| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is qor [H]
Identifier: 158313423
GI number: 158313423
Start: 1896243
End: 1897235
Strand: Direct
Name: qor [H]
Synonym: Franean1_1586
Alternate gene names: 158313423
Gene position: 1896243-1897235 (Clockwise)
Preceding gene: 158313418
Following gene: 158313427
Centisome position: 21.11
GC content: 75.33
Gene sequence:
>993_bases GTGAAGGCGGTCGTCCAGGACAGGTTCGGCCCGCCGGACATCCTGCGGCTGGCCGATGTCGACGTTCCGGTGCCGGGGCC GGACGAGGTGCTGGTGCGGGTGCGGGCCGCGGCGCTGAACCCGTACGACTGGCACATGCTGCGCGGCGACCCGTACGTCG CGCGGCTGATGGGCGGGATGGGGCTGCGCCGGCCGAAGAGCCGGGTGGCCGGGATCGACGCGGCCGGTGTGGTCGAGGCG GTCGGCGCGAACGTGCGCGAGCCGGGCCCGGGCACGGAGGTGTTCGGCTTCTGCCCGGGTGCCTTCGCCGAGCTCGCCCG CACCCGGCCGGGCATGCTGGCCCGCAAGCCGGCCGGCCTCGCCTTCTCCGACGCGGCGGCGCTGCCGACCGCCGGCACGA CGGCACTGCGCGGGGTGCGGGAGACCGGCGAGGTGCGGGCCGGGACCAGGCTGCTCGTCAACGGTGCCGCCGGTGGGGTG GGCACCTACGCCGTCCAGATCGCGGCCGGGCTGGGCGCTGAGGTGACCGGCGTGTGCAGCGGGCGCAACGCCGAACTGGT CCGCTCGCTTGGCGCCGCGCACGTCGTGGACTACACGGAGGACGACTTCACCGCGGACGGCTTCCTCGGGCGGCATGGGG GTTACGACGTGATCCTCGACAACGTCGGGAACCACCCGCTGCGCCGGCTGCGTCGGGCGCTCGCCCCGCGCGGCACGCTG GTGGTCAACGCGGGCGGCTCACCCGGGAAGGCGTTCGGCGCGGTCGGCGCCATGCTCGGGGCTGTCGCGGCCGACAGGTT CGTCCGCCAGCGCCTGCGTGTACTGCCCACCCGGCTCGACCGCTCCGAACTGGCCGCGCTCGCCGACCTCGCCGCGGCCG GCGGGCTCACCACCGTCGTCGACCGCACGATCCCGCTGGTCGACGTCGCCGCGGGACTGGCCCTGGTCGAGGACGGCCAT GTCCGGGGAAAGATCGTCGTTGACGTGGCGTGA
Upstream 100 bases:
>100_bases TGACGGTTCTCGGTTTGGATGCCGGGCGCGCCCGCGCCGCGGTGGCGGCCGGTCGGCCCGGTCGGCCTGGTCAGCCCGGT CAGCCCGGTCGGAGGTCACG
Downstream 100 bases:
>100_bases CTCCGCGCGCGGCCGGCCCCGCGCCCGCAGCCCGCCGCGCGATCACTCGCTCGCGAGGCGCAGCCGCGGCCCGCGCCCGC GGCGCAGGCCACGGTCAGGT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKAVVQDRFGPPDILRLADVDVPVPGPDEVLVRVRAAALNPYDWHMLRGDPYVARLMGGMGLRRPKSRVAGIDAAGVVEA VGANVREPGPGTEVFGFCPGAFAELARTRPGMLARKPAGLAFSDAAALPTAGTTALRGVRETGEVRAGTRLLVNGAAGGV GTYAVQIAAGLGAEVTGVCSGRNAELVRSLGAAHVVDYTEDDFTADGFLGRHGGYDVILDNVGNHPLRRLRRALAPRGTL VVNAGGSPGKAFGAVGAMLGAVAADRFVRQRLRVLPTRLDRSELAALADLAAAGGLTTVVDRTIPLVDVAAGLALVEDGH VRGKIVVDVA
Sequences:
>Translated_330_residues MKAVVQDRFGPPDILRLADVDVPVPGPDEVLVRVRAAALNPYDWHMLRGDPYVARLMGGMGLRRPKSRVAGIDAAGVVEA VGANVREPGPGTEVFGFCPGAFAELARTRPGMLARKPAGLAFSDAAALPTAGTTALRGVRETGEVRAGTRLLVNGAAGGV GTYAVQIAAGLGAEVTGVCSGRNAELVRSLGAAHVVDYTEDDFTADGFLGRHGGYDVILDNVGNHPLRRLRRALAPRGTL VVNAGGSPGKAFGAVGAMLGAVAADRFVRQRLRVLPTRLDRSELAALADLAAAGGLTTVVDRTIPLVDVAAGLALVEDGH VRGKIVVDVA >Mature_330_residues MKAVVQDRFGPPDILRLADVDVPVPGPDEVLVRVRAAALNPYDWHMLRGDPYVARLMGGMGLRRPKSRVAGIDAAGVVEA VGANVREPGPGTEVFGFCPGAFAELARTRPGMLARKPAGLAFSDAAALPTAGTTALRGVRETGEVRAGTRLLVNGAAGGV GTYAVQIAAGLGAEVTGVCSGRNAELVRSLGAAHVVDYTEDDFTADGFLGRHGGYDVILDNVGNHPLRRLRRALAPRGTL VVNAGGSPGKAFGAVGAMLGAVAADRFVRQRLRVLPTRLDRSELAALADLAAAGGLTTVVDRTIPLVDVAAGLALVEDGH VRGKIVVDVA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=362, Percent_Identity=30.939226519337, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=28.8343558282209, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=28.8343558282209, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI194239676, Length=315, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI22538446, Length=346, Percent_Identity=27.7456647398844, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI22538444, Length=346, Percent_Identity=27.7456647398844, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI24308257, Length=356, Percent_Identity=26.9662921348315, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI28557745, Length=356, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI18379349, Length=304, Percent_Identity=27.9605263157895, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI67078404, Length=337, Percent_Identity=24.3323442136499, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=27.82874617737, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71987554, Length=238, Percent_Identity=33.1932773109244, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17507255, Length=245, Percent_Identity=32.2448979591837, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323729, Length=352, Percent_Identity=24.7159090909091, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6319621, Length=357, Percent_Identity=25.7703081232493, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=353, Percent_Identity=25.2124645892351, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=350, Percent_Identity=22.8571428571429, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324486, Length=218, Percent_Identity=26.605504587156, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581341, Length=364, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24581339, Length=364, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34023; Mature: 34023
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVVQDRFGPPDILRLADVDVPVPGPDEVLVRVRAAALNPYDWHMLRGDPYVARLMGGM CCCCCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCC GLRRPKSRVAGIDAAGVVEAVGANVREPGPGTEVFGFCPGAFAELARTRPGMLARKPAGL CCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCC AFSDAAALPTAGTTALRGVRETGEVRAGTRLLVNGAAGGVGTYAVQIAAGLGAEVTGVCS EECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHEEHHHCCCCCEEEEEC GRNAELVRSLGAAHVVDYTEDDFTADGFLGRHGGYDVILDNVGNHPLRRLRRALAPRGTL CCCHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEE VVNAGGSPGKAFGAVGAMLGAVAADRFVRQRLRVLPTRLDRSELAALADLAAAGGLTTVV EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH DRTIPLVDVAAGLALVEDGHVRGKIVVDVA HCCCCHHHHHHCEEEEECCCCCEEEEEEEC >Mature Secondary Structure MKAVVQDRFGPPDILRLADVDVPVPGPDEVLVRVRAAALNPYDWHMLRGDPYVARLMGGM CCCCCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHCCC GLRRPKSRVAGIDAAGVVEAVGANVREPGPGTEVFGFCPGAFAELARTRPGMLARKPAGL CCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCC AFSDAAALPTAGTTALRGVRETGEVRAGTRLLVNGAAGGVGTYAVQIAAGLGAEVTGVCS EECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHEEHHHCCCCCEEEEEC GRNAELVRSLGAAHVVDYTEDDFTADGFLGRHGGYDVILDNVGNHPLRRLRRALAPRGTL CCCHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEE VVNAGGSPGKAFGAVGAMLGAVAADRFVRQRLRVLPTRLDRSELAALADLAAAGGLTTVV EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH DRTIPLVDVAAGLALVEDGHVRGKIVVDVA HCCCCHHHHHHCEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]