| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313660
Identifier: 158313660
GI number: 158313660
Start: 2189019
End: 2189759
Strand: Direct
Name: 158313660
Synonym: Franean1_1824
Alternate gene names: NA
Gene position: 2189019-2189759 (Clockwise)
Preceding gene: 158313659
Following gene: 158313661
Centisome position: 24.37
GC content: 77.87
Gene sequence:
>741_bases GTGAGCACGTCGGACGGGGTGCCCCGGGAGGTCGTCGGCTCGCTCGCCCAGGAGGCGGCGCTGCTGGCGGCGGCCGTCCG GGACTGGGCGGCGGCCAACGGCGGCCCGGACGCCGCGGACGGTCATTTCGACACCGCTGACGGGCAACCCGCCGCCACGG CACCCACCGGCACGGCACCCACCGGCGCAGCCGCCAACGCCACAGCCCCCGGCGCCGCGGGATCGGACGCGCACGGCGGC CGGGACGGCTCCTGGCCATGCTGCGCCTGCCCAGTCTGCCGGGTCCTCACCAGTGTCCGGGAGGAGCACGCGGAGGTCGC GGGCCACCTGGTCGACGCGGCAGTGTCACTGGGCGCGGCGGCGCGTGCCGCCTGGACGGTCTGGGCCGCCAGCGGGCACC GCGGCCAGGCCGCAGGCGAACCTGCCGACCAGGCTGGACCGCGACACGGTGCAACCGGCTGGGAGCGTAGCGAAGCGGCC GCCGGGGATCGGGTTCGTCCGGCCGAGACGGGGCACGGTGGCGGCGCCGACCGCCTTCCCGGGCAGGCGGCGGCGCCGCA CGACAGCGGCGGCCCGGCCGCCCGGGAACGGGGAGCCGGGACCGACCGCGATCCGTTCCCCGCGCCGGGCTTTCCACCAC CAGGCTTCCCACCACCAGGCCGGGGCCGTGAGACGGGCGCCGGCCTTACAACGTCCGCGGGGTCGCCCCGACCCCGCGTC CAGAAGATCGATGTGAGGTGA
Upstream 100 bases:
>100_bases TGCCCGCCGCGCTGCGCCGGTGTGATGTGTCAGGCGCCCGGCTGGCCGAGGAGCGCCTCGTCGTGTCGTTCGTGCCGGAC CCGGCCCAGTGGGTGCGCGC
Downstream 100 bases:
>100_bases GCGCACAGTGACCACCGGGTCAGCGACCGCCCCCGAGGGGGACGGCGACCTGGCGATCGGAGTCGACGTCGGCGGGACGA AAGTTGCCGCCGGTGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSTSDGVPREVVGSLAQEAALLAAAVRDWAAANGGPDAADGHFDTADGQPAATAPTGTAPTGAAANATAPGAAGSDAHGG RDGSWPCCACPVCRVLTSVREEHAEVAGHLVDAAVSLGAAARAAWTVWAASGHRGQAAGEPADQAGPRHGATGWERSEAA AGDRVRPAETGHGGGADRLPGQAAAPHDSGGPAARERGAGTDRDPFPAPGFPPPGFPPPGRGRETGAGLTTSAGSPRPRV QKIDVR
Sequences:
>Translated_246_residues MSTSDGVPREVVGSLAQEAALLAAAVRDWAAANGGPDAADGHFDTADGQPAATAPTGTAPTGAAANATAPGAAGSDAHGG RDGSWPCCACPVCRVLTSVREEHAEVAGHLVDAAVSLGAAARAAWTVWAASGHRGQAAGEPADQAGPRHGATGWERSEAA AGDRVRPAETGHGGGADRLPGQAAAPHDSGGPAARERGAGTDRDPFPAPGFPPPGFPPPGRGRETGAGLTTSAGSPRPRV QKIDVR >Mature_245_residues STSDGVPREVVGSLAQEAALLAAAVRDWAAANGGPDAADGHFDTADGQPAATAPTGTAPTGAAANATAPGAAGSDAHGGR DGSWPCCACPVCRVLTSVREEHAEVAGHLVDAAVSLGAAARAAWTVWAASGHRGQAAGEPADQAGPRHGATGWERSEAAA GDRVRPAETGHGGGADRLPGQAAAPHDSGGPAARERGAGTDRDPFPAPGFPPPGFPPPGRGRETGAGLTTSAGSPRPRVQ KIDVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24162; Mature: 24031
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSDGVPREVVGSLAQEAALLAAAVRDWAAANGGPDAADGHFDTADGQPAATAPTGTAP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGAAANATAPGAAGSDAHGGRDGSWPCCACPVCRVLTSVREEHAEVAGHLVDAAVSLGAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAWTVWAASGHRGQAAGEPADQAGPRHGATGWERSEAAAGDRVRPAETGHGGGADRLP HHHHHHEEECCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC GQAAAPHDSGGPAARERGAGTDRDPFPAPGFPPPGFPPPGRGRETGAGLTTSAGSPRPRV CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QKIDVR EECCCC >Mature Secondary Structure STSDGVPREVVGSLAQEAALLAAAVRDWAAANGGPDAADGHFDTADGQPAATAPTGTAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGAAANATAPGAAGSDAHGGRDGSWPCCACPVCRVLTSVREEHAEVAGHLVDAAVSLGAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAAWTVWAASGHRGQAAGEPADQAGPRHGATGWERSEAAAGDRVRPAETGHGGGADRLP HHHHHHEEECCCCCCCCCCCCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC GQAAAPHDSGGPAARERGAGTDRDPFPAPGFPPPGFPPPGRGRETGAGLTTSAGSPRPRV CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QKIDVR EECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA