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The map label for this gene is 158313798

Identifier: 158313798

GI number: 158313798

Start: 2359471

End: 2360640

Strand: Direct

Name: 158313798

Synonym: Franean1_1963

Alternate gene names: NA

Gene position: 2359471-2360640 (Clockwise)

Preceding gene: 158313797

Following gene: 158313804

Centisome position: 26.27

GC content: 72.56

Gene sequence:

>1170_bases
ATGTCGAACGTGTGTTCTAATGGCGGGGTGCGGTGGGAGAACCTGAGCCTCGTCGAGTCCGCGGACACCCCGGTGCGCGG
GCTGCTCGACCGCGCCGCGGTGACCCGGACGTTCGACACCCCGGGCTTCGCCGGAATGACCTTCTACGAGATCCACGCGC
GGTCCGCGCTCAATCGCGTCCCGGCGGTATCGCGCGTCCCGTTCCGGTGGACGCTGAACCCCTACCGGGGCTGCTCACAC
GCCTGCCGATACTGCTTCGCCCGCAACACCCACTCCTACCTCGACCTCGACACCGGTCTCGACTTCGATTCCAGGATCGT
CGTCAAGGTCAACGTGGCCGAGCGGCTACGGGCCGAGCTGGCCGCGCCGAAGTGGCGCGGCGAGTCCGTGGCGATGGGTG
CGAACGTCGACCCTTATCAGCGGGTGGAAGGGCGCTACCAGCTCATGCGGGGCGTGCTCGGCGTCCTGCGCGACGCGGCG
AACCCGTTCTCGATCCTCACCAAGGGCACCCTGATCCTGCGTGACCTCGACCTGCTGGCCGAGGCCGCCGCCGTCACCGA
GGTCCGCGTGGCGGTCTCGGTCGGTTTCGTCGACGACGACCTGTGGCGCACGGTCGAGCCGGGAGCCCCCCGCCCGGAAC
GCCGGCTGGAGGTCTGTGCGGCGCTCGGCGCCGCCGGCATCGAGTGCGGGGTGCTGATGGCGCCCGTACTCCCCGGCCTG
AGTGATTCGCCGGCGGCGCTGGAGCGCGCGGTGCGCCGCATCGCCGAGGCGGGTGCGGCCAACGTGACCCCGATCGTGCT
GCACCTGCGGCCCGGGGCGCGGGAGTGGTACCTCGGCTGGCTCGGGGAGCATCACTCCGACCTCCTCCCTCTGTACCGAT
CCCTCTACGGCGGGGGCTCCTACGCGCCGCGGGCCTACAGCGAGCGGATCTCCGCCTTGGTCCGGGACCTGGCCCGCCGG
TACGGCATCGCCGGTGCCGCCGCGCCGGCCGCCTCACCGGCCTCCTCTCGGTGGGCGCCGGCGGAGGCGCGTGGGGTGAG
TGGGGTGCGGGGTGGGCGTGCGGCGGTCATCCACCGTGGTCCGACACGTGCCGTTACGGCGGTGTCCGCGGCGGTGGCCG
GCCGGGCGCCGCTGGAGGAGCAGCTCCTCCTGCCCGGCTTCGGTTCCTGA

Upstream 100 bases:

>100_bases
CCCGCCACACCGGCCCCGCGCCGCGCGCCCGCTCCGCACGCCCGCGCTGCCCGGTCCCGCTCCGTGCCTGGCCCGCCAGT
CCTGTCGCCCGGCCGCGCCG

Downstream 100 bases:

>100_bases
CCGGGCCGCTCGTTCCCCACCACGCGGGCTCGGGCCGCCCGCGTTCCACGCCGCGTGATTCTTCTGTCGAACTGCGGGTG
CGGCACGTAATGCGGTGTCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSNVCSNGGVRWENLSLVESADTPVRGLLDRAAVTRTFDTPGFAGMTFYEIHARSALNRVPAVSRVPFRWTLNPYRGCSH
ACRYCFARNTHSYLDLDTGLDFDSRIVVKVNVAERLRAELAAPKWRGESVAMGANVDPYQRVEGRYQLMRGVLGVLRDAA
NPFSILTKGTLILRDLDLLAEAAAVTEVRVAVSVGFVDDDLWRTVEPGAPRPERRLEVCAALGAAGIECGVLMAPVLPGL
SDSPAALERAVRRIAEAGAANVTPIVLHLRPGAREWYLGWLGEHHSDLLPLYRSLYGGGSYAPRAYSERISALVRDLARR
YGIAGAAAPAASPASSRWAPAEARGVSGVRGGRAAVIHRGPTRAVTAVSAAVAGRAPLEEQLLLPGFGS

Sequences:

>Translated_389_residues
MSNVCSNGGVRWENLSLVESADTPVRGLLDRAAVTRTFDTPGFAGMTFYEIHARSALNRVPAVSRVPFRWTLNPYRGCSH
ACRYCFARNTHSYLDLDTGLDFDSRIVVKVNVAERLRAELAAPKWRGESVAMGANVDPYQRVEGRYQLMRGVLGVLRDAA
NPFSILTKGTLILRDLDLLAEAAAVTEVRVAVSVGFVDDDLWRTVEPGAPRPERRLEVCAALGAAGIECGVLMAPVLPGL
SDSPAALERAVRRIAEAGAANVTPIVLHLRPGAREWYLGWLGEHHSDLLPLYRSLYGGGSYAPRAYSERISALVRDLARR
YGIAGAAAPAASPASSRWAPAEARGVSGVRGGRAAVIHRGPTRAVTAVSAAVAGRAPLEEQLLLPGFGS
>Mature_388_residues
SNVCSNGGVRWENLSLVESADTPVRGLLDRAAVTRTFDTPGFAGMTFYEIHARSALNRVPAVSRVPFRWTLNPYRGCSHA
CRYCFARNTHSYLDLDTGLDFDSRIVVKVNVAERLRAELAAPKWRGESVAMGANVDPYQRVEGRYQLMRGVLGVLRDAAN
PFSILTKGTLILRDLDLLAEAAAVTEVRVAVSVGFVDDDLWRTVEPGAPRPERRLEVCAALGAAGIECGVLMAPVLPGLS
DSPAALERAVRRIAEAGAANVTPIVLHLRPGAREWYLGWLGEHHSDLLPLYRSLYGGGSYAPRAYSERISALVRDLARRY
GIAGAAAPAASPASSRWAPAEARGVSGVRGGRAAVIHRGPTRAVTAVSAAVAGRAPLEEQLLLPGFGS

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41773; Mature: 41642

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVCSNGGVRWENLSLVESADTPVRGLLDRAAVTRTFDTPGFAGMTFYEIHARSALNRV
CCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHC
PAVSRVPFRWTLNPYRGCSHACRYCFARNTHSYLDLDTGLDFDSRIVVKVNVAERLRAEL
CCCCCCCEEEECCHHHCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECHHHHHHHHH
AAPKWRGESVAMGANVDPYQRVEGRYQLMRGVLGVLRDAANPFSILTKGTLILRDLDLLA
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH
EAAAVTEVRVAVSVGFVDDDLWRTVEPGAPRPERRLEVCAALGAAGIECGVLMAPVLPGL
HHHHHHHEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SDSPAALERAVRRIAEAGAANVTPIVLHLRPGAREWYLGWLGEHHSDLLPLYRSLYGGGS
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC
YAPRAYSERISALVRDLARRYGIAGAAAPAASPASSRWAPAEARGVSGVRGGRAAVIHRG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECC
PTRAVTAVSAAVAGRAPLEEQLLLPGFGS
CCHHHHHHHHHHHCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SNVCSNGGVRWENLSLVESADTPVRGLLDRAAVTRTFDTPGFAGMTFYEIHARSALNRV
CCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHC
PAVSRVPFRWTLNPYRGCSHACRYCFARNTHSYLDLDTGLDFDSRIVVKVNVAERLRAEL
CCCCCCCEEEECCHHHCHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECHHHHHHHHH
AAPKWRGESVAMGANVDPYQRVEGRYQLMRGVLGVLRDAANPFSILTKGTLILRDLDLLA
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH
EAAAVTEVRVAVSVGFVDDDLWRTVEPGAPRPERRLEVCAALGAAGIECGVLMAPVLPGL
HHHHHHHEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SDSPAALERAVRRIAEAGAANVTPIVLHLRPGAREWYLGWLGEHHSDLLPLYRSLYGGGS
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC
YAPRAYSERISALVRDLARRYGIAGAAAPAASPASSRWAPAEARGVSGVRGGRAAVIHRG
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECC
PTRAVTAVSAAVAGRAPLEEQLLLPGFGS
CCHHHHHHHHHHHCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]