| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is glkA [H]
Identifier: 158313661
GI number: 158313661
Start: 2189767
End: 2190738
Strand: Direct
Name: glkA [H]
Synonym: Franean1_1825
Alternate gene names: 158313661
Gene position: 2189767-2190738 (Clockwise)
Preceding gene: 158313660
Following gene: 158313665
Centisome position: 24.38
GC content: 76.03
Gene sequence:
>972_bases GTGACCACCGGGTCAGCGACCGCCCCCGAGGGGGACGGCGACCTGGCGATCGGAGTCGACGTCGGCGGGACGAAAGTTGC CGCCGGTGTCGTCGACGCCCAGGGCAGGATGCTGGCCTCCGCCCGACGGCCCACCCCGAGCCATGCCCCGGCCGAGGTCG CCGACGCCATCGCCGAGCTCGTCGCCGGGCTCCGCCAGGAGTACGACGTCCGCGCCGTGGGCATCGGCGCGGCGGGATGG ATCGACCGCGACCGGTCGACCGTCCTCTTCGCCCCGAACCTGGCCTGGCGCGACGAGCCGCTGCGCGACGTCGTGGCGGA GCGGGTCGGCCTGCCCGTGGTCGTCGAGAACGACGCCAACGCGATGGCCTGGGCCGAGTACCGCTTCGGCGCCGGGCGCG GCCAGGCCGACCTCGTCTGCGTCACCGTCGGCACCGGTATCGGCGGCGGCATTGTCCTGGACGGCCGGCTGCACCGCGGC GCGTTCGGCATCGGCGCCGAGATGGGCCACATGCAGGTGGTCCCGGGCGGCCACCTGTGCGGCTGTGGGAACCGCGGCTG CTGGGAGCAGTACGCCAGCGGACGGGCCCTCGTCCGGGTCGCCCAGGAGATGGCCACCGCGTCCCCGGAGGCCGCCCGCA CGATGCTGGCCGGTCGCTCCGTCGAGGAGCTGAGCGGGCCGGACGTCACCACCGCCGCCCAGGACGGCGACCCGGCCGCG GTGAAGTGCTTCGAGGAGATCGGCCACTGGCTCGGCCAGGGCCTGGCGAGCCTGACGGCGATCCTCGACCCGGGCCGGTT CGTCATCGGTGGCGGCGTATCGGACGCGGGGGAGCTGCTGGTCGGGCCCGCCCGCGCCCAGTACCGGGCGGGGCTGTCGG GCCGCGGGCACCGGCCGGAGGCCGACGTGGTGGTGGCCACCCTCGGCTCCTCCGCCGGCATCGTCGGCGCCGCCGACCTC GCCCGCATGTAG
Upstream 100 bases:
>100_bases CCACCACCAGGCCGGGGCCGTGAGACGGGCGCCGGCCTTACAACGTCCGCGGGGTCGCCCCGACCCCGCGTCCAGAAGAT CGATGTGAGGTGAGCGCACA
Downstream 100 bases:
>100_bases ACGTCGGAGCTCCCGTCTGGTGCGTTTCGCCGCGGATCAGGTCTTGTAGTCGGGGACGAGCTCGGTCGCCAGCTGCTCGA GAAAGAGGCCGGCGTCGGCG
Product: ROK family glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTTGSATAPEGDGDLAIGVDVGGTKVAAGVVDAQGRMLASARRPTPSHAPAEVADAIAELVAGLRQEYDVRAVGIGAAGW IDRDRSTVLFAPNLAWRDEPLRDVVAERVGLPVVVENDANAMAWAEYRFGAGRGQADLVCVTVGTGIGGGIVLDGRLHRG AFGIGAEMGHMQVVPGGHLCGCGNRGCWEQYASGRALVRVAQEMATASPEAARTMLAGRSVEELSGPDVTTAAQDGDPAA VKCFEEIGHWLGQGLASLTAILDPGRFVIGGGVSDAGELLVGPARAQYRAGLSGRGHRPEADVVVATLGSSAGIVGAADL ARM
Sequences:
>Translated_323_residues MTTGSATAPEGDGDLAIGVDVGGTKVAAGVVDAQGRMLASARRPTPSHAPAEVADAIAELVAGLRQEYDVRAVGIGAAGW IDRDRSTVLFAPNLAWRDEPLRDVVAERVGLPVVVENDANAMAWAEYRFGAGRGQADLVCVTVGTGIGGGIVLDGRLHRG AFGIGAEMGHMQVVPGGHLCGCGNRGCWEQYASGRALVRVAQEMATASPEAARTMLAGRSVEELSGPDVTTAAQDGDPAA VKCFEEIGHWLGQGLASLTAILDPGRFVIGGGVSDAGELLVGPARAQYRAGLSGRGHRPEADVVVATLGSSAGIVGAADL ARM >Mature_322_residues TTGSATAPEGDGDLAIGVDVGGTKVAAGVVDAQGRMLASARRPTPSHAPAEVADAIAELVAGLRQEYDVRAVGIGAAGWI DRDRSTVLFAPNLAWRDEPLRDVVAERVGLPVVVENDANAMAWAEYRFGAGRGQADLVCVTVGTGIGGGIVLDGRLHRGA FGIGAEMGHMQVVPGGHLCGCGNRGCWEQYASGRALVRVAQEMATASPEAARTMLAGRSVEELSGPDVTTAAQDGDPAAV KCFEEIGHWLGQGLASLTAILDPGRFVIGGGVSDAGELLVGPARAQYRAGLSGRGHRPEADVVVATLGSSAGIVGAADLA RM
Specific function: Required for glucose repression of many different genes [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=266, Percent_Identity=30.0751879699248, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI298566325, Length=266, Percent_Identity=30.0751879699248, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI4885285, Length=266, Percent_Identity=30.0751879699248, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI190014632, Length=266, Percent_Identity=30.0751879699248, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI1786891, Length=271, Percent_Identity=26.9372693726937, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1787363, Length=273, Percent_Identity=30.7692307692308, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787878, Length=211, Percent_Identity=31.7535545023697, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI87081733, Length=322, Percent_Identity=29.5031055900621, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082230, Length=263, Percent_Identity=33.8403041825095, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1790522, Length=325, Percent_Identity=24, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87082127, Length=277, Percent_Identity=24.187725631769, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 32910; Mature: 32778
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGSATAPEGDGDLAIGVDVGGTKVAAGVVDAQGRMLASARRPTPSHAPAEVADAIAEL CCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHH VAGLRQEYDVRAVGIGAAGWIDRDRSTVLFAPNLAWRDEPLRDVVAERVGLPVVVENDAN HHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCC AMAWAEYRFGAGRGQADLVCVTVGTGIGGGIVLDGRLHRGAFGIGAEMGHMQVVPGGHLC EEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCEECCCEEECCCCCCCEEECCCCCEE GCGNRGCWEQYASGRALVRVAQEMATASPEAARTMLAGRSVEELSGPDVTTAAQDGDPAA CCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCEECCCCCCHHH VKCFEEIGHWLGQGLASLTAILDPGRFVIGGGVSDAGELLVGPARAQYRAGLSGRGHRPE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCHHHHHCCCCCCCCCCC ADVVVATLGSSAGIVGAADLARM CCEEEEECCCCCCCEECHHHHCC >Mature Secondary Structure TTGSATAPEGDGDLAIGVDVGGTKVAAGVVDAQGRMLASARRPTPSHAPAEVADAIAEL CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHH VAGLRQEYDVRAVGIGAAGWIDRDRSTVLFAPNLAWRDEPLRDVVAERVGLPVVVENDAN HHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCC AMAWAEYRFGAGRGQADLVCVTVGTGIGGGIVLDGRLHRGAFGIGAEMGHMQVVPGGHLC EEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCEECCCEEECCCCCCCEEECCCCCEE GCGNRGCWEQYASGRALVRVAQEMATASPEAARTMLAGRSVEELSGPDVTTAAQDGDPAA CCCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCEECCCCCCHHH VKCFEEIGHWLGQGLASLTAILDPGRFVIGGGVSDAGELLVGPARAQYRAGLSGRGHRPE HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEECCCHHHHHCCCCCCCCCCC ADVVVATLGSSAGIVGAADLARM CCEEEEECCCCCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1435260; 12000953 [H]