| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is aroK [H]
Identifier: 158313536
GI number: 158313536
Start: 2032769
End: 2033332
Strand: Direct
Name: aroK [H]
Synonym: Franean1_1700
Alternate gene names: 158313536
Gene position: 2032769-2033332 (Clockwise)
Preceding gene: 158313535
Following gene: 158313537
Centisome position: 22.63
GC content: 75.89
Gene sequence:
>564_bases ATGCGCGCGGAGAGCGGGGCGCGGGCCGACGGGCCGGGGGCAGCTGTGTCCGGCCCGGTCGCCGTGCTGGTCGGCGCGCC GGGGGCGGGTAAGAGCACCGTCGGTATAGCGGTCGCGGCGCGCCTCGGGGTGGCCTTCCGTGACACCGACGCCGATGTCG AGTCGAACCTCGGAATGAGCGTCTCGGACGTGTTCCTGGAGCACGGCGAGGAGTACTTCCGCGCGGCGGAGCGGGCGGCG GTGCTGACCGCCCTGGCCGAGCACCCGGGTGTGCTCGCCCTGGGCGGCGGGGCCGTGCTGGACGCCGGCGTCCGCGCCGA GCTGGCCCGGCACTGGGTCGTCTACCTTGACGTGACCGCGTCTGACGCGGCGAAGCGGGTCGGGCTCGCGCGCGACCGGC CGCTGCTCGTGGAGGGCCCGCGGACCCGGCTGGCCGCGCTGCTGAAGGCCCGCCGTCCGCTGTACGAGGAGGTGGCCGCG ATCACCGTGGACACCGCCGCCCTCGGGATCGACGACGTCGTCGCCGCGATCCTGATCGAGCTCGCCGGGAGGGCGGGGCA CTGA
Upstream 100 bases:
>100_bases TGCTCGCCGGCGCAGCGCTGGAGAAGTTCGGCGGCGACTCGGTGGAGGAGACCCGGCGCAACTACGAGGGCTACCTGAAG TCGCTGGCGGTGCGCTGACC
Downstream 100 bases:
>100_bases TGTGCGCGATGAAGGTTTCCGACATGGTCCGCATCCAGGTCACCCCGTCCGGTGACCGGGCCTACGACGTGGTGCTGGGC GAGGGCGCCCTCTGCGAGCT
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRAESGARADGPGAAVSGPVAVLVGAPGAGKSTVGIAVAARLGVAFRDTDADVESNLGMSVSDVFLEHGEEYFRAAERAA VLTALAEHPGVLALGGGAVLDAGVRAELARHWVVYLDVTASDAAKRVGLARDRPLLVEGPRTRLAALLKARRPLYEEVAA ITVDTAALGIDDVVAAILIELAGRAGH
Sequences:
>Translated_187_residues MRAESGARADGPGAAVSGPVAVLVGAPGAGKSTVGIAVAARLGVAFRDTDADVESNLGMSVSDVFLEHGEEYFRAAERAA VLTALAEHPGVLALGGGAVLDAGVRAELARHWVVYLDVTASDAAKRVGLARDRPLLVEGPRTRLAALLKARRPLYEEVAA ITVDTAALGIDDVVAAILIELAGRAGH >Mature_187_residues MRAESGARADGPGAAVSGPVAVLVGAPGAGKSTVGIAVAARLGVAFRDTDADVESNLGMSVSDVFLEHGEEYFRAAERAA VLTALAEHPGVLALGGGAVLDAGVRAELARHWVVYLDVTASDAAKRVGLARDRPLLVEGPRTRLAALLKARRPLYEEVAA ITVDTAALGIDDVVAAILIELAGRAGH
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=137, Percent_Identity=33.5766423357664, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI87082255, Length=147, Percent_Identity=45.578231292517, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786587, Length=154, Percent_Identity=37.6623376623377, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 19064; Mature: 19064
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAESGARADGPGAAVSGPVAVLVGAPGAGKSTVGIAVAARLGVAFRDTDADVESNLGMS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCEEEECCCCCHHHCCCCH VSDVFLEHGEEYFRAAERAAVLTALAEHPGVLALGGGAVLDAGVRAELARHWVVYLDVTA HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEEC SDAAKRVGLARDRPLLVEGPRTRLAALLKARRPLYEEVAAITVDTAALGIDDVVAAILIE HHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH LAGRAGH HHCCCCC >Mature Secondary Structure MRAESGARADGPGAAVSGPVAVLVGAPGAGKSTVGIAVAARLGVAFRDTDADVESNLGMS CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCEEEECCCCCHHHCCCCH VSDVFLEHGEEYFRAAERAAVLTALAEHPGVLALGGGAVLDAGVRAELARHWVVYLDVTA HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEEEEEEC SDAAKRVGLARDRPLLVEGPRTRLAALLKARRPLYEEVAAITVDTAALGIDDVVAAILIE HHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHH LAGRAGH HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA