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The map label for this gene is fecI [C]

Identifier: 158313465

GI number: 158313465

Start: 1945448

End: 1946350

Strand: Direct

Name: fecI [C]

Synonym: Franean1_1629

Alternate gene names: 158313465

Gene position: 1945448-1946350 (Clockwise)

Preceding gene: 158313464

Following gene: 158313467

Centisome position: 21.66

GC content: 71.21

Gene sequence:

>903_bases
ATGACCTTCGAGCCCGCGTCCCCCGCGAACGGCGCCGCCTGGTACGCCGAACAGTTCGAACGCCAACGTCGCCAGCTGCG
CGCCGTCGCCTACCGCATGCTCGGCTCCTTCGCGGACGCCGACGACGCAGTGCAGGAAGCCTGGCTGCGGCTCAGCCGAG
CAGACGAGACGGCGATCGACAACCTGGCCGGGTGGCTGACCACCGTCGTCGGGCGCGTCTGCGTCGACATGCTGCGCGCC
CGCCGGGCGCGGCGCGAGGACCTGCCCGGCACGTGGCTGCCCGACCCGGTCATCACCGAGGCAGACACCCCCGATCCCGA
ACAACGCGTCCTGCTGGCCGACTCGGTCGGCCTGGCGCTCCTCGTCGTCCTGGACAACCTTCGACCGGCGGAACGGCTCG
CGTTCGTGCTGCACGACATGTTCGGCGTCCCGTTCGACGACATCGCTCCCATCCTCGAGAAGAGTCCGGCGGCGACACGG
CAGCTGGCCAGTCGCGCCCGTCGTCGTGTCCAGGGCAGCGGCACCCGGCCGGATCCCGACCTCCCCACCCAACGTCGCGT
GGCCGAAGCCTTCCTCGCCGCCGCTCGCAACGGTGATTTCGCCGCGCTCGTCGAACTCCTCGACCCGGACGTCAGACTCC
GGGTCGACACCGGGCCCCGCACCTGGCTCGCCCCACCACTGCTCACCGGAGCACGCGACGTCGCCAGCCACGCCGCCGCC
CAGGGCCCACGCTTCGCCGGCCCCTGGGAACCCGCCCTCGTCAACGGCGCCGCCGGCATGATCGCGCGTGGCAGAGCCGG
GCTGATCGCAGTCGTGGGATTCATCGTCGTCAACGGCCGCATCAGCGAGATCGACCTCATTCTCGACCCCGACAGGCTGG
CCGCCGTGAAAGTCAACGACTGA

Upstream 100 bases:

>100_bases
GACGGTCGAGATCACGACCAGCGAGAACGCCCCGACACTCCTACAGGTGATCCGGCGGGAGGCGTTCGGCCGTGACTGAC
CCCGCCGCCGACCACCTGTC

Downstream 100 bases:

>100_bases
TGCGATGCGCGTCCTAGCCGAACGCCTCCACGATCTCGGTGACGATGGCGCGCGCGGCCGGGGAGAGGTCGCGCCATCCG
GTGCCGAGGTCGGCGGCGAA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor; Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; ECF Family RNA Polymerase Sigma Factor; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma Factor Sigma; Sigma-70 Family RNA Polymerase; Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma Factor SigI; RNA Polymerase Sigma-24 Subunit; AlteRNAtive RNA Polymerase Sigma Factor SigJ-Like Protein; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase ECF-Type Sigma Factor SigJ

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTFEPASPANGAAWYAEQFERQRRQLRAVAYRMLGSFADADDAVQEAWLRLSRADETAIDNLAGWLTTVVGRVCVDMLRA
RRARREDLPGTWLPDPVITEADTPDPEQRVLLADSVGLALLVVLDNLRPAERLAFVLHDMFGVPFDDIAPILEKSPAATR
QLASRARRRVQGSGTRPDPDLPTQRRVAEAFLAAARNGDFAALVELLDPDVRLRVDTGPRTWLAPPLLTGARDVASHAAA
QGPRFAGPWEPALVNGAAGMIARGRAGLIAVVGFIVVNGRISEIDLILDPDRLAAVKVND

Sequences:

>Translated_300_residues
MTFEPASPANGAAWYAEQFERQRRQLRAVAYRMLGSFADADDAVQEAWLRLSRADETAIDNLAGWLTTVVGRVCVDMLRA
RRARREDLPGTWLPDPVITEADTPDPEQRVLLADSVGLALLVVLDNLRPAERLAFVLHDMFGVPFDDIAPILEKSPAATR
QLASRARRRVQGSGTRPDPDLPTQRRVAEAFLAAARNGDFAALVELLDPDVRLRVDTGPRTWLAPPLLTGARDVASHAAA
QGPRFAGPWEPALVNGAAGMIARGRAGLIAVVGFIVVNGRISEIDLILDPDRLAAVKVND
>Mature_299_residues
TFEPASPANGAAWYAEQFERQRRQLRAVAYRMLGSFADADDAVQEAWLRLSRADETAIDNLAGWLTTVVGRVCVDMLRAR
RARREDLPGTWLPDPVITEADTPDPEQRVLLADSVGLALLVVLDNLRPAERLAFVLHDMFGVPFDDIAPILEKSPAATRQ
LASRARRRVQGSGTRPDPDLPTQRRVAEAFLAAARNGDFAALVELLDPDVRLRVDTGPRTWLAPPLLTGARDVASHAAAQ
GPRFAGPWEPALVNGAAGMIARGRAGLIAVVGFIVVNGRISEIDLILDPDRLAAVKVND

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32630; Mature: 32498

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFEPASPANGAAWYAEQFERQRRQLRAVAYRMLGSFADADDAVQEAWLRLSRADETAID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NLAGWLTTVVGRVCVDMLRARRARREDLPGTWLPDPVITEADTPDPEQRVLLADSVGLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEHHHHHHH
LVVLDNLRPAERLAFVLHDMFGVPFDDIAPILEKSPAATRQLASRARRRVQGSGTRPDPD
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
LPTQRRVAEAFLAAARNGDFAALVELLDPDVRLRVDTGPRTWLAPPLLTGARDVASHAAA
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
QGPRFAGPWEPALVNGAAGMIARGRAGLIAVVGFIVVNGRISEIDLILDPDRLAAVKVND
CCCCCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
TFEPASPANGAAWYAEQFERQRRQLRAVAYRMLGSFADADDAVQEAWLRLSRADETAID
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
NLAGWLTTVVGRVCVDMLRARRARREDLPGTWLPDPVITEADTPDPEQRVLLADSVGLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEEHHHHHHH
LVVLDNLRPAERLAFVLHDMFGVPFDDIAPILEKSPAATRQLASRARRRVQGSGTRPDPD
HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
LPTQRRVAEAFLAAARNGDFAALVELLDPDVRLRVDTGPRTWLAPPLLTGARDVASHAAA
CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
QGPRFAGPWEPALVNGAAGMIARGRAGLIAVVGFIVVNGRISEIDLILDPDRLAAVKVND
CCCCCCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA