| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is baeS [H]
Identifier: 158313450
GI number: 158313450
Start: 1930459
End: 1931913
Strand: Direct
Name: baeS [H]
Synonym: Franean1_1613
Alternate gene names: 158313450
Gene position: 1930459-1931913 (Clockwise)
Preceding gene: 158313449
Following gene: 158313451
Centisome position: 21.49
GC content: 78.9
Gene sequence:
>1455_bases ATGCCTGACCCCGGGAGCCGCCCGAACCCGCGGAATCGGCGGCCCGCCGGGCTGGCGGTGCGGATCGCCCTGGCGACGAC CGCCGTCGCCGCGCTCGCGGTCCTGCTCACCGGCACGATCTTCGCCGGTCTCGTCGGCGGAGCCGCGGACGACGAGGCCC GCCGCGCGCTCGGCCGGCAGGCGGATGTCGTCGTCGCGCTCTACGACCGTCCCAACGCGACCGCCGACCTGCGCGCCGGG GTGACCAGGACGATCGCCGCCCAGCGGGTGACCTTCGTCCGGGTCGCCCCGGACGGCCGTCCGACCGCGCGCCAGGGGCC CGGTGGCGGCAGGGGCCTCGAGCTCCCGGCCGACGTCCTCGCCCGGGTCGCCGCCGGTGCGGAGGTCGGCACGGCCCGCA CCGTCGGCGGCCGGCGGGTGATCGTCGTCGGCCGGCCGCTCGCCCACGGCGGCGCGATCGCGCTCGTGCAACCGGCGTCC GAGAGTCGTCAGCTCGCCGGCGCCGTCCTGCGGCGGCTCGGGATCGCGCTGGTGTGCGGCCTTGCCGCCGCTACCGTTGC CGGCGCCGTCCTGGCGCGCCGGCTCGCCCGCCCGCTGCGGCGCCTCGCCGACGCCGCCCACCAGCTCGCCGCGGGCCGGC GCGACATCCGTGTCGGCACCGGCGGTCCGCGCGGCCCGGCCGAGGTGGCGGACGTCGGCGCCGCCCTCGACGGCCTCGCC GCGGCTCTCGCCGTCAGCGAGGACCGGCAGCGCAGGTTCCTGCTGTCCGTCTCGCACGAGCTGCGCACCCCGCTGACGGC CGTCCAGGGTTTCGCCGAGGCGCTCGCGGACGGCGTGACCGAGCCGGCCGACACCGCCGGCACCGGTCGGATCATCCTCG GGGAGGCCCGCCGTCTCGACCGGCTCGTCACCGACCTGCTCGACCTCGCCCGGCTCGGCGCGGACGACTTCCGGGTCGAC CTCGCGCCCGTGGACCTGGGCGCTCTGGTGGCCGGGGCGGTGGAGGTCTGGCGGCCGCGGTGCACGGCGGCCGGCGTCGA GCTGCGGGTCGAGCTGCCGGACGGGCCGGTGCCGGTGGTCACCGACCCGGTCCGCTTCCGGCAGATCGTCGACGGACTGG CCGAGAACGCGCTGCGGGTGGTCCCGGCCGGCGCGCCGATCGTGATGGCGCTGGGCGGCGGTCCCCAGGGGGCAGTGGTC CCTCAGGGGGTGGTGGTCCCCCCGGAGGCGGTGTTCGAGGTGCGGGACGGCGGTCCCGGCCTCACCGCCGACGACCTCGC CGTGGCCTTCGACCGCTCGGCGCTGTTCGAGCGCTACCGGGGCCGCCGGCCCGTCTCGACCGGCGTCGGGCTGGCGCTCG TCGCCGGGCTGGCCCGCCGCCTCGGCGGTGAGCCGTTCGCCGGGCACGCCCCCGAAGGCGGCGCCGTCTTCGGTATCCGG CTGCCGCCCGGCTGA
Upstream 100 bases:
>100_bases GCCGGCACCCGGACCGTCGATGTGCACGTGGCCCAGGTCCGGGCGAAACTCGGCCCGGCCAGCCCGATCCGCACCGTCCG CGGCGTCGGGTACACCGCCG
Downstream 100 bases:
>100_bases CCCTGCGCGGGGGTGAAAACTGCTGTCGTGTTAGCGCTGGATGGTGTCAGATAGCGCTGTATGGCGGTGGTGTGAACCTC AAGGAGTGGGCTGCGGTGAA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MPDPGSRPNPRNRRPAGLAVRIALATTAVAALAVLLTGTIFAGLVGGAADDEARRALGRQADVVVALYDRPNATADLRAG VTRTIAAQRVTFVRVAPDGRPTARQGPGGGRGLELPADVLARVAAGAEVGTARTVGGRRVIVVGRPLAHGGAIALVQPAS ESRQLAGAVLRRLGIALVCGLAAATVAGAVLARRLARPLRRLADAAHQLAAGRRDIRVGTGGPRGPAEVADVGAALDGLA AALAVSEDRQRRFLLSVSHELRTPLTAVQGFAEALADGVTEPADTAGTGRIILGEARRLDRLVTDLLDLARLGADDFRVD LAPVDLGALVAGAVEVWRPRCTAAGVELRVELPDGPVPVVTDPVRFRQIVDGLAENALRVVPAGAPIVMALGGGPQGAVV PQGVVVPPEAVFEVRDGGPGLTADDLAVAFDRSALFERYRGRRPVSTGVGLALVAGLARRLGGEPFAGHAPEGGAVFGIR LPPG
Sequences:
>Translated_484_residues MPDPGSRPNPRNRRPAGLAVRIALATTAVAALAVLLTGTIFAGLVGGAADDEARRALGRQADVVVALYDRPNATADLRAG VTRTIAAQRVTFVRVAPDGRPTARQGPGGGRGLELPADVLARVAAGAEVGTARTVGGRRVIVVGRPLAHGGAIALVQPAS ESRQLAGAVLRRLGIALVCGLAAATVAGAVLARRLARPLRRLADAAHQLAAGRRDIRVGTGGPRGPAEVADVGAALDGLA AALAVSEDRQRRFLLSVSHELRTPLTAVQGFAEALADGVTEPADTAGTGRIILGEARRLDRLVTDLLDLARLGADDFRVD LAPVDLGALVAGAVEVWRPRCTAAGVELRVELPDGPVPVVTDPVRFRQIVDGLAENALRVVPAGAPIVMALGGGPQGAVV PQGVVVPPEAVFEVRDGGPGLTADDLAVAFDRSALFERYRGRRPVSTGVGLALVAGLARRLGGEPFAGHAPEGGAVFGIR LPPG >Mature_483_residues PDPGSRPNPRNRRPAGLAVRIALATTAVAALAVLLTGTIFAGLVGGAADDEARRALGRQADVVVALYDRPNATADLRAGV TRTIAAQRVTFVRVAPDGRPTARQGPGGGRGLELPADVLARVAAGAEVGTARTVGGRRVIVVGRPLAHGGAIALVQPASE SRQLAGAVLRRLGIALVCGLAAATVAGAVLARRLARPLRRLADAAHQLAAGRRDIRVGTGGPRGPAEVADVGAALDGLAA ALAVSEDRQRRFLLSVSHELRTPLTAVQGFAEALADGVTEPADTAGTGRIILGEARRLDRLVTDLLDLARLGADDFRVDL APVDLGALVAGAVEVWRPRCTAAGVELRVELPDGPVPVVTDPVRFRQIVDGLAENALRVVPAGAPIVMALGGGPQGAVVP QGVVVPPEAVFEVRDGGPGLTADDLAVAFDRSALFERYRGRRPVSTGVGLALVAGLARRLGGEPFAGHAPEGGAVFGIRL PPG
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=290, Percent_Identity=31.0344827586207, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1790346, Length=341, Percent_Identity=27.8592375366569, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87081816, Length=235, Percent_Identity=31.4893617021277, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790436, Length=226, Percent_Identity=26.9911504424779, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790861, Length=390, Percent_Identity=30.2564102564103, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI48994928, Length=233, Percent_Identity=27.8969957081545, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788713, Length=265, Percent_Identity=24.5283018867925, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87082128, Length=268, Percent_Identity=25, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI145693157, Length=257, Percent_Identity=24.124513618677, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789403, Length=249, Percent_Identity=28.5140562248996, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786600, Length=205, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49414; Mature: 49282
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPGSRPNPRNRRPAGLAVRIALATTAVAALAVLLTGTIFAGLVGGAADDEARRALGRQ CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC ADVVVALYDRPNATADLRAGVTRTIAAQRVTFVRVAPDGRPTARQGPGGGRGLELPADVL CCEEEEEECCCCCCHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH ARVAAGAEVGTARTVGGRRVIVVGRPLAHGGAIALVQPASESRQLAGAVLRRLGIALVCG HHHHCCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH LAAATVAGAVLARRLARPLRRLADAAHQLAAGRRDIRVGTGGPRGPAEVADVGAALDGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH AALAVSEDRQRRFLLSVSHELRTPLTAVQGFAEALADGVTEPADTAGTGRIILGEARRLD HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHH RLVTDLLDLARLGADDFRVDLAPVDLGALVAGAVEVWRPRCTAAGVELRVELPDGPVPVV HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC TDPVRFRQIVDGLAENALRVVPAGAPIVMALGGGPQGAVVPQGVVVPPEAVFEVRDGGPG CCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCEEECCHHHEEEECCCCC LTADDLAVAFDRSALFERYRGRRPVSTGVGLALVAGLARRLGGEPFAGHAPEGGAVFGIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE LPPG CCCC >Mature Secondary Structure PDPGSRPNPRNRRPAGLAVRIALATTAVAALAVLLTGTIFAGLVGGAADDEARRALGRQ CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC ADVVVALYDRPNATADLRAGVTRTIAAQRVTFVRVAPDGRPTARQGPGGGRGLELPADVL CCEEEEEECCCCCCHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHH ARVAAGAEVGTARTVGGRRVIVVGRPLAHGGAIALVQPASESRQLAGAVLRRLGIALVCG HHHHCCCCCCCEEECCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH LAAATVAGAVLARRLARPLRRLADAAHQLAAGRRDIRVGTGGPRGPAEVADVGAALDGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHH AALAVSEDRQRRFLLSVSHELRTPLTAVQGFAEALADGVTEPADTAGTGRIILGEARRLD HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHH RLVTDLLDLARLGADDFRVDLAPVDLGALVAGAVEVWRPRCTAAGVELRVELPDGPVPVV HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC TDPVRFRQIVDGLAENALRVVPAGAPIVMALGGGPQGAVVPQGVVVPPEAVFEVRDGGPG CCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCEEECCHHHEEEECCCCC LTADDLAVAFDRSALFERYRGRRPVSTGVGLALVAGLARRLGGEPFAGHAPEGGAVFGIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE LPPG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]