGVYTLLAASLPGVHCIAFEPSSDSWDQLIENI NLNQLSQVEVHRVAVGDQSGEIDFTIGHGTVNQVASPDIASRRERVPVVRLDDVVPHDRRVTLIKIDVEGHEPAVLDGAR ALIERLAPALLVEYNHPARLRSLLDELDYHPVVYNPETRAFRAIELDRESPKNILALKKSILDQYLPDNGVGTGRAKGTS K
Sequences:
>Translated_321_residues MSSRKAVWRARYSPFMSIALGRPGALQPVSRAGATAARTTLRHIRNHPAVQRQRNRACARYIGWQIWQRTTRRPVTIDLH GSVRLRCHPHSTSASAVLYCRLPDWMEMRFLLDYLNPGDVFVDVGANVGVYTLLAASLPGVHCIAFEPSSDSWDQLIENI NLNQLSQVEVHRVAVGDQSGEIDFTIGHGTVNQVASPDIASRRERVPVVRLDDVVPHDRRVTLIKIDVEGHEPAVLDGAR ALIERLAPALLVEYNHPARLRSLLDELDYHPVVYNPETRAFRAIELDRESPKNILALKKSILDQYLPDNGVGTGRAKGTS K >Mature_320_residues SSRKAVWRARYSPFMSIALGRPGALQPVSRAGATAARTTLRHIRNHPAVQRQRNRACARYIGWQIWQRTTRRPVTIDLHG SVRLRCHPHSTSASAVLYCRLPDWMEMRFLLDYLNPGDVFVDVGANVGVYTLLAASLPGVHCIAFEPSSDSWDQLIENIN LNQLSQVEVHRVAVGDQSGEIDFTIGHGTVNQVASPDIASRRERVPVVRLDDVVPHDRRVTLIKIDVEGHEPAVLDGARA LIERLAPALLVEYNHPARLRSLLDELDYHPVVYNPETRAFRAIELDRESPKNILALKKSILDQYLPDNGVGTGRAKGTSK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35901; Mature: 35770
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRKAVWRARYSPFMSIALGRPGALQPVSRAGATAARTTLRHIRNHPAVQRQRNRACAR CCCCHHHHHHHCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH YIGWQIWQRTTRRPVTIDLHGSVRLRCHPHSTSASAVLYCRLPDWMEMRFLLDYLNPGDV HHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCE FVDVGANVGVYTLLAASLPGVHCIAFEPSSDSWDQLIENINLNQLSQVEVHRVAVGDQSG EEECCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHEEEEEEECCCCC EIDFTIGHGTVNQVASPDIASRRERVPVVRLDDVVPHDRRVTLIKIDVEGHEPAVLDGAR CEEEEECCCCHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHH ALIERLAPALLVEYNHPARLRSLLDELDYHPVVYNPETRAFRAIELDRESPKNILALKKS HHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHH ILDQYLPDNGVGTGRAKGTSK HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SSRKAVWRARYSPFMSIALGRPGALQPVSRAGATAARTTLRHIRNHPAVQRQRNRACAR CCCHHHHHHHCCCCEEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH YIGWQIWQRTTRRPVTIDLHGSVRLRCHPHSTSASAVLYCRLPDWMEMRFLLDYLNPGDV HHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCE FVDVGANVGVYTLLAASLPGVHCIAFEPSSDSWDQLIENINLNQLSQVEVHRVAVGDQSG EEECCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHEEEEEEECCCCC EIDFTIGHGTVNQVASPDIASRRERVPVVRLDDVVPHDRRVTLIKIDVEGHEPAVLDGAR CEEEEECCCCHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHH ALIERLAPALLVEYNHPARLRSLLDELDYHPVVYNPETRAFRAIELDRESPKNILALKKS HHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHH ILDQYLPDNGVGTGRAKGTSK HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA