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The map label for this gene is yqgF [C]

Identifier: 158313531

GI number: 158313531

Start: 2027936

End: 2028502

Strand: Direct

Name: yqgF [C]

Synonym: Franean1_1695

Alternate gene names: 158313531

Gene position: 2027936-2028502 (Clockwise)

Preceding gene: 158313530

Following gene: 158313532

Centisome position: 22.58

GC content: 72.84

Gene sequence:

>567_bases
GTGACCGCTCCGGATTCCGCGGCTGGCGCGGATTCCGCGGCCGGTTCGGATTCTGCGGCCGGCGGGCAGGCGGACGCGGG
GCGCGGCGTGCGGATCGGGGTGGATGTCGGGTCGGTGCGGGTCGGTGTGGCGGTGAGCGATCCTGACGGTCTGCTCGCCG
TGCCGGTGACAACTCTGCGCCGAGATGTGTCTCGCCGTGGCTTTGCGGACGTCGACGAGCTTGCCGACATCGTTCGGGAC
AGGCACGCTGTCGAAGTTGTCGTCGGTCTGCCGCGTCACCTCTCCGGCCGGGAGGGCGAGGCCGTCCGGCTCGCGCGGCG
GTACGCGGAGGTGCTGTCCGCGCGTGTCGCGCCCGTGCCGGTCCGTCTCGTCGACGAGCGGCTGACCACGGTCGTGGCGC
ATCGCAGAATGGCTGAGCGCGGACTGCGTTCCCGGGCCCGCCGTGATCTCGTGGATCAGGAGGCAGCAGTGCAGATCCTG
CAGCACCACCTGGACGTCCGCCGGGCACGCGGGGGATCCGGCGGCGCCGCCTCGGGCGGCACTGGGCGGCCCCTGGATTC
GGCGTGA

Upstream 100 bases:

>100_bases
AGAGCGCGTGAACGACACCGGTGTGGGCCGGGGGGACACCGGCGGCGCGGCCGCGGCGTCGCCCTGGCCCGGCCCGGACC
CCGTGACCGCTCCGGACCCC

Downstream 100 bases:

>100_bases
TTCGGGACGGGGACGGATTCGACGAGCTGCTCGACGGCGCGGGCTACGACGACTACGACGACCGGGACTACAACGACCGG
GCGTATGAGGAGCAACGCCG

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTAPDSAAGADSAAGSDSAAGGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLRRDVSRRGFADVDELADIVRD
RHAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVPVRLVDERLTTVVAHRRMAERGLRSRARRDLVDQEAAVQIL
QHHLDVRRARGGSGGAASGGTGRPLDSA

Sequences:

>Translated_188_residues
MTAPDSAAGADSAAGSDSAAGGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLRRDVSRRGFADVDELADIVRD
RHAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVPVRLVDERLTTVVAHRRMAERGLRSRARRDLVDQEAAVQIL
QHHLDVRRARGGSGGAASGGTGRPLDSA
>Mature_187_residues
TAPDSAAGADSAAGSDSAAGGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLRRDVSRRGFADVDELADIVRDR
HAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVPVRLVDERLTTVVAHRRMAERGLRSRARRDLVDQEAAVQILQ
HHLDVRRARGGSGGAASGGTGRPLDSA

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 19600; Mature: 19469

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPDSAAGADSAAGSDSAAGGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEECCHHHHH
RDVSRRGFADVDELADIVRDRHAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVP
HHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
VRLVDERLTTVVAHRRMAERGLRSRARRDLVDQEAAVQILQHHLDVRRARGGSGGAASGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TGRPLDSA
CCCCCCCC
>Mature Secondary Structure 
TAPDSAAGADSAAGSDSAAGGQADAGRGVRIGVDVGSVRVGVAVSDPDGLLAVPVTTLR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEECCHHHHH
RDVSRRGFADVDELADIVRDRHAVEVVVGLPRHLSGREGEAVRLARRYAEVLSARVAPVP
HHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH
VRLVDERLTTVVAHRRMAERGLRSRARRDLVDQEAAVQILQHHLDVRRARGGSGGAASGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TGRPLDSA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA