| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is metK2 [H]
Identifier: 158313552
GI number: 158313552
Start: 2050678
End: 2051874
Strand: Direct
Name: metK2 [H]
Synonym: Franean1_1716
Alternate gene names: 158313552
Gene position: 2050678-2051874 (Clockwise)
Preceding gene: 158313551
Following gene: 158313553
Centisome position: 22.83
GC content: 70.26
Gene sequence:
>1197_bases GTGGCGACGCGCCTTTTCACGTCCGAGTCCGTCACGGAAGGACACCCGGACAAGATCGCTGACCAGGTCAGCGACTCCAT TCTCGATGCCATGCTCAAGGACGACCCGAAGAGCCGGGTCGCCGTCGAGACCATGATCACCACCGGTCAGGTGCACGTGG CCGGCGAGGTGACCACCAAGACCTACGTCGACATCGCCTCGGTGGTCCGCGAGCGGATCCTGGAGATCGGTTACGACTCC TCCAAGAAGGGCTTCGACGGCGCCTCCTGCGGCGTGAGCGTCTCGATCGGCTCGCAGTCGCCCGACATCGCCCAGGGTGT CGACACCGCCCACGAGGCGCGCGTCGAGGGCTCCACCGAGGACGACCTCGACCGTCAGGGCGCCGGCGACCAGGGCCTGA TGTTCGGGTTCGCCTGCGACGAGACCCCCGAGCTCATGCCGCTGCCGATCGCCCTGGCACACCGGCTCGCCCGGCGGCTG TCCGCCGTCCGCAAGGACGGCCAGGTCGGCTACCTGCGCCCCGACGGCAAGACGCAGGTCACCATCGAGTACGAGGACGG CAAGCCGGTCCGCCTGGACACCGTTGTGGTCTCCTCGCAGCACGCGGCCGACATCGACCTCGACACCCTGCTCGCGCCCG ACGTCGCCGAGTACGTCGTGGAGCCGGAGCTCGCCCTCCTCGAGATCAGCACCGAGGGGCGCCGCCTGCTGGTGAACCCG ACCGGTCGCTTCGAGATCGGTGGCCCGATGGGCGACGCCGGCCTCACCGGGCGCAAGATCATCGTGGACACCTACGGCGG GTACGCCCGGCACGGCGGCGGCGCCTTCTCGGGTAAGGACCCGTCCAAGGTCGACCGCTCGGCTGCCTACGCCATGCGCT GGGTCGCCAAGAACGTCGTGGCCGCGGGCCTGGCCAGCCGCTGTGAGGTCCAGGTCGCCTACGCGATCGGCAAGGCCCAC CCGGTCGGCCTGTTCGTCGAGACCTTCGGCACGGGCAAGGTGCCGGACGCGCAGATCCAGGACGCCGTCACGCAGGTCTT CGACCTCCGCCCGGCCGCGATCGTGCGGGACCTCGACCTGCTGCGCCCGATCTACGCGCAGACGGCCGCCTACGGGCACT TCGGCCGCCCGGAGCTGGACTTCACCTGGGAGGCGACCTCCCGCGCCGACGCCCTAACAGCCGCCGTCAAGGGCTGA
Upstream 100 bases:
>100_bases GACGCGCTGCACGACCGGAAGCCGGCCGGTGCGCGTACCCCTGAGTGAACCTCGGTAAACTCCGTCGGTATCAGTCCTGA TCTCCCCAGGGGGTAGTCCA
Downstream 100 bases:
>100_bases CGCCACCTGATCCGCCCGCAGGGGCGGAGCCGACCCCCATCGGGGACGGCTCCGCCCCTGCGCATTTTTGGACGGTTTGT TTGCGGTGATCTGCTTTCCG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase 2; MAT 2; Methionine adenosyltransferase 2 [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTKTYVDIASVVRERILEIGYDS SKKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTEDDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRL SAVRKDGQVGYLRPDGKTQVTIEYEDGKPVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEPELALLEISTEGRRLLVNP TGRFEIGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAH PVGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDLLRPIYAQTAAYGHFGRPELDFTWEATSRADALTAAVKG
Sequences:
>Translated_398_residues MATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTKTYVDIASVVRERILEIGYDS SKKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTEDDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRL SAVRKDGQVGYLRPDGKTQVTIEYEDGKPVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEPELALLEISTEGRRLLVNP TGRFEIGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAH PVGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDLLRPIYAQTAAYGHFGRPELDFTWEATSRADALTAAVKG >Mature_397_residues ATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTKTYVDIASVVRERILEIGYDSS KKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTEDDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRLS AVRKDGQVGYLRPDGKTQVTIEYEDGKPVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEPELALLEISTEGRRLLVNPT GRFEIGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAHP VGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDLLRPIYAQTAAYGHFGRPELDFTWEATSRADALTAAVKG
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=393, Percent_Identity=53.4351145038168, Blast_Score=374, Evalue=1e-103, Organism=Homo sapiens, GI4557737, Length=387, Percent_Identity=54.7803617571059, Blast_Score=372, Evalue=1e-103, Organism=Escherichia coli, GI1789311, Length=392, Percent_Identity=60.2040816326531, Blast_Score=461, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17538494, Length=384, Percent_Identity=53.6458333333333, Blast_Score=376, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17538498, Length=384, Percent_Identity=53.6458333333333, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25145633, Length=388, Percent_Identity=52.319587628866, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17551082, Length=404, Percent_Identity=50.4950495049505, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565905, Length=386, Percent_Identity=48.1865284974093, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI32565911, Length=338, Percent_Identity=52.3668639053254, Blast_Score=312, Evalue=2e-85, Organism=Caenorhabditis elegans, GI25145635, Length=343, Percent_Identity=50.7288629737609, Blast_Score=307, Evalue=7e-84, Organism=Caenorhabditis elegans, GI32565903, Length=314, Percent_Identity=51.9108280254777, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=54.2168674698795, Blast_Score=98, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6323209, Length=389, Percent_Identity=56.0411311053985, Blast_Score=395, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6320710, Length=393, Percent_Identity=55.2162849872774, Blast_Score=394, Evalue=1e-111, Organism=Drosophila melanogaster, GI45552159, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580529, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580537, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580533, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580535, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580531, Length=396, Percent_Identity=51.010101010101, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580527, Length=396, Percent_Identity=51.010101010101, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580525, Length=396, Percent_Identity=51.010101010101, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580541, Length=381, Percent_Identity=49.6062992125984, Blast_Score=338, Evalue=4e-93, Organism=Drosophila melanogaster, GI24580539, Length=130, Percent_Identity=53.0769230769231, Blast_Score=128, Evalue=6e-30,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 42491; Mature: 42360
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTK CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCEEEEEECCCHH TYVDIASVVRERILEIGYDSSKKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCHHHHHHCCCCCC DDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRLSAVRKDGQVGYLRPDGKTQV HHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE TIEYEDGKPVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEPELALLEISTEGRRLLVNP EEEECCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCEEEECC TGRFEIGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVV CCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGLASRCEVQVAYAIGKAHPVGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDL HHHHHHHCEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LRPIYAQTAAYGHFGRPELDFTWEATSRADALTAAVKG HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCC >Mature Secondary Structure ATRLFTSESVTEGHPDKIADQVSDSILDAMLKDDPKSRVAVETMITTGQVHVAGEVTTK CCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCEEEEEECCCHH TYVDIASVVRERILEIGYDSSKKGFDGASCGVSVSIGSQSPDIAQGVDTAHEARVEGSTE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCHHHHHHCCCCCC DDLDRQGAGDQGLMFGFACDETPELMPLPIALAHRLARRLSAVRKDGQVGYLRPDGKTQV HHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEE TIEYEDGKPVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEPELALLEISTEGRRLLVNP EEEECCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCCEEEECC TGRFEIGGPMGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVV CCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AAGLASRCEVQVAYAIGKAHPVGLFVETFGTGKVPDAQIQDAVTQVFDLRPAAIVRDLDL HHHHHHHCEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH LRPIYAQTAAYGHFGRPELDFTWEATSRADALTAAVKG HHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA