| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313478
Identifier: 158313478
GI number: 158313478
Start: 1957924
End: 1959321
Strand: Direct
Name: 158313478
Synonym: Franean1_1642
Alternate gene names: NA
Gene position: 1957924-1959321 (Clockwise)
Preceding gene: 158313477
Following gene: 158313483
Centisome position: 21.8
GC content: 69.74
Gene sequence:
>1398_bases ATGACGGCACAGGAGGGCCAGCAGGCGCTGGAGGCACAGCAGCCGCTGGACGCGCTGGAGGCGCAGTTCGCGCAGTGGCG TCACTACGCGCAGCGCCGCCGGGAGCTGCGGACCGCCGACGCCGACGAGCTCGAGGACCATCTCCGCGGTTCCGTCGACG AGCTCGTCATGGCCGGCCTGAGCGCCGACGAGGCGTTCCTGGTCGCGGTCAAACGGATGGGCAGCCTCGACGAGCTGTCC CGCGAGTTCGCCCGGGAGCATTCGGAACGGCTGTGGAAACAGCTGGTCCTGACCGGCGGCCCGGCCGCGGACACCCGCTC GCGGCGCGACCTGCGGATGCTGGTGCTCTGCGCCGCGGGCGCGGCGGTGTCTGTCAAGGCGCCGGAGCTGTTCGGCGTGC GGATGACCGACGACGGTTCGGCCTCGTTCTACGGGCCGAACCTCAGCCTGTTCGTCCTGCCGTGGCTGGCCGGCTTCCTC GCCTGGCGCCGCCAGGCCCCGCGCCCGCTGGTCGGGATCCTGGCGGCGCTGTTCGCGCTCGGCGCGGTGGCGGCCAACGT CTACCCGCTCGGCGACGATTCGCAGTCGGTGGTCGTCACCAGCATCCACCTGCCGATCGCCCTGTGGCTCGTGGTGGGCC TGGCCTACGCCGCGGACGACTGGCGGTCGTCGCGCAGACGCATGGACTTCATCCGCTTCACCGGCGAATGGTTCGTCTAC TTCGTCCTCATCGCCCTCGGCGGCGGTGTGCTCACCGTGTTCACGGCCGGCACCTTCGAAGCCATCGGAATCGTTTCGGA CGACTTCATCTCGCAGTGGCTCCTTCCCTGTGGAGCGGCAGCCGGGGTCATCGTGGCCGGGTGGCTCGTCGAAGCGAAGC AGAGCGTGGTGGAGAACATCGCCCCGGTGCTCACCAGGCTGTTCACCCCGTTGTTCACCGTGGTCCTGCTGGCCTTCCTC ATCGCCGTCTGCTGCACCGGCACCGGCATCGACGTCGAGCGGGACGCGCTGATCCTGTTCGACCTGCTGCTGGTCGTCGT CCTGGGGCTGCTGCTCTACTCGATGTCAGCCCGCGATCCGCTGGCCCCGCCCGACCTGTTCGACCGGCTGCAGCTCGCCC TGGTGGTGAGCGCGCTGGCCATCGACGTGCTGGTCCTGCTGGCGGTCACCGGGCGCATCACCGAGTACGGCACCACGCCC AACAAGGCCGCGGCGCTCGGGGAGAACGCCATCCTGCTGGCGAACCTCGCCTGGTCGGCGTGGCTCCTGCTGAAGCTGGT CCGCCGGCACACGCCATTCGCGGCGCTCGAACGCTGGCAGACCTCTTACCTGCCGGTGTACGCCGTCTGGGCCTGGATCG TGGTCCTCGCCTTTCCTCCGTTGTTCGGCTATGCCTGA
Upstream 100 bases:
>100_bases CGGTCGTGGACGCGCTCAAGGAGATCTGGACGGGCCTCGGCGACCGCGGCCCGCTGACGGCCATCCCAGCCATCCCGGCG ATCCCAGTGGAGGGCCACGC
Downstream 100 bases:
>100_bases CCGAGGCATCGCCGGGCCCGCCGTCGAAGGCGGAACAAGGGAAGGCGGAACAAGGGAAGGCGGGGAGAGGGCGGGGTGCG CCCCGCGCGGCCGGGTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTAQEGQQALEAQQPLDALEAQFAQWRHYAQRRRELRTADADELEDHLRGSVDELVMAGLSADEAFLVAVKRMGSLDELS REFAREHSERLWKQLVLTGGPAADTRSRRDLRMLVLCAAGAAVSVKAPELFGVRMTDDGSASFYGPNLSLFVLPWLAGFL AWRRQAPRPLVGILAALFALGAVAANVYPLGDDSQSVVVTSIHLPIALWLVVGLAYAADDWRSSRRRMDFIRFTGEWFVY FVLIALGGGVLTVFTAGTFEAIGIVSDDFISQWLLPCGAAAGVIVAGWLVEAKQSVVENIAPVLTRLFTPLFTVVLLAFL IAVCCTGTGIDVERDALILFDLLLVVVLGLLLYSMSARDPLAPPDLFDRLQLALVVSALAIDVLVLLAVTGRITEYGTTP NKAAALGENAILLANLAWSAWLLLKLVRRHTPFAALERWQTSYLPVYAVWAWIVVLAFPPLFGYA
Sequences:
>Translated_465_residues MTAQEGQQALEAQQPLDALEAQFAQWRHYAQRRRELRTADADELEDHLRGSVDELVMAGLSADEAFLVAVKRMGSLDELS REFAREHSERLWKQLVLTGGPAADTRSRRDLRMLVLCAAGAAVSVKAPELFGVRMTDDGSASFYGPNLSLFVLPWLAGFL AWRRQAPRPLVGILAALFALGAVAANVYPLGDDSQSVVVTSIHLPIALWLVVGLAYAADDWRSSRRRMDFIRFTGEWFVY FVLIALGGGVLTVFTAGTFEAIGIVSDDFISQWLLPCGAAAGVIVAGWLVEAKQSVVENIAPVLTRLFTPLFTVVLLAFL IAVCCTGTGIDVERDALILFDLLLVVVLGLLLYSMSARDPLAPPDLFDRLQLALVVSALAIDVLVLLAVTGRITEYGTTP NKAAALGENAILLANLAWSAWLLLKLVRRHTPFAALERWQTSYLPVYAVWAWIVVLAFPPLFGYA >Mature_464_residues TAQEGQQALEAQQPLDALEAQFAQWRHYAQRRRELRTADADELEDHLRGSVDELVMAGLSADEAFLVAVKRMGSLDELSR EFAREHSERLWKQLVLTGGPAADTRSRRDLRMLVLCAAGAAVSVKAPELFGVRMTDDGSASFYGPNLSLFVLPWLAGFLA WRRQAPRPLVGILAALFALGAVAANVYPLGDDSQSVVVTSIHLPIALWLVVGLAYAADDWRSSRRRMDFIRFTGEWFVYF VLIALGGGVLTVFTAGTFEAIGIVSDDFISQWLLPCGAAAGVIVAGWLVEAKQSVVENIAPVLTRLFTPLFTVVLLAFLI AVCCTGTGIDVERDALILFDLLLVVVLGLLLYSMSARDPLAPPDLFDRLQLALVVSALAIDVLVLLAVTGRITEYGTTPN KAAALGENAILLANLAWSAWLLLKLVRRHTPFAALERWQTSYLPVYAVWAWIVVLAFPPLFGYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50851; Mature: 50720
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQEGQQALEAQQPLDALEAQFAQWRHYAQRRRELRTADADELEDHLRGSVDELVMAGL CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCC SADEAFLVAVKRMGSLDELSREFAREHSERLWKQLVLTGGPAADTRSRRDLRMLVLCAAG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC AAVSVKAPELFGVRMTDDGSASFYGPNLSLFVLPWLAGFLAWRRQAPRPLVGILAALFAL CEEEEECCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GAVAANVYPLGDDSQSVVVTSIHLPIALWLVVGLAYAADDWRSSRRRMDFIRFTGEWFVY HHHHHCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLIALGGGVLTVFTAGTFEAIGIVSDDFISQWLLPCGAAAGVIVAGWLVEAKQSVVENI HHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH APVLTRLFTPLFTVVLLAFLIAVCCTGTGIDVERDALILFDLLLVVVLGLLLYSMSARDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LAPPDLFDRLQLALVVSALAIDVLVLLAVTGRITEYGTTPNKAAALGENAILLANLAWSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEEHHHHHHH WLLLKLVRRHTPFAALERWQTSYLPVYAVWAWIVVLAFPPLFGYA HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure TAQEGQQALEAQQPLDALEAQFAQWRHYAQRRRELRTADADELEDHLRGSVDELVMAGL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCC SADEAFLVAVKRMGSLDELSREFAREHSERLWKQLVLTGGPAADTRSRRDLRMLVLCAAG CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC AAVSVKAPELFGVRMTDDGSASFYGPNLSLFVLPWLAGFLAWRRQAPRPLVGILAALFAL CEEEEECCCEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GAVAANVYPLGDDSQSVVVTSIHLPIALWLVVGLAYAADDWRSSRRRMDFIRFTGEWFVY HHHHHCCEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLIALGGGVLTVFTAGTFEAIGIVSDDFISQWLLPCGAAAGVIVAGWLVEAKQSVVENI HHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH APVLTRLFTPLFTVVLLAFLIAVCCTGTGIDVERDALILFDLLLVVVLGLLLYSMSARDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LAPPDLFDRLQLALVVSALAIDVLVLLAVTGRITEYGTTPNKAAALGENAILLANLAWSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEEHHHHHHH WLLLKLVRRHTPFAALERWQTSYLPVYAVWAWIVVLAFPPLFGYA HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA