Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158313427

Identifier: 158313427

GI number: 158313427

Start: 1899666

End: 1900727

Strand: Direct

Name: 158313427

Synonym: Franean1_1590

Alternate gene names: NA

Gene position: 1899666-1900727 (Clockwise)

Preceding gene: 158313423

Following gene: 158313428

Centisome position: 21.15

GC content: 76.65

Gene sequence:

>1062_bases
ATGACGAAACGGGACGGACCCCCGCGCCACCGCCGCGCCACGCTCCTCGCCGCGGCCGCGCTCGCCGTGCTGCCGGCCGC
GTCGCTGGTCGCGTGCGGCCCGGGAGAGTCGCTGCCGATCGCCGCCGGTGGCGCGGGCACGACACCAGGCACGGGCACCG
GCACGGGGGGCGCACCGACGGACGGCGGCACGCCGTCGCCCGGCACCGCGCTCCCGGTCGGCAGGTCGACCCGGACGATC
AGCGTCGGCGGTGTCCAACGGACGGTGCACGCCTACCGGCCGGCCGGGCTCACCGGGCCGGCGCCCCTCGTCGTCATGCT
GCACGGCGGCTACGGCGGTGGAACCCAGGCCGAGGACTCCTACCACTGGGATCAGGCCGCCGACCGTGGCCGGTTCGTCG
CCCTGTTTCCCGACGGCACGGACAAGTCGTGGAACGCCGGCGGCGGCTGCTGCGGCCCGGCCGCCCGGACGGGCGTCGAC
GACGTCGCCTTCCTCAAGGAGGCCGTGGCCACGGTCCGCCGGCAGACCGGGATCGACCCGGACCGCGTCTACGTCTCCGG
CGTGTCCAACGGCGGCGCGATGGCCTACCGGATGGCCTGCGAGACCGACCTCTTCGCCGCCGTCGGTGTGGACTCGACCA
CGATGCTCGTCGACTGCGCCGGGGCGGCACCGGCGTCGGTCCTGCACATCCACGGCGCCGCCGACCCGGTGATCCGCTAC
GACGGCGCGCCCGGCGAGCCCTACAGTCCGCGCAGCCCCGCGATCGACGGCCCGCCAGTGCCGGACGCGAACGCCGCCTG
GCGGCGCATCGACCGCTGCGCCCCGCCCCGGACGACGACCTCGGGAGTACTGACGACCTCGACCGCGACCTGCCCGGAGG
GCCGCGACGTCGAGCTGGTCACCATCGCGGGCGCGGGACACCAGTGGCCCGGGGCGACGCCGAACCCGCTCGCCGAGCGG
CTCGGCGCCGGCACCCCGTCAACCGCCCTCGACGCCACCGAGACGATCTGGCGGTTCTTCGCCGACCACCCCCGTCCCCG
TGCCGCCACCCCGCCGGCCTGA

Upstream 100 bases:

>100_bases
TGGACATGTGAGTCACGTTAGCTCTCGGCCACGTCGACATTCCGGTCGCGCAGAAGTCCGCCGTTGCAAATAAGAAAGAC
CCTTGCCTATTCTGCCGGGC

Downstream 100 bases:

>100_bases
CCCCCGCACCCCATCGCGCTGACCCGCCCGCACCCGTCGGCCTGACGCGCCGCCGGGCCGCCGGGCCGGCCAAGCCGTCC
TACCAGGGGCTATGCCCTAT

Product: poly(3-hydroxybutyrate) depolymerase-like protein

Products: NA

Alternate protein names: Polyhydroxybutyrate Depolymerase; Phospholipase/Carboxylesterase; Lipoprotein; Esterase; Lipoprotein LpqP; Secreted Hydrolase; Esterase Lipoprotein LpqC; Secreted Esterase; Esterase/Lipase/Thioesterase; Esterase Lipoprotein; Hydrolase; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase; Carbohydrate Esterase Family 1 Protein; Alpha/Beta Family Hydrolase; LOW QUALITY PROTEIN Esterase Lipoprotein LpqC; Esterase-Like Protein; Poly(3-Hydroxybutyrate) Depolymerase-Like; Secreted Protein

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTI
SVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVD
DVAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY
DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAER
LGAGTPSTALDATETIWRFFADHPRPRAATPPA

Sequences:

>Translated_353_residues
MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTI
SVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVD
DVAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY
DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAER
LGAGTPSTALDATETIWRFFADHPRPRAATPPA
>Mature_352_residues
TKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPTDGGTPSPGTALPVGRSTRTIS
VGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDSYHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDD
VAFLKEAVATVRRQTGIDPDRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRYD
GAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELVTIAGAGHQWPGATPNPLAERL
GAGTPSTALDATETIWRFFADHPRPRAATPPA

Specific function: Unknown

COG id: COG3509

COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35694; Mature: 35563

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCC
DGGTPSPGTALPVGRSTRTISVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDS
CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
YHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDDVAFLKEAVATVRRQTGIDP
CCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC
DRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY
CEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEE
DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEE
TIAGAGHQWPGATPNPLAERLGAGTPSTALDATETIWRFFADHPRPRAATPPA
EEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TKRDGPPRHRRATLLAAAALAVLPAASLVACGPGESLPIAAGGAGTTPGTGTGTGGAPT
CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCCCCCCCC
DGGTPSPGTALPVGRSTRTISVGGVQRTVHAYRPAGLTGPAPLVVMLHGGYGGGTQAEDS
CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
YHWDQAADRGRFVALFPDGTDKSWNAGGGCCGPAARTGVDDVAFLKEAVATVRRQTGIDP
CCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC
DRVYVSGVSNGGAMAYRMACETDLFAAVGVDSTTMLVDCAGAAPASVLHIHGAADPVIRY
CEEEEEECCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEE
DGAPGEPYSPRSPAIDGPPVPDANAAWRRIDRCAPPRTTTSGVLTTSTATCPEGRDVELV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEEE
TIAGAGHQWPGATPNPLAERLGAGTPSTALDATETIWRFFADHPRPRAATPPA
EEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA