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The map label for this gene is yobV [H]

Identifier: 158313797

GI number: 158313797

Start: 2358374

End: 2359366

Strand: Direct

Name: yobV [H]

Synonym: Franean1_1962

Alternate gene names: 158313797

Gene position: 2358374-2359366 (Clockwise)

Preceding gene: 158313790

Following gene: 158313798

Centisome position: 26.26

GC content: 76.23

Gene sequence:

>993_bases
ATGCGCTCCAGCCGGCTGATGGCTCTGCTGCTCCATCTGCAGGCGCACGGCCGGGCCACGGCGGGGGAGCTCGCCGCCCA
GTTCGAGGTGTCCGTCCGCACCGTGCGCCGGGACGTGGCCGCGCTCGCCGAAGCGGGTGTCCCACTGTGGTCTGAGCCCG
GCCCGCACGGCGGGATCCGTCTCGTCGAGGGCTGGCGGACGAACCTGGACGGGCTGACCGGCGACGAGGCGTCCGCGCTG
CTCATCGCCGGGGCGGGCGGGGACGTGCTCGGCGGCCTCGGCCTCGAGACGGTCGCCGCGGCCGCGCAGACCAAGATCCT
CGCGACGCTGCCGCCGGAGCTGCGGGCACGGGCGGGCCGGGTCCGGGAACGCTTCCACCTCGACGCGCCGGGCTGGTTCG
GCTCCGAGGAGCCCGTGCCGCACCTCGCGGTCGTCGCGGGCGCGGTCTGGTCCGGGCAGCGGATCACCGTCTGTTACGGG
CGGCCCGACCGGACGGTGGAGCGTTCTCTCGAGCCGCTGGGCCTCGTTCTCAAGGCCGGTGTCTGGTATCTCGTGGCCCG
CGGCGGGTCCGCCGTCCGCAGCTACCGGATCGGCCGGATCGTCGAGGCGGCGGTCCGGAGCGGGCCGGAGGGCCGCTTCA
CCCGGCCCGCCGACTTCCACCTGGCGCGGTGGTGGGCGTCGTCGAACGAGGACTTCGCGCGCTCGCTGCTGCGCTGGCCG
GCGCGGCTGTGGCTGTCCCCGCGAGGCCTGCGGAGCCTGCCCGGAGTGCTCGGCCCGCTGGCCGGCCAGCGGGCGCTGGC
CACGGCCGGCGAGCCCGACGCGGATGGCTGGCGGGAGGTGGAGGTCTGGTTCGAGGGCCCCGATGTCGCCGAGAGCCAGC
TCTGGGCATTCGGCCCGCACGTGCGGGTGCTCGCCCCCGACTCCCTGCGCGAGGCCCTCGCGCGGACGGCACAGCAGGCG
GCGGCGAACAACGGCGCTCCGAAGTCCGGCTGA

Upstream 100 bases:

>100_bases
CGTGCTCGGCTTCGTGGTTGTGCTCGTGTCCGTCGTCATAGGCCCATCGTCGCCGCGGACCCTGACATCTTCTGTCCGGG
TCCGCGGTTACCTTCGGTCA

Downstream 100 bases:

>100_bases
GCTGCCCGCCACACCGGCCCCGCGCCGCGCGCCCGCTCCGCACGCCCGCGCTGCCCGGTCCCGCTCCGTGCCTGGCCCGC
CAGTCCTGTCGCCCGGCCGC

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRSSRLMALLLHLQAHGRATAGELAAQFEVSVRTVRRDVAALAEAGVPLWSEPGPHGGIRLVEGWRTNLDGLTGDEASAL
LIAGAGGDVLGGLGLETVAAAAQTKILATLPPELRARAGRVRERFHLDAPGWFGSEEPVPHLAVVAGAVWSGQRITVCYG
RPDRTVERSLEPLGLVLKAGVWYLVARGGSAVRSYRIGRIVEAAVRSGPEGRFTRPADFHLARWWASSNEDFARSLLRWP
ARLWLSPRGLRSLPGVLGPLAGQRALATAGEPDADGWREVEVWFEGPDVAESQLWAFGPHVRVLAPDSLREALARTAQQA
AANNGAPKSG

Sequences:

>Translated_330_residues
MRSSRLMALLLHLQAHGRATAGELAAQFEVSVRTVRRDVAALAEAGVPLWSEPGPHGGIRLVEGWRTNLDGLTGDEASAL
LIAGAGGDVLGGLGLETVAAAAQTKILATLPPELRARAGRVRERFHLDAPGWFGSEEPVPHLAVVAGAVWSGQRITVCYG
RPDRTVERSLEPLGLVLKAGVWYLVARGGSAVRSYRIGRIVEAAVRSGPEGRFTRPADFHLARWWASSNEDFARSLLRWP
ARLWLSPRGLRSLPGVLGPLAGQRALATAGEPDADGWREVEVWFEGPDVAESQLWAFGPHVRVLAPDSLREALARTAQQA
AANNGAPKSG
>Mature_330_residues
MRSSRLMALLLHLQAHGRATAGELAAQFEVSVRTVRRDVAALAEAGVPLWSEPGPHGGIRLVEGWRTNLDGLTGDEASAL
LIAGAGGDVLGGLGLETVAAAAQTKILATLPPELRARAGRVRERFHLDAPGWFGSEEPVPHLAVVAGAVWSGQRITVCYG
RPDRTVERSLEPLGLVLKAGVWYLVARGGSAVRSYRIGRIVEAAVRSGPEGRFTRPADFHLARWWASSNEDFARSLLRWP
ARLWLSPRGLRSLPGVLGPLAGQRALATAGEPDADGWREVEVWFEGPDVAESQLWAFGPHVRVLAPDSLREALARTAQQA
AANNGAPKSG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35311; Mature: 35311

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSRLMALLLHLQAHGRATAGELAAQFEVSVRTVRRDVAALAEAGVPLWSEPGPHGGIR
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LVEGWRTNLDGLTGDEASALLIAGAGGDVLGGLGLETVAAAAQTKILATLPPELRARAGR
EEECCCCCCCCCCCCCCCEEEEECCCCCHHCCCCHHHHHHHHHHEEEEECCHHHHHHHHH
VRERFHLDAPGWFGSEEPVPHLAVVAGAVWSGQRITVCYGRPDRTVERSLEPLGLVLKAG
HHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHCC
VWYLVARGGSAVRSYRIGRIVEAAVRSGPEGRFTRPADFHLARWWASSNEDFARSLLRWP
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
ARLWLSPRGLRSLPGVLGPLAGQRALATAGEPDADGWREVEVWFEGPDVAESQLWAFGPH
HHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCE
VRVLAPDSLREALARTAQQAAANNGAPKSG
EEEECCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRSSRLMALLLHLQAHGRATAGELAAQFEVSVRTVRRDVAALAEAGVPLWSEPGPHGGIR
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
LVEGWRTNLDGLTGDEASALLIAGAGGDVLGGLGLETVAAAAQTKILATLPPELRARAGR
EEECCCCCCCCCCCCCCCEEEEECCCCCHHCCCCHHHHHHHHHHEEEEECCHHHHHHHHH
VRERFHLDAPGWFGSEEPVPHLAVVAGAVWSGQRITVCYGRPDRTVERSLEPLGLVLKAG
HHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHCC
VWYLVARGGSAVRSYRIGRIVEAAVRSGPEGRFTRPADFHLARWWASSNEDFARSLLRWP
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
ARLWLSPRGLRSLPGVLGPLAGQRALATAGEPDADGWREVEVWFEGPDVAESQLWAFGPH
HHHHCCCCCHHHCCHHHHHCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCE
VRVLAPDSLREALARTAQQAAANNGAPKSG
EEEECCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]