| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313860
Identifier: 158313860
GI number: 158313860
Start: 2433825
End: 2435093
Strand: Direct
Name: 158313860
Synonym: Franean1_2025
Alternate gene names: NA
Gene position: 2433825-2435093 (Clockwise)
Preceding gene: 158313859
Following gene: 158313866
Centisome position: 27.1
GC content: 70.92
Gene sequence:
>1269_bases GTGCTGGTATTTCGTACGAGGTTGCTCGCCGCGGCGCTCGTGACGGCCGCCCTGGCGGCGGCCTGCGGCTCCAGCGAGTC CTCCGGCGTGGACGCGGCGGCGTCGCCCTGTGCTCCCGGAGTCACGGACGACGAGGTCAACGTCGGTATTGTCTACCCGG ACACCGGTGTGCTCTCGGCACAGTTCACCGGCTACCGGTTCGGCGTCGAGGCCCGGTTCGCCGAGGCGAACGCCGCCGGT GGCGTCGACGGCCGGCAGATCTCGACGATCTGGCGGGACGACGAGTTCGACTCCGCCGGCAACCTGCAGGCGGCCCGCGA GCTTCTCCGCGAGAACGTGTTCGCGGTTCTCGAGTACACCGCGCATTCCGAACAGTCCACGCCGCTGTTGCACGACAAGG GAATTCCGGTGGTGGGCGTCGCGGACCAGGCCGGGTGGGCCGACAACGACAACATGTTCCCGCTCACGTATCAGGTCGAC GACACCGACGCGACCAGCACTCTCGGAGATTTCGTCCGGGCCCAGGGCGGCACCCGCGCGGCCCTCATCACGACGACGAT CACCGAGTCGTCGGTCATGTACGCCCAGAACGCCCGCCGGAGCCTGGAGGCTGCCGGCATCCCGGTCGTCTTCGCGGACA CGAACGCCACGGTGAGCTCACCGGAGGCCGTGCAGCGGATCGTCGGCAGCGGCGCCGACACGCTGATCTCGCTCGCCTCG CTCGACCTCTACTCCGGCGCGGTGACGGCGGCGGCCGCGGCGAACAGGCCGTTCAAGGTGGCGGTCTCGCCCATCACCTA CGACGCGCACCTGCTCAACACGCCGATCGCGCGCGCTCTGGCCGGCACCTACTCGACCGTGGGCTTCAGCGCGATCGAGC GGAACCTGCCCGCGCACCGCGCCTACCTGGCCGCGATGACCACCTACGCGCCGGAGATCCAGCCGCCGACGCAGCTGAGC TCCATCTACGGCTACATCACCGCGGACCTGTTCCTGCGGGGCCTGCAGGGGCAGCAGGGCTGCCCCACCCGCGAGTCGTA CATCCGCGGGCTGCGCGGTGTGACCGACTACGACGGGGGCGGACTGCTCAACCAGCCGGTTGACCTGTCCGCCGGCAAGC GCACGGTCGACCTGTGCACGGACTTCGTCCGGGTCTCCGCCGCCGGGAACGCCTTCGAGCCCGTCGGCGCGAAGCCGCTG TGCGGCCAGGTGATCAGCGGCGCGGCCCAGGGAGGCGCCGGGGCGTCCGTGCCAGCCCGGGGGCGGTGA
Upstream 100 bases:
>100_bases ACCCGGTTCAGCCGCCTGTGGGCGGCGCGGGCGTGCCTGGGCATGCGGCCACCGATTGTCGCCATGTCGCCGAATGTCGT GGAATCTGGAAGGTGGCTTT
Downstream 100 bases:
>100_bases CTCCCGCGGCGACGGTGAGCCCCTGCCGGTGAGCTTGTTCCGGTCAGCCCGTTCCGGTCAGTGCGGCCCAGGCGGCGCGT AGCGCCGGGAGTAGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLVFRTRLLAAALVTAALAAACGSSESSGVDAAASPCAPGVTDDEVNVGIVYPDTGVLSAQFTGYRFGVEARFAEANAAG GVDGRQISTIWRDDEFDSAGNLQAARELLRENVFAVLEYTAHSEQSTPLLHDKGIPVVGVADQAGWADNDNMFPLTYQVD DTDATSTLGDFVRAQGGTRAALITTTITESSVMYAQNARRSLEAAGIPVVFADTNATVSSPEAVQRIVGSGADTLISLAS LDLYSGAVTAAAAANRPFKVAVSPITYDAHLLNTPIARALAGTYSTVGFSAIERNLPAHRAYLAAMTTYAPEIQPPTQLS SIYGYITADLFLRGLQGQQGCPTRESYIRGLRGVTDYDGGGLLNQPVDLSAGKRTVDLCTDFVRVSAAGNAFEPVGAKPL CGQVISGAAQGGAGASVPARGR
Sequences:
>Translated_422_residues MLVFRTRLLAAALVTAALAAACGSSESSGVDAAASPCAPGVTDDEVNVGIVYPDTGVLSAQFTGYRFGVEARFAEANAAG GVDGRQISTIWRDDEFDSAGNLQAARELLRENVFAVLEYTAHSEQSTPLLHDKGIPVVGVADQAGWADNDNMFPLTYQVD DTDATSTLGDFVRAQGGTRAALITTTITESSVMYAQNARRSLEAAGIPVVFADTNATVSSPEAVQRIVGSGADTLISLAS LDLYSGAVTAAAAANRPFKVAVSPITYDAHLLNTPIARALAGTYSTVGFSAIERNLPAHRAYLAAMTTYAPEIQPPTQLS SIYGYITADLFLRGLQGQQGCPTRESYIRGLRGVTDYDGGGLLNQPVDLSAGKRTVDLCTDFVRVSAAGNAFEPVGAKPL CGQVISGAAQGGAGASVPARGR >Mature_422_residues MLVFRTRLLAAALVTAALAAACGSSESSGVDAAASPCAPGVTDDEVNVGIVYPDTGVLSAQFTGYRFGVEARFAEANAAG GVDGRQISTIWRDDEFDSAGNLQAARELLRENVFAVLEYTAHSEQSTPLLHDKGIPVVGVADQAGWADNDNMFPLTYQVD DTDATSTLGDFVRAQGGTRAALITTTITESSVMYAQNARRSLEAAGIPVVFADTNATVSSPEAVQRIVGSGADTLISLAS LDLYSGAVTAAAAANRPFKVAVSPITYDAHLLNTPIARALAGTYSTVGFSAIERNLPAHRAYLAAMTTYAPEIQPPTQLS SIYGYITADLFLRGLQGQQGCPTRESYIRGLRGVTDYDGGGLLNQPVDLSAGKRTVDLCTDFVRVSAAGNAFEPVGAKPL CGQVISGAAQGGAGASVPARGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43808; Mature: 43808
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFRTRLLAAALVTAALAAACGSSESSGVDAAASPCAPGVTDDEVNVGIVYPDTGVLSA CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE QFTGYRFGVEARFAEANAAGGVDGRQISTIWRDDEFDSAGNLQAARELLRENVFAVLEYT ECCCEEECEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEHHHH AHSEQSTPLLHDKGIPVVGVADQAGWADNDNMFPLTYQVDDTDATSTLGDFVRAQGGTRA HCCCCCCCCEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEE ALITTTITESSVMYAQNARRSLEAAGIPVVFADTNATVSSPEAVQRIVGSGADTLISLAS EEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHH LDLYSGAVTAAAAANRPFKVAVSPITYDAHLLNTPIARALAGTYSTVGFSAIERNLPAHR HHHHCCHHHHHHHCCCCEEEEECCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHH AYLAAMTTYAPEIQPPTQLSSIYGYITADLFLRGLQGQQGCPTRESYIRGLRGVTDYDGG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GLLNQPVDLSAGKRTVDLCTDFVRVSAAGNAFEPVGAKPLCGQVISGAAQGGAGASVPAR CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GR CC >Mature Secondary Structure MLVFRTRLLAAALVTAALAAACGSSESSGVDAAASPCAPGVTDDEVNVGIVYPDTGVLSA CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE QFTGYRFGVEARFAEANAAGGVDGRQISTIWRDDEFDSAGNLQAARELLRENVFAVLEYT ECCCEEECEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEHHHH AHSEQSTPLLHDKGIPVVGVADQAGWADNDNMFPLTYQVDDTDATSTLGDFVRAQGGTRA HCCCCCCCCEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEE ALITTTITESSVMYAQNARRSLEAAGIPVVFADTNATVSSPEAVQRIVGSGADTLISLAS EEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHH LDLYSGAVTAAAAANRPFKVAVSPITYDAHLLNTPIARALAGTYSTVGFSAIERNLPAHR HHHHCCHHHHHHHCCCCEEEEECCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHH AYLAAMTTYAPEIQPPTQLSSIYGYITADLFLRGLQGQQGCPTRESYIRGLRGVTDYDGG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GLLNQPVDLSAGKRTVDLCTDFVRVSAAGNAFEPVGAKPLCGQVISGAAQGGAGASVPAR CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA