| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313715
Identifier: 158313715
GI number: 158313715
Start: 2257611
End: 2258966
Strand: Direct
Name: 158313715
Synonym: Franean1_1879
Alternate gene names: NA
Gene position: 2257611-2258966 (Clockwise)
Preceding gene: 158313714
Following gene: 158313716
Centisome position: 25.13
GC content: 73.67
Gene sequence:
>1356_bases ATGACGCGCACGGTCGTCCTGAACGGAGGTGACCTCGTCGACGGCCGGGGAGGGGAACCGCGGCGCGACGTCGACATCAT CGTCGTGGGCGACACCATCCGCGAGATCACCCCCACCCGGTCCGCCGAGGCGTACGTCGCCGTTGACGAGATCGTCGACT GCGCCGGAAGGCTGGTGCTTCCGGGCCTCGTCAACAACCACACCCACGGCACCGCGTTCGGGCCGCTGTTCCCCAGCGGG CAGGTGGGCCTGCCGCGCGAGCAGGTGCTGGCCAACCTCGACCGGCACCTGCTGGAGGGGACGACGACGGTGCTCTGCGT GGACGGCTTCGTCACCGCGGCGGATCTCGCCGGCACGGACGAGGCACATCCGGTCAACGTCCGGCTCGCCTCCTGCAACA CCCCGGCCTGCCTGGCGGCGGCGACCATCGTGGACGGCGGCGGTCTCACCGAGGCGAACCGGAGGTTCACCGCGCGACAG GCAGTCGACGCCGGCGCGGTGGCCCTCGGCGAGATCGGGGCCGGGCACACCCTCGGCGGGGGAGGGGCGTGTTACCGGTA CATCCCGGTTGAGATCGAGCGGCGCAGCGGCGTGACGATCACGCCGCGGCAGGCCAGCGGGCTGCGGGACGCGGTGCTGG GCCGGCACATCTCGGCGTCCGCGTTCGACCGGGACGGCGTCGATCGGGCGCTCGCGGACGCGGGGCTGGCGGGCCGACTG TCGGTCGAGGAGGCGCGTGAGATCGTCTCGACCGTCGTGCTGCCGGCCTTCGACGTCGCGCTGCGCGGGCTCACGGAGGC GGCCGACCAGGCCCGTGAGGTGGGCGTCCCGGTGGTGGTGCACAACGCGGCCGCGTCGATGACCCAGGTCGCCGCCATCG CGAGGACCGACGTCCCACTGGTCGCGGGGCACTCGAACCACTCGAGCTTCGGGCTGCGCGAGGCCCTCGACCACGCCGAG CGGCTCAAGGAGCTCGGCGCTGTCCTGGACGTCTCCACCCTCGACACGTTCGGTGCGCGGCGGCTGACGACCGGCCCCGA GCTGCTCTACGCGATGTTCTCCGCGGGGCTGGTCGACACGATCTCGACCGACTACGCGGGCGGCCACCACGACCCGGTCC TGCTCGCGATCGACCGGGCCGTCCGGGCGGGCGTGGTGACCCTGCCGGCTGCGGTCGCGATGGCGACCGCCAACGCCGCG GACGCCATCCCCGGCCTGGCGCCACGCCGTGGCCGCGTCGTCCCCGGGGCCATCGCCGACCTGGTGGTGACAGACCCGGC GGAGCTCCGCGACGTGGGTACTGTCATGGTCGGAGGCAGGTTCGCCGTCCGCGACGGCCGGTGCGTCGCCCGCTGA
Upstream 100 bases:
>100_bases CGGGCGGCCCGGTGAGGGCGGCTCGGTGAAGGCAGGCGGCTGAGGCGGCTGAGGGGAGCGCCGGGGGAGGGCCGGTGCGG GGAAAGGCCTGTGGGGAGGA
Downstream 100 bases:
>100_bases CGGGCCGCCCTCCTGACCGGGCATCCGACGGCCGCCTACCGACTGGACGGCCGACCGGGACGTCCGCCGGCAGGGCACCC GGCCGGAGCGTCGGCCGACC
Product: amidohydrolase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTRTVVLNGGDLVDGRGGEPRRDVDIIVVGDTIREITPTRSAEAYVAVDEIVDCAGRLVLPGLVNNHTHGTAFGPLFPSG QVGLPREQVLANLDRHLLEGTTTVLCVDGFVTAADLAGTDEAHPVNVRLASCNTPACLAAATIVDGGGLTEANRRFTARQ AVDAGAVALGEIGAGHTLGGGGACYRYIPVEIERRSGVTITPRQASGLRDAVLGRHISASAFDRDGVDRALADAGLAGRL SVEEAREIVSTVVLPAFDVALRGLTEAADQAREVGVPVVVHNAAASMTQVAAIARTDVPLVAGHSNHSSFGLREALDHAE RLKELGAVLDVSTLDTFGARRLTTGPELLYAMFSAGLVDTISTDYAGGHHDPVLLAIDRAVRAGVVTLPAAVAMATANAA DAIPGLAPRRGRVVPGAIADLVVTDPAELRDVGTVMVGGRFAVRDGRCVAR
Sequences:
>Translated_451_residues MTRTVVLNGGDLVDGRGGEPRRDVDIIVVGDTIREITPTRSAEAYVAVDEIVDCAGRLVLPGLVNNHTHGTAFGPLFPSG QVGLPREQVLANLDRHLLEGTTTVLCVDGFVTAADLAGTDEAHPVNVRLASCNTPACLAAATIVDGGGLTEANRRFTARQ AVDAGAVALGEIGAGHTLGGGGACYRYIPVEIERRSGVTITPRQASGLRDAVLGRHISASAFDRDGVDRALADAGLAGRL SVEEAREIVSTVVLPAFDVALRGLTEAADQAREVGVPVVVHNAAASMTQVAAIARTDVPLVAGHSNHSSFGLREALDHAE RLKELGAVLDVSTLDTFGARRLTTGPELLYAMFSAGLVDTISTDYAGGHHDPVLLAIDRAVRAGVVTLPAAVAMATANAA DAIPGLAPRRGRVVPGAIADLVVTDPAELRDVGTVMVGGRFAVRDGRCVAR >Mature_450_residues TRTVVLNGGDLVDGRGGEPRRDVDIIVVGDTIREITPTRSAEAYVAVDEIVDCAGRLVLPGLVNNHTHGTAFGPLFPSGQ VGLPREQVLANLDRHLLEGTTTVLCVDGFVTAADLAGTDEAHPVNVRLASCNTPACLAAATIVDGGGLTEANRRFTARQA VDAGAVALGEIGAGHTLGGGGACYRYIPVEIERRSGVTITPRQASGLRDAVLGRHISASAFDRDGVDRALADAGLAGRLS VEEAREIVSTVVLPAFDVALRGLTEAADQAREVGVPVVVHNAAASMTQVAAIARTDVPLVAGHSNHSSFGLREALDHAER LKELGAVLDVSTLDTFGARRLTTGPELLYAMFSAGLVDTISTDYAGGHHDPVLLAIDRAVRAGVVTLPAAVAMATANAAD AIPGLAPRRGRVVPGAIADLVVTDPAELRDVGTVMVGGRFAVRDGRCVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46621; Mature: 46490
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTVVLNGGDLVDGRGGEPRRDVDIIVVGDTIREITPTRSAEAYVAVDEIVDCAGRLVL CCEEEEECCCCEECCCCCCCCCCEEEEEECCHHHHCCCCCCCCEEEEHHHHHHHCCCEEE PGLVNNHTHGTAFGPLFPSGQVGLPREQVLANLDRHLLEGTTTVLCVDGFVTAADLAGTD CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEHHCCCCC EAHPVNVRLASCNTPACLAAATIVDGGGLTEANRRFTARQAVDAGAVALGEIGAGHTLGG CCCEEEEEEECCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCC GGACYRYIPVEIERRSGVTITPRQASGLRDAVLGRHISASAFDRDGVDRALADAGLAGRL CCEEEEEEEEEEECCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC SVEEAREIVSTVVLPAFDVALRGLTEAADQAREVGVPVVVHNAAASMTQVAAIARTDVPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCE VAGHSNHSSFGLREALDHAERLKELGAVLDVSTLDTFGARRLTTGPELLYAMFSAGLVDT EECCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCHHHHHHHHHCCHHHH ISTDYAGGHHDPVLLAIDRAVRAGVVTLPAAVAMATANAADAIPGLAPRRGRVVPGAIAD HCCCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHH LVVTDPAELRDVGTVMVGGRFAVRDGRCVAR EEECCCHHHHHCCEEEECCEEEEECCCEECC >Mature Secondary Structure TRTVVLNGGDLVDGRGGEPRRDVDIIVVGDTIREITPTRSAEAYVAVDEIVDCAGRLVL CEEEEECCCCEECCCCCCCCCCEEEEEECCHHHHCCCCCCCCEEEEHHHHHHHCCCEEE PGLVNNHTHGTAFGPLFPSGQVGLPREQVLANLDRHLLEGTTTVLCVDGFVTAADLAGTD CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEHHCCCCC EAHPVNVRLASCNTPACLAAATIVDGGGLTEANRRFTARQAVDAGAVALGEIGAGHTLGG CCCEEEEEEECCCCCHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCC GGACYRYIPVEIERRSGVTITPRQASGLRDAVLGRHISASAFDRDGVDRALADAGLAGRL CCEEEEEEEEEEECCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC SVEEAREIVSTVVLPAFDVALRGLTEAADQAREVGVPVVVHNAAASMTQVAAIARTDVPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCE VAGHSNHSSFGLREALDHAERLKELGAVLDVSTLDTFGARRLTTGPELLYAMFSAGLVDT EECCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCHHHHHHHHHCCHHHH ISTDYAGGHHDPVLLAIDRAVRAGVVTLPAAVAMATANAADAIPGLAPRRGRVVPGAIAD HCCCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHH LVVTDPAELRDVGTVMVGGRFAVRDGRCVAR EEECCCHHHHHCCEEEECCEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA