| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ppaX [H]
Identifier: 158313497
GI number: 158313497
Start: 1986055
End: 1986699
Strand: Direct
Name: ppaX [H]
Synonym: Franean1_1661
Alternate gene names: 158313497
Gene position: 1986055-1986699 (Clockwise)
Preceding gene: 158313496
Following gene: 158313501
Centisome position: 22.11
GC content: 71.16
Gene sequence:
>645_bases ATGGGCACCCACGCGATCGTTTTCGACCTTGACGGTGTGATCGTCGACAGCCACGCCGTCATGCGCGAGGCGTTCATGAT CGCCTATGCCGAGGTGGTCGGGCCAGGCCCCGCGCCGTTCGAGGAGTACAACCGCCACCTCGGACGGTACTTCCCGGACA TCATGCGGATCATGGGCCTGCCGCTCGAGATGGAGGAGCCCTTCGTCCGGGAGAGCTACCGGCTCTCCCGCAAGGTCCTG CTTTTCGAGGGCGTCCGGGAGCTGCTCGGCGACCTGCGCGAGCGCGGCCTGCGGCTCGCGGTGGCGACGGGCAAGAGCGG CCCGCGGGCCCGCGCGCTGCTCACCGAGCTGGAGATCGTTGACTACTTCGAACGGGTTATCGGCTCCGACGAGGTGGCCC ACCCCAAGCCGGCCCCGGACATCGTCCTGCTCGCCCTCGACGTGCTCGGTGCCGCGCCCGGCGAGGCGATGATGATCGGC GACGCGGTGACCGACATCCAGAGCGCCCGCGGCGCCGGGGTGCGGGCGGTCGCCGCGATGTGGGGGGAGACCGACGAGGC CGAGCTGTTGGCGGCCGGCCCCGACTCGGTGCTGCGCTCCCCGCGTGAGCTCCTCGGCCTGCTCGGTGACCACCGCGCGG TGTGA
Upstream 100 bases:
>100_bases CGCGCGACCGCGGAACCACGCCATCCCGGCCGCCCGGGCCGCGTTCTGACGCCGCGAGCACCCACCGCCGACCGCAACGC CGAGCCTTGGGGGGGAACCG
Downstream 100 bases:
>100_bases ACGCTGCGCCGTGAGAACGGCGCGGTGTGTGGATGGCCGTCGGCGGGGCCCGGGTTTTCGCGTCGGGCCCCGCCGGTCCC CGGCCGGCTCACCCCGTCCG
Product: AHBA synthesis associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MGTHAIVFDLDGVIVDSHAVMREAFMIAYAEVVGPGPAPFEEYNRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLSRKVL LFEGVRELLGDLRERGLRLAVATGKSGPRARALLTELEIVDYFERVIGSDEVAHPKPAPDIVLLALDVLGAAPGEAMMIG DAVTDIQSARGAGVRAVAAMWGETDEAELLAAGPDSVLRSPRELLGLLGDHRAV
Sequences:
>Translated_214_residues MGTHAIVFDLDGVIVDSHAVMREAFMIAYAEVVGPGPAPFEEYNRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLSRKVL LFEGVRELLGDLRERGLRLAVATGKSGPRARALLTELEIVDYFERVIGSDEVAHPKPAPDIVLLALDVLGAAPGEAMMIG DAVTDIQSARGAGVRAVAAMWGETDEAELLAAGPDSVLRSPRELLGLLGDHRAV >Mature_213_residues GTHAIVFDLDGVIVDSHAVMREAFMIAYAEVVGPGPAPFEEYNRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLSRKVLL FEGVRELLGDLRERGLRLAVATGKSGPRARALLTELEIVDYFERVIGSDEVAHPKPAPDIVLLALDVLGAAPGEAMMIGD AVTDIQSARGAGVRAVAAMWGETDEAELLAAGPDSVLRSPRELLGLLGDHRAV
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=231, Percent_Identity=31.6017316017316, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789046, Length=184, Percent_Identity=31.5217391304348, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 23272; Mature: 23141
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTHAIVFDLDGVIVDSHAVMREAFMIAYAEVVGPGPAPFEEYNRHLGRYFPDIMRIMGL CCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PLEMEEPFVRESYRLSRKVLLFEGVRELLGDLRERGLRLAVATGKSGPRARALLTELEIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHH DYFERVIGSDEVAHPKPAPDIVLLALDVLGAAPGEAMMIGDAVTDIQSARGAGVRAVAAM HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHH WGETDEAELLAAGPDSVLRSPRELLGLLGDHRAV HCCCCCCCEEECCCHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure GTHAIVFDLDGVIVDSHAVMREAFMIAYAEVVGPGPAPFEEYNRHLGRYFPDIMRIMGL CCEEEEEECCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PLEMEEPFVRESYRLSRKVLLFEGVRELLGDLRERGLRLAVATGKSGPRARALLTELEIV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHH DYFERVIGSDEVAHPKPAPDIVLLALDVLGAAPGEAMMIGDAVTDIQSARGAGVRAVAAM HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHH WGETDEAELLAAGPDSVLRSPRELLGLLGDHRAV HCCCCCCCEEECCCHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]