| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313787
Identifier: 158313787
GI number: 158313787
Start: 2347551
End: 2348879
Strand: Direct
Name: 158313787
Synonym: Franean1_1952
Alternate gene names: NA
Gene position: 2347551-2348879 (Clockwise)
Preceding gene: 158313786
Following gene: 158313790
Centisome position: 26.14
GC content: 74.34
Gene sequence:
>1329_bases ATGACGACCCGACCGACTCCCGCCGGGCGCGAGCGAGAGGCCGGCCGGGTCGACCGGACCGGCCCGCCCCAGCGGGTCCC GGTCCGCCGGGCGCCCCGGCTCCGCCCACTGCGGCGGATCGCCGCCGTCGCCTCCGGGCTGGGCGTGGCCGGGTCGATCC TGCTCACCGGGTGCGTCGCCAGTAGTACCGACGAGACGTCCGGAGCCCGCGCCACGTGCGCGCCGACGCCGGGTGTCACC CCCGACGAGGTCCGCTTCGGGGCCCTCTACCCGGACACCGGCTCCGGTTCGCCGCTGTCCCGCGCGTTCCGGGCCGGCAT CGACGCCAGGCTCGGGGTCGTCAACGGTGCCGGCGGCATCCAGGGGCGGCAGGTGCGGTACGACTGGCGCGACGACGAGT CGACGTCCGACGGCGCACTGCGCGGCGCCCGCCTGCTCGTCGACCGTGACCAGGTCTTCGCGATCGTCGGCACCAGCGGC ATCGCGACCGAGGCGGTGAGCTACCTCGCCGAGCGCGGCGTGCCGACCATCGGCCAGGATCTGACCGCCAGCGGCGACAA CGCCTTCGGCTACTCCAACGTTCTCGGCGGCCAGCTCGGGAACTCGGTCTTCGGAGTGTTCGCCCGTGCGCACGGCGCCA CCCGGGCCGTCCTGCTGCGGACCGAGCAGATCCCCGCCTCGGGGCAGATCGACGAGCGGATCGCCCACAGCCTGCGCGCA GGCTCGGTCGAGGTCGTCGACACCATCGACTGGACGCCGACCGGCTTCGACCTGAACGCCGTCGCGGCCCGGGTCCGCGC GGCCAACGCCGACATGATCACCGGAGTGGTGCCCCCGCAGGCGCTCGCGGACGTCGCGACCGCCGCCCGGCAGGCCGGGG CGACCATCAAGGTCGTGATGGTGCCGATCGGGTACGACCCCGGCCTGCTCGATCGCCGTCCACAGGGCCTGGCCGGCAGC TTCTTCCTCGTCGACTTCGTGCCCTTCGAGGCGGGGACCCCGGCGCACGAGCGCTACCTCGACGCGATGTCCCGCTACGC CCCCCAGATCGAGCGCCGGGAGCAGACCACCGGTCTGGTCGGCTGGATGACCGCCGACCTCTTCCTCCGGGGCCTCGTCG AGGCCGGTCCGTGCCCCACCCGCGCGGGCTACATCGCCGCGCTGCGCAAGGTGGCGGACTACGACGCGGACGGGCTGCTG CCCAGGCCTGTGGACCTCGCGGTGAAGTCCGCGCCCACCGCCTGCGTGAGCGTGGTCCGAGTGTCCCCGGCCGCGGACGC TTTCCAGGTCCAGATGCCCATGGCCCTCTGCGGCGAGGCGCTGAGCTGA
Upstream 100 bases:
>100_bases GCCGGAGTCGTGTTCGGGCCGGACCGGCCCAGGAGGTTCCGCCCGCCCGCGCATCGCGGCGCCCGCACCTGTCGCGGCGC CCGGACATCAGGAGAGACCG
Downstream 100 bases:
>100_bases CGGCCGCGCGCCCGCCCGCGTCCGTCCGTCCGTCAGCTCAGCTGCCCGGCACCCGGCGACGGGCGGGCGCTGAGCCGGCC CAGCGCCCGCCCGGCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTTRPTPAGREREAGRVDRTGPPQRVPVRRAPRLRPLRRIAAVASGLGVAGSILLTGCVASSTDETSGARATCAPTPGVT PDEVRFGALYPDTGSGSPLSRAFRAGIDARLGVVNGAGGIQGRQVRYDWRDDESTSDGALRGARLLVDRDQVFAIVGTSG IATEAVSYLAERGVPTIGQDLTASGDNAFGYSNVLGGQLGNSVFGVFARAHGATRAVLLRTEQIPASGQIDERIAHSLRA GSVEVVDTIDWTPTGFDLNAVAARVRAANADMITGVVPPQALADVATAARQAGATIKVVMVPIGYDPGLLDRRPQGLAGS FFLVDFVPFEAGTPAHERYLDAMSRYAPQIERREQTTGLVGWMTADLFLRGLVEAGPCPTRAGYIAALRKVADYDADGLL PRPVDLAVKSAPTACVSVVRVSPAADAFQVQMPMALCGEALS
Sequences:
>Translated_442_residues MTTRPTPAGREREAGRVDRTGPPQRVPVRRAPRLRPLRRIAAVASGLGVAGSILLTGCVASSTDETSGARATCAPTPGVT PDEVRFGALYPDTGSGSPLSRAFRAGIDARLGVVNGAGGIQGRQVRYDWRDDESTSDGALRGARLLVDRDQVFAIVGTSG IATEAVSYLAERGVPTIGQDLTASGDNAFGYSNVLGGQLGNSVFGVFARAHGATRAVLLRTEQIPASGQIDERIAHSLRA GSVEVVDTIDWTPTGFDLNAVAARVRAANADMITGVVPPQALADVATAARQAGATIKVVMVPIGYDPGLLDRRPQGLAGS FFLVDFVPFEAGTPAHERYLDAMSRYAPQIERREQTTGLVGWMTADLFLRGLVEAGPCPTRAGYIAALRKVADYDADGLL PRPVDLAVKSAPTACVSVVRVSPAADAFQVQMPMALCGEALS >Mature_441_residues TTRPTPAGREREAGRVDRTGPPQRVPVRRAPRLRPLRRIAAVASGLGVAGSILLTGCVASSTDETSGARATCAPTPGVTP DEVRFGALYPDTGSGSPLSRAFRAGIDARLGVVNGAGGIQGRQVRYDWRDDESTSDGALRGARLLVDRDQVFAIVGTSGI ATEAVSYLAERGVPTIGQDLTASGDNAFGYSNVLGGQLGNSVFGVFARAHGATRAVLLRTEQIPASGQIDERIAHSLRAG SVEVVDTIDWTPTGFDLNAVAARVRAANADMITGVVPPQALADVATAARQAGATIKVVMVPIGYDPGLLDRRPQGLAGSF FLVDFVPFEAGTPAHERYLDAMSRYAPQIERREQTTGLVGWMTADLFLRGLVEAGPCPTRAGYIAALRKVADYDADGLLP RPVDLAVKSAPTACVSVVRVSPAADAFQVQMPMALCGEALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46273; Mature: 46142
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRPTPAGREREAGRVDRTGPPQRVPVRRAPRLRPLRRIAAVASGLGVAGSILLTGCVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC SSTDETSGARATCAPTPGVTPDEVRFGALYPDTGSGSPLSRAFRAGIDARLGVVNGAGGI CCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCC QGRQVRYDWRDDESTSDGALRGARLLVDRDQVFAIVGTSGIATEAVSYLAERGVPTIGQD CCCEEEECCCCCCCCCCCHHCCEEEEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCCC LTASGDNAFGYSNVLGGQLGNSVFGVFARAHGATRAVLLRTEQIPASGQIDERIAHSLRA CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCC GSVEVVDTIDWTPTGFDLNAVAARVRAANADMITGVVPPQALADVATAARQAGATIKVVM CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEE VPIGYDPGLLDRRPQGLAGSFFLVDFVPFEAGTPAHERYLDAMSRYAPQIERREQTTGLV EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHH GWMTADLFLRGLVEAGPCPTRAGYIAALRKVADYDADGLLPRPVDLAVKSAPTACVSVVR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHEE VSPAADAFQVQMPMALCGEALS CCCCCCCEEEECCHHHHCCCCC >Mature Secondary Structure TTRPTPAGREREAGRVDRTGPPQRVPVRRAPRLRPLRRIAAVASGLGVAGSILLTGCVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC SSTDETSGARATCAPTPGVTPDEVRFGALYPDTGSGSPLSRAFRAGIDARLGVVNGAGGI CCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCC QGRQVRYDWRDDESTSDGALRGARLLVDRDQVFAIVGTSGIATEAVSYLAERGVPTIGQD CCCEEEECCCCCCCCCCCHHCCEEEEEECCEEEEEEECCCHHHHHHHHHHHCCCCCCCCC LTASGDNAFGYSNVLGGQLGNSVFGVFARAHGATRAVLLRTEQIPASGQIDERIAHSLRA CCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCC GSVEVVDTIDWTPTGFDLNAVAARVRAANADMITGVVPPQALADVATAARQAGATIKVVM CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEE VPIGYDPGLLDRRPQGLAGSFFLVDFVPFEAGTPAHERYLDAMSRYAPQIERREQTTGLV EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHCCHH GWMTADLFLRGLVEAGPCPTRAGYIAALRKVADYDADGLLPRPVDLAVKSAPTACVSVVR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHEE VSPAADAFQVQMPMALCGEALS CCCCCCCEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA