| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is coaBC [H]
Identifier: 158313551
GI number: 158313551
Start: 2049351
End: 2050625
Strand: Direct
Name: coaBC [H]
Synonym: Franean1_1715
Alternate gene names: 158313551
Gene position: 2049351-2050625 (Clockwise)
Preceding gene: 158313550
Following gene: 158313552
Centisome position: 22.82
GC content: 74.82
Gene sequence:
>1275_bases ATGCGCGGCGGTGGTTCGGCCGGGGCGGCGCGGCGGCCGCGGGTCGTGCTCGGCGTGTCCGGCGGCATCGCCTCGTACAA GGCCGTCGAGGTGCTGCGCCAGCTGACCGAGTCCGGCCACGACGTCCGCGTCGTGCCGACGGCCGCGGCGCTGCGTTTCG TCGGCGAGGTCACCTGGGCGGCGCTGTCCGGCCAGCCGGTGGTGACCGACCTGTTCACCGACGCCGAGGACGTGGCGCAC GTCCGGGTCGGGCGCGAGGCCGACCTGGTGCTGATCGTGCCCGCCACCGCGGACCTGATGGCGCGGGCCGCGGCGGGCCG GGCGGACGACCTGCTCACCGGCACGTTGCTCACAGCCACCTGCCCGGTGCTGTTCGCCCCAGCCATGCACACCGAGATGT GGCAGCACCCAGCGACCCGCGCCAACGTCGCCCTGCTTCGCGAGCGGGGCGCCCTCGTGCTGGAACCGGCCGTCGGCCGG CTGACCGGCGCCGACTCCGGGCCGGGCCGGCTGCCGGAACCCATCGAGATCGCCTCGGTCGCCCGGGCGGTTCTCGCCCG CGGGCGTGACGGCATGCGGCCCGACCTCGCCGGCCGCCACGTGCTCGTCAGCGCCGGTGGCACCCGCGAGTACCTCGATC CGGTGCGGTTTCTCGGTAACGCCTCCAGCGGCCGGCAGGGATACGCGCTGGCCCGCGCGGCGGTGGCCCGCGGCGCGGCG GTCACCGTCGTGGCCGCCAACGTCGCCCTGCCCGACGTGGCCGGCGCGACCACGGTGCCGGTGGGCTCGGCCGAACAGCT GCGGGCGGCCGTGCACGACGCGGCCCCCCGCGCCGACGTCGTGGTCATGGCAGCGGCGGTGGCCGATTTCCGGCCCGCCA CCGAGCACAAGTACAAGATCAAGAAAGAGTCCGCGGCGCCGGACGCGATCGAGCTGATCCGCAACCCGGACGTCCTGGCC GAGCTTGTCGCGAACCGCCGTCCCGGGCAGGTGTTGGTCGGGTTCGCGGCGGAGACGGGCGGACCCGACGCCGGGGTCCT CGACCTCGCCCGGGCGAAGCTCGCCCGCAAGCCGGTGGACCTGCTGGTGGTGAACCGGGTCGGGTCCGGCCTGGGGTTTG AGGTGGAGCAGAACAGCGCCGTCCTCCTTGACCGTGCGGGCGGGGCCGCGGAGATCGCCCTGACCAGTAAGGATCTTCTT GCCCACCAGGTGCTCGACCGGATCGTCGACGCGCTGCACGACCGGAAGCCGGCCGGTGCGCGTACCCCTGAGTGA
Upstream 100 bases:
>100_bases CTGCCGCCGATCTCCTGACCCACGCGGCCTCCGCGGCTCGCGTCCGTCTCGCCGGTCCTGCCCGCCTCGGTTGTTCCGCG TGACAGGCGGCGGGGCGGGG
Downstream 100 bases:
>100_bases ACCTCGGTAAACTCCGTCGGTATCAGTCCTGATCTCCCCAGGGGGTAGTCCAGTGGCGACGCGCCTTTTCACGTCCGAGT CCGTCACGGAAGGACACCCG
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MRGGGSAGAARRPRVVLGVSGGIASYKAVEVLRQLTESGHDVRVVPTAAALRFVGEVTWAALSGQPVVTDLFTDAEDVAH VRVGREADLVLIVPATADLMARAAAGRADDLLTGTLLTATCPVLFAPAMHTEMWQHPATRANVALLRERGALVLEPAVGR LTGADSGPGRLPEPIEIASVARAVLARGRDGMRPDLAGRHVLVSAGGTREYLDPVRFLGNASSGRQGYALARAAVARGAA VTVVAANVALPDVAGATTVPVGSAEQLRAAVHDAAPRADVVVMAAAVADFRPATEHKYKIKKESAAPDAIELIRNPDVLA ELVANRRPGQVLVGFAAETGGPDAGVLDLARAKLARKPVDLLVVNRVGSGLGFEVEQNSAVLLDRAGGAAEIALTSKDLL AHQVLDRIVDALHDRKPAGARTPE
Sequences:
>Translated_424_residues MRGGGSAGAARRPRVVLGVSGGIASYKAVEVLRQLTESGHDVRVVPTAAALRFVGEVTWAALSGQPVVTDLFTDAEDVAH VRVGREADLVLIVPATADLMARAAAGRADDLLTGTLLTATCPVLFAPAMHTEMWQHPATRANVALLRERGALVLEPAVGR LTGADSGPGRLPEPIEIASVARAVLARGRDGMRPDLAGRHVLVSAGGTREYLDPVRFLGNASSGRQGYALARAAVARGAA VTVVAANVALPDVAGATTVPVGSAEQLRAAVHDAAPRADVVVMAAAVADFRPATEHKYKIKKESAAPDAIELIRNPDVLA ELVANRRPGQVLVGFAAETGGPDAGVLDLARAKLARKPVDLLVVNRVGSGLGFEVEQNSAVLLDRAGGAAEIALTSKDLL AHQVLDRIVDALHDRKPAGARTPE >Mature_424_residues MRGGGSAGAARRPRVVLGVSGGIASYKAVEVLRQLTESGHDVRVVPTAAALRFVGEVTWAALSGQPVVTDLFTDAEDVAH VRVGREADLVLIVPATADLMARAAAGRADDLLTGTLLTATCPVLFAPAMHTEMWQHPATRANVALLRERGALVLEPAVGR LTGADSGPGRLPEPIEIASVARAVLARGRDGMRPDLAGRHVLVSAGGTREYLDPVRFLGNASSGRQGYALARAAVARGAA VTVVAANVALPDVAGATTVPVGSAEQLRAAVHDAAPRADVVVMAAAVADFRPATEHKYKIKKESAAPDAIELIRNPDVLA ELVANRRPGQVLVGFAAETGGPDAGVLDLARAKLARKPVDLLVVNRVGSGLGFEVEQNSAVLLDRAGGAAEIALTSKDLL AHQVLDRIVDALHDRKPAGARTPE
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=190, Percent_Identity=30.5263157894737, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI87082301, Length=401, Percent_Identity=40.1496259351621, Blast_Score=238, Evalue=4e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43894; Mature: 43894
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGGSAGAARRPRVVLGVSGGIASYKAVEVLRQLTESGHDVRVVPTAAALRFVGEVTWA CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH ALSGQPVVTDLFTDAEDVAHVRVGREADLVLIVPATADLMARAAAGRADDLLTGTLLTAT EECCCCEEHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH CPVLFAPAMHTEMWQHPATRANVALLRERGALVLEPAVGRLTGADSGPGRLPEPIEIASV HHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH ARAVLARGRDGMRPDLAGRHVLVSAGGTREYLDPVRFLGNASSGRQGYALARAAVARGAA HHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCE VTVVAANVALPDVAGATTVPVGSAEQLRAAVHDAAPRADVVVMAAAVADFRPATEHKYKI EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEE KKESAAPDAIELIRNPDVLAELVANRRPGQVLVGFAAETGGPDAGVLDLARAKLARKPVD CCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCE LLVVNRVGSGLGFEVEQNSAVLLDRAGGAAEIALTSKDLLAHQVLDRIVDALHDRKPAGA EEEEECCCCCCCEEECCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC RTPE CCCC >Mature Secondary Structure MRGGGSAGAARRPRVVLGVSGGIASYKAVEVLRQLTESGHDVRVVPTAAALRFVGEVTWA CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH ALSGQPVVTDLFTDAEDVAHVRVGREADLVLIVPATADLMARAAAGRADDLLTGTLLTAT EECCCCEEHHHHCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH CPVLFAPAMHTEMWQHPATRANVALLRERGALVLEPAVGRLTGADSGPGRLPEPIEIASV HHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH ARAVLARGRDGMRPDLAGRHVLVSAGGTREYLDPVRFLGNASSGRQGYALARAAVARGAA HHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCE VTVVAANVALPDVAGATTVPVGSAEQLRAAVHDAAPRADVVVMAAAVADFRPATEHKYKI EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEE KKESAAPDAIELIRNPDVLAELVANRRPGQVLVGFAAETGGPDAGVLDLARAKLARKPVD CCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCE LLVVNRVGSGLGFEVEQNSAVLLDRAGGAAEIALTSKDLLAHQVLDRIVDALHDRKPAGA EEEEECCCCCCCEEECCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC RTPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]