Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is acoC [H]

Identifier: 158313859

GI number: 158313859

Start: 2431996

End: 2432985

Strand: Direct

Name: acoC [H]

Synonym: Franean1_2024

Alternate gene names: 158313859

Gene position: 2431996-2432985 (Clockwise)

Preceding gene: 158313857

Following gene: 158313860

Centisome position: 27.08

GC content: 76.26

Gene sequence:

>990_bases
ATGAGCGACAGCACGGGCACAGGTGACAGCACGGGCACAGGTGACAGCGCGGGCGCGAGCGGCGAGGCTGGCATGGTCTC
GAAGTGGGTCGACCTGGACGGCCCCGTGCACTACGCGGAGTTCGGCGCGCCCGGAACCATCGGCGGGAGCCCGCCGGTGG
TGTGCGTCCACGGCCTCGGCGGGTCGTACACCAACTGGCTCGCGCTGGCCCCCCTGCTCGCCTCGACGTCCCGCGTGCTC
GCGCCCGACCTCGCCGGCCACGGCCGCACCCCGCTCGGCAACCGCGGTGCCGACGTGTCGGCGAACCACCTCCTGCTGGA
CCGCTTCCTGGCCGAGGTCGTGGGGGAGCCGGTGATCCTCGTCGGGAACTCGATGGGCGGTCTGATCAGCATGCTGCAGG
CGGTCCGTCGCCCGGAGTCGGTGTGCGGGCTGGTCCTGCTGGATCCCGCGCTGCCGCTGCGCCGCGGCGGCTGGCCGGAG
CCGCTGGTCGTCGCGTCGTTCGCCGCCGTGGTCCTCCCGGGACTCGGGGCGTGGGTGCTCGCCCGGCGCCGCGCCCGGGT
CGGCCCCGCCGGCATCGTGGCCCAGACCCTGCGCCTCTGCACGACGGATCCCGCCCGGATCCCGTCCGTCGCGGTCGAGG
CACTGGTCGACCTCGGCCAGGAGCGGGCGGGCATGGACGGGGTCGAGCGCGCCTATGTCGCCGCCGCCCGGTCCGTGGTG
CGCCGGGTCGTCCGCGGCGGCCCGCTGCGGCGGCTGATCCGCCAGGTGGACGTCCCGACGCTGCTCGTGCACGGGTCGGA
CGACCGGCTCATCCCGGTGGCGCTGGCCCGGGACGCCGCCGGCCTGCGTCCCGACTGGCAGCTGGCGGTCGTCGCCGGCT
GCGGGCACCTGCCCCAGCTCGAGGACGCGGCCGGGACGGCCGGGCTCCTGACGGGATGGTGGGAGCAGACGCGGGACGCC
AGCGGCGGCGCGCGGAAAGCAGTGGCGTGA

Upstream 100 bases:

>100_bases
CGGGTGTCGTCCACCGGCGATGCCGGTTCCGGCTCCGGACGGCGCACTAGGCGCCTAACGTCGTTCCGACCGGCGATCGA
GCATGGGGGCTTGCCGAGGC

Downstream 100 bases:

>100_bases
GGCCGCGGAACTGACGGGCCGAGGATCGGGTCTGGCCGGCCGAGGGGTTGTCGTGTGGGTTTTCTCGCATCACCCCGGCT
GTTCCGCCCGACGCCGCCGG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVL
APDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPE
PLVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV
RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDA
SGGARKAVA

Sequences:

>Translated_329_residues
MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVL
APDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPE
PLVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV
RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDA
SGGARKAVA
>Mature_328_residues
SDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLGGSYTNWLALAPLLASTSRVLA
PDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVILVGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEP
LVVASFAAVVLPGLGAWVLARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVVR
RVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQLEDAAGTAGLLTGWWEQTRDAS
GGARKAVA

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 lipoyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003016
- InterPro:   IPR000073
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]

EC number: =2.3.1.12 [H]

Molecular weight: Translated: 33878; Mature: 33747

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEHHCCCCCCCCCCCCEEEEECCC
GSYTNWLALAPLLASTSRVLAPDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVIL
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
VGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEPLVVASFAAVVLPGLGAWVL
EECCHHHHHHHHHHHHCHHHHCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHH
ARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQL
HHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
EDAAGTAGLLTGWWEQTRDASGGARKAVA
HHHCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDSTGTGDSTGTGDSAGASGEAGMVSKWVDLDGPVHYAEFGAPGTIGGSPPVVCVHGLG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEHHCCCCCCCCCCCCEEEEECCC
GSYTNWLALAPLLASTSRVLAPDLAGHGRTPLGNRGADVSANHLLLDRFLAEVVGEPVIL
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
VGNSMGGLISMLQAVRRPESVCGLVLLDPALPLRRGGWPEPLVVASFAAVVLPGLGAWVL
EECCHHHHHHHHHHHHCHHHHCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHCCCHHHHH
ARRRARVGPAGIVAQTLRLCTTDPARIPSVAVEALVDLGQERAGMDGVERAYVAAARSVV
HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRVVRGGPLRRLIRQVDVPTLLVHGSDDRLIPVALARDAAGLRPDWQLAVVAGCGHLPQL
HHHHCCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
EDAAGTAGLLTGWWEQTRDASGGARKAVA
HHHCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7813883 [H]