| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is livK [C]
Identifier: 158313872
GI number: 158313872
Start: 2449126
End: 2450337
Strand: Direct
Name: livK [C]
Synonym: Franean1_2037
Alternate gene names: 158313872
Gene position: 2449126-2450337 (Clockwise)
Preceding gene: 158313871
Following gene: 158313873
Centisome position: 27.27
GC content: 70.54
Gene sequence:
>1212_bases ATGACGGGCAGCCCACGCACCCCTCGACCCAGGACCAGACGGGCCGGGGTCCTGCGGCCGGTCGCCGGGGTGGTCGCGGG CCTGGCGATGGTCGGCGCGGCGTTGACCGCCTGCGGCGGTGGTGACTCGAACGAGGCCGGTACCAAGGAGTTCCTCATCG GCTTCCAGGGACCGCTGTCCGGGGAGAACCAGCAGCTCGGCATCAACGCCTACAACGGCGTGCTGACCGCCGTCGACCTG GCCAACCGCACCGGCGGCCTGCCGTTCACCCTGCGGATCGTCGCCTCCGACGACCAGGGCGTGCCCGAGCAGGGGCCGAC CGCCGCCCAGAAGCTCATCGACAACCCGGACGTCGTCGCGGTCGTCGGCCCGGTGTTCTCCGCGCCGACGAAGGCCAGCG AGCCGCTGTACAGCCAGACAGGCCTGCTGTCGGTCAGCCCGTCGGCGACCGCCCCGGCGCTCACCGACCTCGGGTTCACC AGCTTCTACCGGGTGATCGCACCGGACACCGTGCAGGGCGCCGGCGCCGCCGAGTACCTCGCCAAGGTCGTGAAGGCCAA GCGCGTCTACTCGCTGGACGACCGCAGCGAGTACGGCACCGGCCTCTCCGGCGCCGTCGAGCGCGGCCTGAAGCAGGCGG GCGTCGCCTACACCCACGACGGGATCAACCCGACGAAGGACTACACCTCCCAGGCGACGAAGATCATGGCGGACGGCGCC GACGCCGTCTACTACTCCGGGTACTACTCCGACTTCGCGCTCCTCACGAAGGCGCTGCGCAGCAAGGGGTACGACGGGGC GATCCTCAGCGGCGACGGCTCGAACGACGACCAGTACATCCGCCAGGCCGGCGCGGCGAACGCCGAGGGCACGCTCATCA CCTGCCCCTGCTCGGACGCCAACACCGACCCGGCCGCCACCGGCTTCGTCAGCGAGTACAAGAAGGTCAACAGCGGCCTG AAGCCGGGCACGTACTCCGGCGAGGCCTACGACGCCACCAACGCCATCATCTCGGTGCTGCGCAAGCTCGGGACCGGCGC CAGCCGCGAGTCGGTGCTCGCCGACTTCGGCTCGGTCGACTTCCCCGGGGTGACCAAGCGGATCCGCTTCGAGCGCAACG GTGACGTCCAGGGCTCGACCGTCTACGTGTACCAGGTGAAGGACGGCCAGCGCGTGGTGCTCGGGCCGGTCAGCTCGCTC GTCAAGCCGTGA
Upstream 100 bases:
>100_bases ACACTCTTACTTTCAGCTTTCATCGCTCGGGTGGAGCCGCTAGGTTTCCGCTGCGCGGAGCGCGCCCGCGCGCCGGTGGA AAGCAGCGGAAGGACGTGGC
Downstream 100 bases:
>100_bases CCGGCCGGCGATCACCTTCCCGGCGGGGCCGGGCCCGGCGGGTTCGGAGCCCGCGGGGCCTGGTCCGGCCGGAGCCGCGG CGGAGGGTGGGGCATGGGCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTGSPRTPRPRTRRAGVLRPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAVDL ANRTGGLPFTLRIVASDDQGVPEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFT SFYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYTHDGINPTKDYTSQATKIMADGA DAVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKKVNSGL KPGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGDVQGSTVYVYQVKDGQRVVLGPVSSL VKP
Sequences:
>Translated_403_residues MTGSPRTPRPRTRRAGVLRPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAVDL ANRTGGLPFTLRIVASDDQGVPEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFT SFYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYTHDGINPTKDYTSQATKIMADGA DAVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKKVNSGL KPGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGDVQGSTVYVYQVKDGQRVVLGPVSSL VKP >Mature_402_residues TGSPRTPRPRTRRAGVLRPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLSGENQQLGINAYNGVLTAVDLA NRTGGLPFTLRIVASDDQGVPEQGPTAAQKLIDNPDVVAVVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFTS FYRVIAPDTVQGAGAAEYLAKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYTHDGINPTKDYTSQATKIMADGAD AVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDANTDPAATGFVSEYKKVNSGLK PGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVDFPGVTKRIRFERNGDVQGSTVYVYQVKDGQRVVLGPVSSLV KP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=346, Percent_Identity=28.9017341040462, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI48994941, Length=258, Percent_Identity=32.1705426356589, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41808; Mature: 41677
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSPRTPRPRTRRAGVLRPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLS CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC GENQQLGINAYNGVLTAVDLANRTGGLPFTLRIVASDDQGVPEQGPTAAQKLIDNPDVVA CCCCEECEEHHCCCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEE VVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFTSFYRVIAPDTVQGAGAAEYL EECCHHCCCCCCCCCCHHCCCEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHHHH AKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYTHDGINPTKDYTSQATKIMADGA HHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC DAVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDA CEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEECCCCC NTDPAATGFVSEYKKVNSGLKPGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVD CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC FPGVTKRIRFERNGDVQGSTVYVYQVKDGQRVVLGPVSSLVKP CCCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEECHHHHCCC >Mature Secondary Structure TGSPRTPRPRTRRAGVLRPVAGVVAGLAMVGAALTACGGGDSNEAGTKEFLIGFQGPLS CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC GENQQLGINAYNGVLTAVDLANRTGGLPFTLRIVASDDQGVPEQGPTAAQKLIDNPDVVA CCCCEECEEHHCCCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEE VVGPVFSAPTKASEPLYSQTGLLSVSPSATAPALTDLGFTSFYRVIAPDTVQGAGAAEYL EECCHHCCCCCCCCCCHHCCCEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHHHH AKVVKAKRVYSLDDRSEYGTGLSGAVERGLKQAGVAYTHDGINPTKDYTSQATKIMADGA HHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC DAVYYSGYYSDFALLTKALRSKGYDGAILSGDGSNDDQYIRQAGAANAEGTLITCPCSDA CEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEECCCCC NTDPAATGFVSEYKKVNSGLKPGTYSGEAYDATNAIISVLRKLGTGASRESVLADFGSVD CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC FPGVTKRIRFERNGDVQGSTVYVYQVKDGQRVVLGPVSSLVKP CCCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEECHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]