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The map label for this gene is ybeX [C]

Identifier: 158313948

GI number: 158313948

Start: 2540300

End: 2541754

Strand: Direct

Name: ybeX [C]

Synonym: Franean1_2114

Alternate gene names: 158313948

Gene position: 2540300-2541754 (Clockwise)

Preceding gene: 158313947

Following gene: 158313949

Centisome position: 28.28

GC content: 72.37

Gene sequence:

>1455_bases
ATGGACTCCGGTGATCTTCTCCTCGTCTTCATCGCCGCGGTGACCGCGCTCGCCGCGGCCGGCCTGGGCGCGGTGGACGC
GGCGCTGACCAGGGTCTCCCGGGTCAGCGTCGACGAGTTCGCCCGGCAGGGCAAGACGGGGGCGGCGAACCTCGCCCGGG
TCGTCGCCGACCCCGGGCGCTACCTGGCGTTGTTGTTGCTGCTGCGGATCGCCGGCGAGATGGCCGCGGCGGCCTGCATC
ACCGTCCTGGCCGTGCACGCCTACGGCTCCGGGTTCGCCGCCGTCGGGCTGGGGGCCCTGGTGTCGACGCTCGTCGCCTA
CATCCTCGTCGGCGTGATGTTCCGGACGCTCGGCCGCCAGCACGCCCCGGCGGTGTCGCTGGCCACCGCCGGGCTGACCA
TCCGGCTCGCGAAGGTCTTCGGCCCGCTGCCCCGCCTGCTGATCGCCTTCGGCAACGCGGTGACGCCCGGCCCCGGCTAC
CGGGACGGCCCGTTCGCCTCGGAGGCGGAGCTGCGCGACCTCGTCGACCTCGCCGAGGAGAACGAGGTCATCGAGCCCGA
GGAGCGCGACATGATCGCCTCGGTGTTCGAGCTGGGTGACACGCTCGTCCGCGAGGTGATGGTGCCGCGGCCCGACATGG
TCTTCATCGAGTCCGACAAGACCGTCCGGCAGGCGATCTCGCTGGCGCTGCGCAGCGGCTTCTCCCGCATCCCGGTGATC
GGCGAGAGCATCGACGACGTCGTCGGCATCGGCTTTCTCAAGGACATGGTCGGCTGGGAGCGGGAGGGCCGGGAGAGCAG
CCGGGTCGCGGAGGTCATGCGCCCACCCGTGCTCGTCCCGGAGAGCAAGCCCGCCGACGACCTGCTGCGCGAGATGCAGG
CGTCGCGCACCCACATGGCCATCGTCATCGACGAGTACGGCGGCACGGCCGGCCTGGTGACCATCGAGGACGTCCTCGAG
GAGATCGTCGGTGAGATCACGGACGAGTACGACAGCGCCACGCCGCCGGTCGAGTGGCTCGACGACGACACCGCCCGGGT
GACGGCGCGGCTCGACGTCGACGACCTCGCGGACCTGTTCGGCGTCGAGGAGCTGCCCGGAGCGCAGGACGTCGAGACTG
TCGGCGGGCTGCTCGCGAACGCGCTGGGCCGGGTGCCCATCCCCGGCGCGACGGCGGACGTCGCCGGCCTGCGGCTGTCG
GCAGAGCGCGCGGCCGGGCGGCGCAACCAGATCGGCACCGTCGTCGTCCACCGGCTGTCCCCGGCACCGGGCAACGGCGG
GAACGGAGCCGGCAGGAGCGGAGCCGGCAAGGGCGCCACCGGCAAGGGCGCCACCGGGAGTGACAGCAAGGGCAGCAACG
GCAAGGGCACCAACAGGAAAACCGACGGCAAGAAGACCGACGGCGAGTCGGAGGGCCACCCGCCGGGCCCAGCGAGCAGA
AAGGTGACATCGTGA

Upstream 100 bases:

>100_bases
GCCGGAGGAGGAACGGGAGATGTGGAAGCTCCAGAACAGCCTGCTGGCCTCCTGGGACACCGCGGCCGGCACCGGCGCCT
CCTGACGGGGCCGGGCCGCC

Downstream 100 bases:

>100_bases
CGTCTCCCACCCCGCCGGCCGGCCTCGTCCTTGAGGCCGAGGACGCGAAGCTGGTGGTGCTGGCTCGGTCCGCCCGGCTG
CGCGCGTACACGTCCGCGAG

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MDSGDLLLVFIAAVTALAAAGLGAVDAALTRVSRVSVDEFARQGKTGAANLARVVADPGRYLALLLLLRIAGEMAAAACI
TVLAVHAYGSGFAAVGLGALVSTLVAYILVGVMFRTLGRQHAPAVSLATAGLTIRLAKVFGPLPRLLIAFGNAVTPGPGY
RDGPFASEAELRDLVDLAEENEVIEPEERDMIASVFELGDTLVREVMVPRPDMVFIESDKTVRQAISLALRSGFSRIPVI
GESIDDVVGIGFLKDMVGWEREGRESSRVAEVMRPPVLVPESKPADDLLREMQASRTHMAIVIDEYGGTAGLVTIEDVLE
EIVGEITDEYDSATPPVEWLDDDTARVTARLDVDDLADLFGVEELPGAQDVETVGGLLANALGRVPIPGATADVAGLRLS
AERAAGRRNQIGTVVVHRLSPAPGNGGNGAGRSGAGKGATGKGATGSDSKGSNGKGTNRKTDGKKTDGESEGHPPGPASR
KVTS

Sequences:

>Translated_484_residues
MDSGDLLLVFIAAVTALAAAGLGAVDAALTRVSRVSVDEFARQGKTGAANLARVVADPGRYLALLLLLRIAGEMAAAACI
TVLAVHAYGSGFAAVGLGALVSTLVAYILVGVMFRTLGRQHAPAVSLATAGLTIRLAKVFGPLPRLLIAFGNAVTPGPGY
RDGPFASEAELRDLVDLAEENEVIEPEERDMIASVFELGDTLVREVMVPRPDMVFIESDKTVRQAISLALRSGFSRIPVI
GESIDDVVGIGFLKDMVGWEREGRESSRVAEVMRPPVLVPESKPADDLLREMQASRTHMAIVIDEYGGTAGLVTIEDVLE
EIVGEITDEYDSATPPVEWLDDDTARVTARLDVDDLADLFGVEELPGAQDVETVGGLLANALGRVPIPGATADVAGLRLS
AERAAGRRNQIGTVVVHRLSPAPGNGGNGAGRSGAGKGATGKGATGSDSKGSNGKGTNRKTDGKKTDGESEGHPPGPASR
KVTS
>Mature_484_residues
MDSGDLLLVFIAAVTALAAAGLGAVDAALTRVSRVSVDEFARQGKTGAANLARVVADPGRYLALLLLLRIAGEMAAAACI
TVLAVHAYGSGFAAVGLGALVSTLVAYILVGVMFRTLGRQHAPAVSLATAGLTIRLAKVFGPLPRLLIAFGNAVTPGPGY
RDGPFASEAELRDLVDLAEENEVIEPEERDMIASVFELGDTLVREVMVPRPDMVFIESDKTVRQAISLALRSGFSRIPVI
GESIDDVVGIGFLKDMVGWEREGRESSRVAEVMRPPVLVPESKPADDLLREMQASRTHMAIVIDEYGGTAGLVTIEDVLE
EIVGEITDEYDSATPPVEWLDDDTARVTARLDVDDLADLFGVEELPGAQDVETVGGLLANALGRVPIPGATADVAGLRLS
AERAAGRRNQIGTVVVHRLSPAPGNGGNGAGRSGAGKGATGKGATGSDSKGSNGKGTNRKTDGKKTDGESEGHPPGPASR
KVTS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=404, Percent_Identity=25.2475247524752, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI94681046, Length=297, Percent_Identity=27.6094276094276, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI40068055, Length=356, Percent_Identity=25.561797752809, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI40068053, Length=356, Percent_Identity=25.561797752809, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1786879, Length=245, Percent_Identity=35.9183673469388, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI145693175, Length=384, Percent_Identity=25.5208333333333, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI87082033, Length=233, Percent_Identity=27.0386266094421, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790664, Length=416, Percent_Identity=20.1923076923077, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788119, Length=229, Percent_Identity=31.0043668122271, Blast_Score=76, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50341; Mature: 50341

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGDLLLVFIAAVTALAAAGLGAVDAALTRVSRVSVDEFARQGKTGAANLARVVADPGR
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHH
YLALLLLLRIAGEMAAAACITVLAVHAYGSGFAAVGLGALVSTLVAYILVGVMFRTLGRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HAPAVSLATAGLTIRLAKVFGPLPRLLIAFGNAVTPGPGYRDGPFASEAELRDLVDLAEE
CCCCHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NEVIEPEERDMIASVFELGDTLVREVMVPRPDMVFIESDKTVRQAISLALRSGFSRIPVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCC
GESIDDVVGIGFLKDMVGWEREGRESSRVAEVMRPPVLVPESKPADDLLREMQASRTHMA
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCEEE
IVIDEYGGTAGLVTIEDVLEEIVGEITDEYDSATPPVEWLDDDTARVTARLDVDDLADLF
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCHHHHHHHH
GVEELPGAQDVETVGGLLANALGRVPIPGATADVAGLRLSAERAAGRRNQIGTVVVHRLS
CHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEHHHHCCCCCCCCCEEEEECC
PAPGNGGNGAGRSGAGKGATGKGATGSDSKGSNGKGTNRKTDGKKTDGESEGHPPGPASR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KVTS
CCCC
>Mature Secondary Structure
MDSGDLLLVFIAAVTALAAAGLGAVDAALTRVSRVSVDEFARQGKTGAANLARVVADPGR
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHH
YLALLLLLRIAGEMAAAACITVLAVHAYGSGFAAVGLGALVSTLVAYILVGVMFRTLGRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HAPAVSLATAGLTIRLAKVFGPLPRLLIAFGNAVTPGPGYRDGPFASEAELRDLVDLAEE
CCCCHHHHHCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
NEVIEPEERDMIASVFELGDTLVREVMVPRPDMVFIESDKTVRQAISLALRSGFSRIPVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCC
GESIDDVVGIGFLKDMVGWEREGRESSRVAEVMRPPVLVPESKPADDLLREMQASRTHMA
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCEEE
IVIDEYGGTAGLVTIEDVLEEIVGEITDEYDSATPPVEWLDDDTARVTARLDVDDLADLF
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCHHHHHHHH
GVEELPGAQDVETVGGLLANALGRVPIPGATADVAGLRLSAERAAGRRNQIGTVVVHRLS
CHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEHHHHCCCCCCCCCEEEEECC
PAPGNGGNGAGRSGAGKGATGKGATGSDSKGSNGKGTNRKTDGKKTDGESEGHPPGPASR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KVTS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]