| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is braE [H]
Identifier: 158313874
GI number: 158313874
Start: 2451468
End: 2452904
Strand: Direct
Name: braE [H]
Synonym: Franean1_2039
Alternate gene names: 158313874
Gene position: 2451468-2452904 (Clockwise)
Preceding gene: 158313873
Following gene: 158313875
Centisome position: 27.29
GC content: 74.81
Gene sequence:
>1437_bases ATGGCCCGGCCGTGGGCGGCCCGGTCGGGGGGTGTGCCCTGGCTGGTTGTGGCCAGGTCGCCGGCGGCCCGGCGGCTGGG TGCCTGCCTGTTCCTGGCCGTGATCGCCGCGGTGGTGACGGGCCCGTCCGGGGACGCCGACCGCCCACTGGCGGGGATCG AAGGCTCGCTCACGCCCGCACGGGCGGCCGGGTTCGCTGCCGGGGGACTCGCGCTGTGGGCGCTGTCGATCGGTGCCGAC CGGCTGACGACCCGGCTCCGGTCCGCCGGCCACGGCGCCGCGCTGGGCGGCGGTCGCCTGGCCGCGCTGGGCGGCGGGCT GTGGGTGGCGCCGGCCGGTGCCGCGTGGGCGTCGTTCCGCCGGGGCCGGTGGGCGGCGCCGGCGGGCAACCTGGCGCTGC TCGCCGTCGCCGTGGCGGTCCCGCCGCTGCTGTCCACGGCGGCCCAGCAGGCGCTGGTGAGCGAGATCGGGATCTACGCC CTGCTCGCCCTCGGCCTGAACGTCGTCGTCGGCTACGCCGGACTGCTCGATCTCGGCTACATCGCCTTCTTCGCGATCGG CGCCTACACCACGGCCTACGTGACGTCCGCGGACGCGATGCCCTGGCACGCGCCCTGGCAGGTCAACCCGTTCTTCGCGC TACCCGTCGCACTGGTCGTGGCCGCCGTCGCGGGTGTCGTCCTGGGCGGCCCCACGCTGCGCCTGCGCGGGGACTACCTG GCCATCGTCACCCTCGGGTTCGGCGAGATCGTCCAGTTGCTCGCGAACAACGCCGACGGCGTCACCGGCGGCCCACGCGG CGTGTTCGGCCTGCCGCCGCTGTCGGTCGACCTGCCGGGTGTGCACTACTCCTGGGGCCTGAGGCCGTTGCCCTACTACT ACCTACTCGTCGTCCTGATCGTGCTCGTCATGGTGGTCTTCGGCCGGTGGGAGCGCTCCCGGACCGGCCGGGCCTGGACG GCGATCCGCCAGGACGAGGTGGCCGCCGAGGCCACGGGCGTGGCGACGATGCGGATGAAGCTGCTGGCCTTCGCCGTCGG CGCGTCCGTGTCGGGCTTCGCCGGCGTGGTCCTGGCGACCAAGCAGTTCTTCAACCCGCAGACGTTCGGCCTGCAGTCCT CCCTCCTCGTGCTGACCATCGTGATCTTCGGTGGTATGGGCTCGCGGCTCGGCGTGGTGCTCGGGGCGCTGGTCCTGCAG GGGACGGCCTTCCTCCTGCGCGACACGGTCCCGCCCGCGGACCGCTACATCTACTTCGGCGCAGTGGTGATCCTGATGAT GATCTTCCGTCCGCAGGGCCTGCTGCCGCCGCGGGGCCCGCGGGCACCCGTCAGCCCCGGCCCGGCCGCCGCCCCGGAGC ACCCGGCGGTTCTCACCGAGCGCGCCGGAGCCTCGGGACCAGCCGGGCCCGCAGCGTCGGCCGAGGCGGCGCGGTGA
Upstream 100 bases:
>100_bases CCGGCCCGCGCCGCGGCGGTCGCCCGCGGTCCGGTCGCATTCCGTCCGGGCACGGAAGGCCCAGTCGCGGCGGGCCCAGC TGCGAGAACTGCGGTCGCGG
Downstream 100 bases:
>100_bases CCGGCCGGCCCATCCCCGGCCCGCGGCCGTCGACGACCCTCGGGCCGGTCCTGGACGTCCGCGACGTCACCCTGCGCTTC GGCGGGCTGACCAGCCTGGA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MARPWAARSGGVPWLVVARSPAARRLGACLFLAVIAAVVTGPSGDADRPLAGIEGSLTPARAAGFAAGGLALWALSIGAD RLTTRLRSAGHGAALGGGRLAALGGGLWVAPAGAAWASFRRGRWAAPAGNLALLAVAVAVPPLLSTAAQQALVSEIGIYA LLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYVTSADAMPWHAPWQVNPFFALPVALVVAAVAGVVLGGPTLRLRGDYL AIVTLGFGEIVQLLANNADGVTGGPRGVFGLPPLSVDLPGVHYSWGLRPLPYYYLLVVLIVLVMVVFGRWERSRTGRAWT AIRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLATKQFFNPQTFGLQSSLLVLTIVIFGGMGSRLGVVLGALVLQ GTAFLLRDTVPPADRYIYFGAVVILMMIFRPQGLLPPRGPRAPVSPGPAAAPEHPAVLTERAGASGPAGPAASAEAAR
Sequences:
>Translated_478_residues MARPWAARSGGVPWLVVARSPAARRLGACLFLAVIAAVVTGPSGDADRPLAGIEGSLTPARAAGFAAGGLALWALSIGAD RLTTRLRSAGHGAALGGGRLAALGGGLWVAPAGAAWASFRRGRWAAPAGNLALLAVAVAVPPLLSTAAQQALVSEIGIYA LLALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYVTSADAMPWHAPWQVNPFFALPVALVVAAVAGVVLGGPTLRLRGDYL AIVTLGFGEIVQLLANNADGVTGGPRGVFGLPPLSVDLPGVHYSWGLRPLPYYYLLVVLIVLVMVVFGRWERSRTGRAWT AIRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLATKQFFNPQTFGLQSSLLVLTIVIFGGMGSRLGVVLGALVLQ GTAFLLRDTVPPADRYIYFGAVVILMMIFRPQGLLPPRGPRAPVSPGPAAAPEHPAVLTERAGASGPAGPAASAEAAR >Mature_477_residues ARPWAARSGGVPWLVVARSPAARRLGACLFLAVIAAVVTGPSGDADRPLAGIEGSLTPARAAGFAAGGLALWALSIGADR LTTRLRSAGHGAALGGGRLAALGGGLWVAPAGAAWASFRRGRWAAPAGNLALLAVAVAVPPLLSTAAQQALVSEIGIYAL LALGLNVVVGYAGLLDLGYIAFFAIGAYTTAYVTSADAMPWHAPWQVNPFFALPVALVVAAVAGVVLGGPTLRLRGDYLA IVTLGFGEIVQLLANNADGVTGGPRGVFGLPPLSVDLPGVHYSWGLRPLPYYYLLVVLIVLVMVVFGRWERSRTGRAWTA IRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLATKQFFNPQTFGLQSSLLVLTIVIFGGMGSRLGVVLGALVLQG TAFLLRDTVPPADRYIYFGAVVILMMIFRPQGLLPPRGPRAPVSPGPAAAPEHPAVLTERAGASGPAGPAASAEAAR
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=317, Percent_Identity=41.3249211356467, Blast_Score=193, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 49011; Mature: 48880
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPWAARSGGVPWLVVARSPAARRLGACLFLAVIAAVVTGPSGDADRPLAGIEGSLTPA CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH RAAGFAAGGLALWALSIGADRLTTRLRSAGHGAALGGGRLAALGGGLWVAPAGAAWASFR HHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCHHHHHHH RGRWAAPAGNLALLAVAVAVPPLLSTAAQQALVSEIGIYALLALGLNVVVGYAGLLDLGY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFFAIGAYTTAYVTSADAMPWHAPWQVNPFFALPVALVVAAVAGVVLGGPTLRLRGDYL HHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEE AIVTLGFGEIVQLLANNADGVTGGPRGVFGLPPLSVDLPGVHYSWGLRPLPYYYLLVVLI EEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH VLVMVVFGRWERSRTGRAWTAIRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLAT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KQFFNPQTFGLQSSLLVLTIVIFGGMGSRLGVVLGALVLQGTAFLLRDTVPPADRYIYFG HHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH AVVILMMIFRPQGLLPPRGPRAPVSPGPAAAPEHPAVLTERAGASGPAGPAASAEAAR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARPWAARSGGVPWLVVARSPAARRLGACLFLAVIAAVVTGPSGDADRPLAGIEGSLTPA CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH RAAGFAAGGLALWALSIGADRLTTRLRSAGHGAALGGGRLAALGGGLWVAPAGAAWASFR HHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCHHHHHHH RGRWAAPAGNLALLAVAVAVPPLLSTAAQQALVSEIGIYALLALGLNVVVGYAGLLDLGY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFFAIGAYTTAYVTSADAMPWHAPWQVNPFFALPVALVVAAVAGVVLGGPTLRLRGDYL HHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEE AIVTLGFGEIVQLLANNADGVTGGPRGVFGLPPLSVDLPGVHYSWGLRPLPYYYLLVVLI EEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH VLVMVVFGRWERSRTGRAWTAIRQDEVAAEATGVATMRMKLLAFAVGASVSGFAGVVLAT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KQFFNPQTFGLQSSLLVLTIVIFGGMGSRLGVVLGALVLQGTAFLLRDTVPPADRYIYFG HHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH AVVILMMIFRPQGLLPPRGPRAPVSPGPAAAPEHPAVLTERAGASGPAGPAASAEAAR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]