| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313786
Identifier: 158313786
GI number: 158313786
Start: 2346937
End: 2347323
Strand: Direct
Name: 158313786
Synonym: Franean1_1951
Alternate gene names: NA
Gene position: 2346937-2347323 (Clockwise)
Preceding gene: 158313785
Following gene: 158313787
Centisome position: 26.13
GC content: 74.68
Gene sequence:
>387_bases GTGACGGCCGATCGGCCTGGCCCGCCTGGCCCACCCATGCCGCCGGAGCCTGCGGCGGCACGTTCCACGCCGGGCCGGGA GGTCTCCGCCGTCGCCGTCGACCTGGTCGTCCCGGTCGCCGCCTACTACCTGCTCCGCGGCGGGGGAATCGCGCCCGGCC CGGCGCTTCTGCTCGCCCGCACGCCGTGGGGGGCCGGGTTGCTCGTCGACGCCGCGGTGCGCCTCGCGATGGCGCTCGCC CTGCCGGTGGACGTGGTTCCCGCTCTCGGATCCGTGCTGTCGGTGGTCACGTTTGTCGGGCTACAGGTGATCCAGCAGGT CTACTTCGTCCGGGTCGACCTGTGGGGCTCGCTGGCGGACTCGCGCCCGGTCGGGCCCATCGACTGA
Upstream 100 bases:
>100_bases GGGCGACCCGCGCCGACTCCGGCCCGGTTCCCACGGGTGACTCCGAGCACACGCCGCGCGCCGCCACCGAGGGCTCGCCG CGGCCCGGGCAGGGGCCACC
Downstream 100 bases:
>100_bases GGAGTCGACGCGGGCCGGTCCAGCCGCGGGCGCTGGGCCTGGCGGCCGTGATGTTGTACGGTTTGCCCCTAGCCGTACCT AGTATCCCGGTCTATCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTADRPGPPGPPMPPEPAAARSTPGREVSAVAVDLVVPVAAYYLLRGGGIAPGPALLLARTPWGAGLLVDAAVRLAMALA LPVDVVPALGSVLSVVTFVGLQVIQQVYFVRVDLWGSLADSRPVGPID
Sequences:
>Translated_128_residues MTADRPGPPGPPMPPEPAAARSTPGREVSAVAVDLVVPVAAYYLLRGGGIAPGPALLLARTPWGAGLLVDAAVRLAMALA LPVDVVPALGSVLSVVTFVGLQVIQQVYFVRVDLWGSLADSRPVGPID >Mature_127_residues TADRPGPPGPPMPPEPAAARSTPGREVSAVAVDLVVPVAAYYLLRGGGIAPGPALLLARTPWGAGLLVDAAVRLAMALAL PVDVVPALGSVLSVVTFVGLQVIQQVYFVRVDLWGSLADSRPVGPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13069; Mature: 12937
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADRPGPPGPPMPPEPAAARSTPGREVSAVAVDLVVPVAAYYLLRGGGIAPGPALLLAR CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE TPWGAGLLVDAAVRLAMALALPVDVVPALGSVLSVVTFVGLQVIQQVYFVRVDLWGSLAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRPVGPID CCCCCCCC >Mature Secondary Structure TADRPGPPGPPMPPEPAAARSTPGREVSAVAVDLVVPVAAYYLLRGGGIAPGPALLLAR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE TPWGAGLLVDAAVRLAMALALPVDVVPALGSVLSVVTFVGLQVIQQVYFVRVDLWGSLAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRPVGPID CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA