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The map label for this gene is qcrB [H]

Identifier: 158313648

GI number: 158313648

Start: 2174427

End: 2176067

Strand: Direct

Name: qcrB [H]

Synonym: Franean1_1812

Alternate gene names: 158313648

Gene position: 2174427-2176067 (Clockwise)

Preceding gene: 158313647

Following gene: 158313651

Centisome position: 24.21

GC content: 68.25

Gene sequence:

>1641_bases
ATGACCGCCGAACCCGCCTCCGTGACCACTCCGAAGTTCCAGAAGCGGCCGACGCCGGCGCGCAAGGCCAACCGGGCCAT
CGACGAACGGTTCGGGACGCAGGCGGCCATCCGCCGCAACCTGAACAAGGTCTTCCCGGACCACTGGTCGTTCATGATCG
GTGAGATCGCGCTCTACAGCTTCGTCATCCTGCTGCTGACCGGGATCTACCTGACGCTGTTCTTCGACCCGTCGAACGTC
GAGATCATCTACAACGGCTCGTACGTGCCGCTCAAGGGCGTCGAGATGAGCCGGGCCTACGCGTCGACGCTGGACATCAG
CTTCGACACCCGGGCCGGCCTGGTGTTCCGCCAGATCCACCACTGGGCGGCGCTGATCTTCGCCGCCTCCATCGTGGTGC
ACCTGCTGCGGGTGTTCTTCACCGGTGCCTACCGCAAGCCCCGCGAGGTCAACTGGCTGATCGGCGTCGGCCTGCTGATG
CTGGCCCTGGTCGAGGGCTTCGCCGGCTACTCGCTGCCGGACGACCTGCTCTCCGGCACCGGTCTGCGGATCGCGGCGTC
GATCGCCCAGTCCATCCCGATCATCGGGACGTGGGCGTCGTTCCTGGTGTTCAACGGCGAGTTCCCGGGTGAGAACTTCA
TCCCGCGGCTCTATGTCGTGCACATCCTGCTCGTGCCGGGCGTGCTGCTCGCGCTGATCGGCGCCCACCTGGGCATCCTG
TGGCACCAGAAGCACACCGACTTCCCCGGCCCGGGCAAGACCGAGCACAACGTGGTCGGCCACCGGGTGTTCCCGGTGTT
CGCGGTGAAGTCCGGCGGCTTCTTCATGCTGACTTTCGCGGTGCTCGCGCTGCTGGGCGGCCTCGCCCAGATCAACCCGA
TCTGGACGTTCGGCCCCTACGACCCGGCCAAGGTCAGCTCGGCGTCCCAGCCCGACTGGTACATCGGCTTCCTGGACGGC
TCCACCCGGCTCATGCCGCCGTGGGAGTTCCGCGGGTGGGGTCACACGATCCCGCCGCTGCTGTGGCCGACGGCGGTCCT
GCCGGGCGTCCTGTTCACGCTGCTGGCGGTCTACCCGTTCCTGGAGGCGAAGTTCACCGGGGACAAGGCGTCGCACAACC
TGCTGCAGCGCCCGCGGGAGGCACCGACCCGCACGGCGCTCGGCGCGATGAGCATCAGCTTCTACCTGGTGCTGTGGATC
TCCGGTGGCAACGACATCATCGCCCACACGTTCAGCATCTCGCTGAACGCGATGACCTGGGCGGGCCGGATCGGGCTGAT
CGTCGTGCCGCCGATCGCCTACGTGGTCACCAAGAAGCTCTGCATCCACCTCAACGAGCGGGACGCGGAGATCGCCGCGC
ACGGCATCGAGACGGGCATCATCCGCCAGCTGCCCAACGGCGAGTTCGTCGAGGACCATCGGCCCAAGCCGCCGGCGGTG
CCCGACTACCCGGTCGTGCCGAACGACCGGTTCGCGCTCACGGCCGGTGACGGCCACGGCAACGGGACCGGCCAGCACGG
CACGGGCCTGGCACGCCGGGCCGGCAAGGCCGTCGGCGGGTTCTTCACCGAGGAGTCGGAGAAGCCGGCGGACGGCGAGG
GCGCAGACTCGGCGGTGGGCGGCGGTCAGACCAAGCACTGA

Upstream 100 bases:

>100_bases
CGCTGCCGCAGCTCGCCATCGCGGTGGATGACGAGGGCTACTTCATCGCCCGTGACGGGGACTACACCGAGCCCGTCGGC
GCCGCGTTCTGGGAGCGCTC

Downstream 100 bases:

>100_bases
GGTAAGCCACCAGGCTCGACCCGGAGGCACACTCGAGAACAGGCACGCTGAAGCACCGAGGGGCCGTTCCCGTCATCGAC
GGGGGCGGCCCCTAGCGCTG

Product: cytochrome b/b6 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MTAEPASVTTPKFQKRPTPARKANRAIDERFGTQAAIRRNLNKVFPDHWSFMIGEIALYSFVILLLTGIYLTLFFDPSNV
EIIYNGSYVPLKGVEMSRAYASTLDISFDTRAGLVFRQIHHWAALIFAASIVVHLLRVFFTGAYRKPREVNWLIGVGLLM
LALVEGFAGYSLPDDLLSGTGLRIAASIAQSIPIIGTWASFLVFNGEFPGENFIPRLYVVHILLVPGVLLALIGAHLGIL
WHQKHTDFPGPGKTEHNVVGHRVFPVFAVKSGGFFMLTFAVLALLGGLAQINPIWTFGPYDPAKVSSASQPDWYIGFLDG
STRLMPPWEFRGWGHTIPPLLWPTAVLPGVLFTLLAVYPFLEAKFTGDKASHNLLQRPREAPTRTALGAMSISFYLVLWI
SGGNDIIAHTFSISLNAMTWAGRIGLIVVPPIAYVVTKKLCIHLNERDAEIAAHGIETGIIRQLPNGEFVEDHRPKPPAV
PDYPVVPNDRFALTAGDGHGNGTGQHGTGLARRAGKAVGGFFTEESEKPADGEGADSAVGGGQTKH

Sequences:

>Translated_546_residues
MTAEPASVTTPKFQKRPTPARKANRAIDERFGTQAAIRRNLNKVFPDHWSFMIGEIALYSFVILLLTGIYLTLFFDPSNV
EIIYNGSYVPLKGVEMSRAYASTLDISFDTRAGLVFRQIHHWAALIFAASIVVHLLRVFFTGAYRKPREVNWLIGVGLLM
LALVEGFAGYSLPDDLLSGTGLRIAASIAQSIPIIGTWASFLVFNGEFPGENFIPRLYVVHILLVPGVLLALIGAHLGIL
WHQKHTDFPGPGKTEHNVVGHRVFPVFAVKSGGFFMLTFAVLALLGGLAQINPIWTFGPYDPAKVSSASQPDWYIGFLDG
STRLMPPWEFRGWGHTIPPLLWPTAVLPGVLFTLLAVYPFLEAKFTGDKASHNLLQRPREAPTRTALGAMSISFYLVLWI
SGGNDIIAHTFSISLNAMTWAGRIGLIVVPPIAYVVTKKLCIHLNERDAEIAAHGIETGIIRQLPNGEFVEDHRPKPPAV
PDYPVVPNDRFALTAGDGHGNGTGQHGTGLARRAGKAVGGFFTEESEKPADGEGADSAVGGGQTKH
>Mature_545_residues
TAEPASVTTPKFQKRPTPARKANRAIDERFGTQAAIRRNLNKVFPDHWSFMIGEIALYSFVILLLTGIYLTLFFDPSNVE
IIYNGSYVPLKGVEMSRAYASTLDISFDTRAGLVFRQIHHWAALIFAASIVVHLLRVFFTGAYRKPREVNWLIGVGLLML
ALVEGFAGYSLPDDLLSGTGLRIAASIAQSIPIIGTWASFLVFNGEFPGENFIPRLYVVHILLVPGVLLALIGAHLGILW
HQKHTDFPGPGKTEHNVVGHRVFPVFAVKSGGFFMLTFAVLALLGGLAQINPIWTFGPYDPAKVSSASQPDWYIGFLDGS
TRLMPPWEFRGWGHTIPPLLWPTAVLPGVLFTLLAVYPFLEAKFTGDKASHNLLQRPREAPTRTALGAMSISFYLVLWIS
GGNDIIAHTFSISLNAMTWAGRIGLIVVPPIAYVVTKKLCIHLNERDAEIAAHGIETGIIRQLPNGEFVEDHRPKPPAVP
DYPVVPNDRFALTAGDGHGNGTGQHGTGLARRAGKAVGGFFTEESEKPADGEGADSAVGGGQTKH

Specific function: Unknown

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59529; Mature: 59397

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEPASVTTPKFQKRPTPARKANRAIDERFGTQAAIRRNLNKVFPDHWSFMIGEIALYS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVILLLTGIYLTLFFDPSNVEIIYNGSYVPLKGVEMSRAYASTLDISFDTRAGLVFRQIH
HHHHHHHHHHEEEEECCCCEEEEECCCCCEECCCHHHHHHHHHEEEECCCHHHHHHHHHH
HWAALIFAASIVVHLLRVFFTGAYRKPREVNWLIGVGLLMLALVEGFAGYSLPDDLLSGT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
GLRIAASIAQSIPIIGTWASFLVFNGEFPGENFIPRLYVVHILLVPGVLLALIGAHLGIL
CHHHHHHHHHCCCCEEECHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
WHQKHTDFPGPGKTEHNVVGHRVFPVFAVKSGGFFMLTFAVLALLGGLAQINPIWTFGPY
EECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCEEEECCC
DPAKVSSASQPDWYIGFLDGSTRLMPPWEFRGWGHTIPPLLWPTAVLPGVLFTLLAVYPF
CCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEAKFTGDKASHNLLQRPREAPTRTALGAMSISFYLVLWISGGNDIIAHTFSISLNAMTW
HHHEECCCHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCEEEEEEEEEEEEEEE
AGRIGLIVVPPIAYVVTKKLCIHLNERDAEIAAHGIETGIIRQLPNGEFVEDHRPKPPAV
CCCCCEEEECHHHHHHHHHHHEEECCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC
PDYPVVPNDRFALTAGDGHGNGTGQHGTGLARRAGKAVGGFFTEESEKPADGEGADSAVG
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GGQTKH
CCCCCC
>Mature Secondary Structure 
TAEPASVTTPKFQKRPTPARKANRAIDERFGTQAAIRRNLNKVFPDHWSFMIGEIALYS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVILLLTGIYLTLFFDPSNVEIIYNGSYVPLKGVEMSRAYASTLDISFDTRAGLVFRQIH
HHHHHHHHHHEEEEECCCCEEEEECCCCCEECCCHHHHHHHHHEEEECCCHHHHHHHHHH
HWAALIFAASIVVHLLRVFFTGAYRKPREVNWLIGVGLLMLALVEGFAGYSLPDDLLSGT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
GLRIAASIAQSIPIIGTWASFLVFNGEFPGENFIPRLYVVHILLVPGVLLALIGAHLGIL
CHHHHHHHHHCCCCEEECHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
WHQKHTDFPGPGKTEHNVVGHRVFPVFAVKSGGFFMLTFAVLALLGGLAQINPIWTFGPY
EECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCEEEECCC
DPAKVSSASQPDWYIGFLDGSTRLMPPWEFRGWGHTIPPLLWPTAVLPGVLFTLLAVYPF
CCHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEAKFTGDKASHNLLQRPREAPTRTALGAMSISFYLVLWISGGNDIIAHTFSISLNAMTW
HHHEECCCHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCEEEEEEEEEEEEEEE
AGRIGLIVVPPIAYVVTKKLCIHLNERDAEIAAHGIETGIIRQLPNGEFVEDHRPKPPAV
CCCCCEEEECHHHHHHHHHHHEEECCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC
PDYPVVPNDRFALTAGDGHGNGTGQHGTGLARRAGKAVGGFFTEESEKPADGEGADSAVG
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
GGQTKH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002; 2181404 [H]