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The map label for this gene is yobV [H]

Identifier: 158313483

GI number: 158313483

Start: 1967102

End: 1968202

Strand: Direct

Name: yobV [H]

Synonym: Franean1_1647

Alternate gene names: 158313483

Gene position: 1967102-1968202 (Clockwise)

Preceding gene: 158313478

Following gene: 158313484

Centisome position: 21.9

GC content: 76.2

Gene sequence:

>1101_bases
GTGCGTGCCAGCCGGCTCCTCTCCGTCCTCCTGCTGCTGCAGACCCGCGGCCGGCTGACGGCCCGCGAGATAGCCGCCGA
GCTGGAGGTGTCGGTCCGCACGGTCTACCGGGACCTGGACGCGCTCGCCGAGGCCGGCGTCCCGGTGCTGGCGGAGCGTG
GGGCCACCGGCGGTTACGAGCTGCTCGCCGGCTACCGCACCCGGCTGACCGGGCTGACCGCGGACGAGGCCGACTCCCTG
CTGTTCGCCGGGCTCCCGGACGCCGCCGCCGAGCTCGGTTTCGGCGCGGTAGTCGCCGCCGCCGAGCTCAAGCTGCTCGC
CGCGCTCCCGGCCGAGGCCCGTGAGCGGGCACTTCGGGTGCGGGAGCTGTTCCACCTCGACGCGCCCGGCTGGTTCCGTG
CCGCCGAGCCGGTGCCGCTGCTCGCCGAGGTCGCCGGTGCGGTGTGGGGGCGGCGGCGCATCCGGATCACCTACCTGCGC
TGGCGCGCACCGCGCCGGGTCGTCCGCGAGCTGGAGCCGCTCGGTGTGGTCCTCAAGAGCGGCACCTGGTACGTCGTAGC
CGCCGCCTGCCCCGGCGACGGCCGGGCCGACATCGCGGACGCTCCGCCCGCGGAGACACCGGAGACACCGGAGACACCTG
AGGCGGCGGCGGAGGCGTTCGAGGCGTCCGTGCGGGTGTACCGGGTCGCGAAGATTCTCGGTCTCGAGGCGATGCCGGAG
ACGTTCGAACGGCCGGAGCGGTTCGACCTGGCGGCCTATTGGGAGCAGTGGACCGCCAGGTACGAGGCCGGCGTCTACCG
GGGGACCGCCACGGTGCGCCTGTCGCCGGAGGGCCGGCGGATGGTTCCCTTCCGGCTCGCCCCGGCGGTGGCGCGGGCCG
TCGAGCAGACCGCGGGCGATCCCGACGCCGACGGCTGGGTGCGCGCCGAGCTCCCGATCGAGTCGGTCCGGCACGCCCGG
GGCGACCTGCTCCTCCTCGGCCCTGACCTGGAGGTGCTCGATCCCCCGGAGCTGCGGGCGGCGATGGCGGACGCGGCCGC
GGGCCTGGCGGCGCTCTACAGCCCGCCCGCGAACCCGCCCGCGAACCCGCCCGCGTGCTGA

Upstream 100 bases:

>100_bases
GCGTTGGTGCGCTGTCAACACCCATCCTGGCGCCGATAACTGACTTCTCCTGTCAGGTATCGCCGGGAGATGACAGAGGG
AGACGGGGGAGAATTCGGTC

Downstream 100 bases:

>100_bases
GATGACCGGCCCCCGGCCCGGCCCCCGGCCGGGAAGCGCTGGCATGCTGAACGGATAACGCGCGGACCACAGTGGTAGTC
GCGCGAGGAGGAGCGCAGCG

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRASRLLSVLLLLQTRGRLTAREIAAELEVSVRTVYRDLDALAEAGVPVLAERGATGGYELLAGYRTRLTGLTADEADSL
LFAGLPDAAAELGFGAVVAAAELKLLAALPAEARERALRVRELFHLDAPGWFRAAEPVPLLAEVAGAVWGRRRIRITYLR
WRAPRRVVRELEPLGVVLKSGTWYVVAAACPGDGRADIADAPPAETPETPETPEAAAEAFEASVRVYRVAKILGLEAMPE
TFERPERFDLAAYWEQWTARYEAGVYRGTATVRLSPEGRRMVPFRLAPAVARAVEQTAGDPDADGWVRAELPIESVRHAR
GDLLLLGPDLEVLDPPELRAAMADAAAGLAALYSPPANPPANPPAC

Sequences:

>Translated_366_residues
MRASRLLSVLLLLQTRGRLTAREIAAELEVSVRTVYRDLDALAEAGVPVLAERGATGGYELLAGYRTRLTGLTADEADSL
LFAGLPDAAAELGFGAVVAAAELKLLAALPAEARERALRVRELFHLDAPGWFRAAEPVPLLAEVAGAVWGRRRIRITYLR
WRAPRRVVRELEPLGVVLKSGTWYVVAAACPGDGRADIADAPPAETPETPETPEAAAEAFEASVRVYRVAKILGLEAMPE
TFERPERFDLAAYWEQWTARYEAGVYRGTATVRLSPEGRRMVPFRLAPAVARAVEQTAGDPDADGWVRAELPIESVRHAR
GDLLLLGPDLEVLDPPELRAAMADAAAGLAALYSPPANPPANPPAC
>Mature_366_residues
MRASRLLSVLLLLQTRGRLTAREIAAELEVSVRTVYRDLDALAEAGVPVLAERGATGGYELLAGYRTRLTGLTADEADSL
LFAGLPDAAAELGFGAVVAAAELKLLAALPAEARERALRVRELFHLDAPGWFRAAEPVPLLAEVAGAVWGRRRIRITYLR
WRAPRRVVRELEPLGVVLKSGTWYVVAAACPGDGRADIADAPPAETPETPETPEAAAEAFEASVRVYRVAKILGLEAMPE
TFERPERFDLAAYWEQWTARYEAGVYRGTATVRLSPEGRRMVPFRLAPAVARAVEQTAGDPDADGWVRAELPIESVRHAR
GDLLLLGPDLEVLDPPELRAAMADAAAGLAALYSPPANPPANPPAC

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 39475; Mature: 39475

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASRLLSVLLLLQTRGRLTAREIAAELEVSVRTVYRDLDALAEAGVPVLAERGATGGYE
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
LLAGYRTRLTGLTADEADSLLFAGLPDAAAELGFGAVVAAAELKLLAALPAEARERALRV
HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RELFHLDAPGWFRAAEPVPLLAEVAGAVWGRRRIRITYLRWRAPRRVVRELEPLGVVLKS
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHEEEEC
GTWYVVAAACPGDGRADIADAPPAETPETPETPEAAAEAFEASVRVYRVAKILGLEAMPE
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TFERPERFDLAAYWEQWTARYEAGVYRGTATVRLSPEGRRMVPFRLAPAVARAVEQTAGD
HHCCCCHHHHHHHHHHHHHHHHCCEEECEEEEEECCCCCEECCHHHHHHHHHHHHHHCCC
PDADGWVRAELPIESVRHARGDLLLLGPDLEVLDPPELRAAMADAAAGLAALYSPPANPP
CCCCCEEEECCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANPPAC
CCCCCC
>Mature Secondary Structure
MRASRLLSVLLLLQTRGRLTAREIAAELEVSVRTVYRDLDALAEAGVPVLAERGATGGYE
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
LLAGYRTRLTGLTADEADSLLFAGLPDAAAELGFGAVVAAAELKLLAALPAEARERALRV
HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
RELFHLDAPGWFRAAEPVPLLAEVAGAVWGRRRIRITYLRWRAPRRVVRELEPLGVVLKS
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHEEEEC
GTWYVVAAACPGDGRADIADAPPAETPETPETPEAAAEAFEASVRVYRVAKILGLEAMPE
CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TFERPERFDLAAYWEQWTARYEAGVYRGTATVRLSPEGRRMVPFRLAPAVARAVEQTAGD
HHCCCCHHHHHHHHHHHHHHHHCCEEECEEEEEECCCCCEECCHHHHHHHHHHHHHHCCC
PDADGWVRAELPIESVRHARGDLLLLGPDLEVLDPPELRAAMADAAAGLAALYSPPANPP
CCCCCEEEECCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
ANPPAC
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]