Click here to switch to the map view.

The map label for this gene is ycjS [H]

Identifier: 158313496

GI number: 158313496

Start: 1984909

End: 1986003

Strand: Direct

Name: ycjS [H]

Synonym: Franean1_1660

Alternate gene names: 158313496

Gene position: 1984909-1986003 (Clockwise)

Preceding gene: 158313495

Following gene: 158313497

Centisome position: 22.1

GC content: 75.71

Gene sequence:

>1095_bases
GTGCGCGTCGCCGTGGTCGGGCTCGGCTGGGCCGGGCGGTCGATCTGGCTGCCCCGCCTGCGCGAGCACGCCGCGTACGA
CGTGGTCGCACTGGTCGACCCCGACGCGGCGGCCCGGGCCGAGCTGGCCGCGGCGCTGGACGGCCAGGCACCGGTCGGGC
TGTTCGATGACCCCGACGCGCTGCGGCGGACCGAGGTGGACCTCGCCGTCGTGGCGGTCCCCAACCACCTGCACAGCTTT
GTAGCCGCACGGTTGCTAAACGTCGGGGTTCCGGTCTTCCTGGAGAAGCCCGTCTGCCTCAGCACCGCCGAGGCCGACAC
CCTGGCCGCCGCCGAGCTGGCCGGCGGGGCGATGCTGCTGGCCGGCAGCGCGTCCCGCTTCCGGGCCGACACCCGCGCGC
TCTACGACCTCGCCGGGCGGCTCGGTGAGATCCGGCACGTGGACGTCTCGTGGGTGCGCGCCCGCGGTGTTCCCGACGCC
GGCGGCTGGTTCACCCAGCGCAGCCTCGCCGGGGGCGGGGCGCTGGTCGACCTCGGCTGGCACCTGCTCGACGCGGTCGC
GCCGTTCGTGGGCACGGACGGCTTCGCCCAGGCCATCGGGACCGTCTCCAGCGACTTCGTCGCCAACGCCGCCTGGGGTG
CGGCCTGGCGGCACGAGGACGCCGCGCAGTCCCGGGCCGGAGGCGACGTTGAGGACACGGTCCGCGCGTTCCTCGTCGCG
GGCAGTGGCGTGTCGGTGTCGCTGCGCGCGAGCTGGGCGTCGCACCAGGCGCTCGACGCGACGGTGATCCGGGTCGAGGG
CAGCGCCGGCACGGCCGAGCTGCGCTGCACCTTCGGCTTCAGCCCGAACCGGCATCCCGCGTCCACGCTGACCTGGACGA
AGGACGGCGTGGACAGCGCCGTCGATGTCGTCACCGAGCCGATCGGCGCCGAGTACCGCCGCCAGCTCGACGAGCTCCCG
GCGCTGCTCGCCGACGCCGGGCAGCGCGGCCGGGCCGTCGCCCAGGCCCGGTCGACGATCGCCGCCATCGAGCGGGTCTA
CGACTCCGCGCGACCGCGGAACCACGCCATCCCGGCCGCCCGGGCCGCGTTCTGA

Upstream 100 bases:

>100_bases
GGCGTCGGAGGCTCTGGCCTCCGCTGAGGCCCTGGCGGCGCCGGTGGCCCCGCCGTCCGTCGCGTCCTCGGTGACCGTGG
TCTCCGCGGCCCCGGGCCGG

Downstream 100 bases:

>100_bases
CGCCGCGAGCACCCACCGCCGACCGCAACGCCGAGCCTTGGGGGGGAACCGATGGGCACCCACGCGATCGTTTTCGACCT
TGACGGTGTGATCGTCGACA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRVAVVGLGWAGRSIWLPRLREHAAYDVVALVDPDAAARAELAAALDGQAPVGLFDDPDALRRTEVDLAVVAVPNHLHSF
VAARLLNVGVPVFLEKPVCLSTAEADTLAAAELAGGAMLLAGSASRFRADTRALYDLAGRLGEIRHVDVSWVRARGVPDA
GGWFTQRSLAGGGALVDLGWHLLDAVAPFVGTDGFAQAIGTVSSDFVANAAWGAAWRHEDAAQSRAGGDVEDTVRAFLVA
GSGVSVSLRASWASHQALDATVIRVEGSAGTAELRCTFGFSPNRHPASTLTWTKDGVDSAVDVVTEPIGAEYRRQLDELP
ALLADAGQRGRAVAQARSTIAAIERVYDSARPRNHAIPAARAAF

Sequences:

>Translated_364_residues
MRVAVVGLGWAGRSIWLPRLREHAAYDVVALVDPDAAARAELAAALDGQAPVGLFDDPDALRRTEVDLAVVAVPNHLHSF
VAARLLNVGVPVFLEKPVCLSTAEADTLAAAELAGGAMLLAGSASRFRADTRALYDLAGRLGEIRHVDVSWVRARGVPDA
GGWFTQRSLAGGGALVDLGWHLLDAVAPFVGTDGFAQAIGTVSSDFVANAAWGAAWRHEDAAQSRAGGDVEDTVRAFLVA
GSGVSVSLRASWASHQALDATVIRVEGSAGTAELRCTFGFSPNRHPASTLTWTKDGVDSAVDVVTEPIGAEYRRQLDELP
ALLADAGQRGRAVAQARSTIAAIERVYDSARPRNHAIPAARAAF
>Mature_364_residues
MRVAVVGLGWAGRSIWLPRLREHAAYDVVALVDPDAAARAELAAALDGQAPVGLFDDPDALRRTEVDLAVVAVPNHLHSF
VAARLLNVGVPVFLEKPVCLSTAEADTLAAAELAGGAMLLAGSASRFRADTRALYDLAGRLGEIRHVDVSWVRARGVPDA
GGWFTQRSLAGGGALVDLGWHLLDAVAPFVGTDGFAQAIGTVSSDFVANAAWGAAWRHEDAAQSRAGGDVEDTVRAFLVA
GSGVSVSLRASWASHQALDATVIRVEGSAGTAELRCTFGFSPNRHPASTLTWTKDGVDSAVDVVTEPIGAEYRRQLDELP
ALLADAGQRGRAVAQARSTIAAIERVYDSARPRNHAIPAARAAF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=196, Percent_Identity=31.6326530612245, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38175; Mature: 38175

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVVGLGWAGRSIWLPRLREHAAYDVVALVDPDAAARAELAAALDGQAPVGLFDDPDA
CEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHH
LRRTEVDLAVVAVPNHLHSFVAARLLNVGVPVFLEKPVCLSTAEADTLAAAELAGGAMLL
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHCCCEEEE
AGSASRFRADTRALYDLAGRLGEIRHVDVSWVRARGVPDAGGWFTQRSLAGGGALVDLGW
ECCCHHHHHHHHHHHHHHHHHCCEEEECHHHHEECCCCCCCCCHHHHHCCCCCHHHHHHH
HLLDAVAPFVGTDGFAQAIGTVSSDFVANAAWGAAWRHEDAAQSRAGGDVEDTVRAFLVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCHHHHHHHHEEE
GSGVSVSLRASWASHQALDATVIRVEGSAGTAELRCTFGFSPNRHPASTLTWTKDGVDSA
CCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHH
VDVVTEPIGAEYRRQLDELPALLADAGQRGRAVAQARSTIAAIERVYDSARPRNHAIPAA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
RAAF
HHCC
>Mature Secondary Structure
MRVAVVGLGWAGRSIWLPRLREHAAYDVVALVDPDAAARAELAAALDGQAPVGLFDDPDA
CEEEEEEECCCCCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHH
LRRTEVDLAVVAVPNHLHSFVAARLLNVGVPVFLEKPVCLSTAEADTLAAAELAGGAMLL
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHCCCEEEE
AGSASRFRADTRALYDLAGRLGEIRHVDVSWVRARGVPDAGGWFTQRSLAGGGALVDLGW
ECCCHHHHHHHHHHHHHHHHHCCEEEECHHHHEECCCCCCCCCHHHHHCCCCCHHHHHHH
HLLDAVAPFVGTDGFAQAIGTVSSDFVANAAWGAAWRHEDAAQSRAGGDVEDTVRAFLVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCHHHHHHHHEEE
GSGVSVSLRASWASHQALDATVIRVEGSAGTAELRCTFGFSPNRHPASTLTWTKDGVDSA
CCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHH
VDVVTEPIGAEYRRQLDELPALLADAGQRGRAVAQARSTIAAIERVYDSARPRNHAIPAA
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
RAAF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]