| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is grpE2 [H]
Identifier: 158313407
GI number: 158313407
Start: 1876757
End: 1877242
Strand: Direct
Name: grpE2 [H]
Synonym: Franean1_1570
Alternate gene names: 158313407
Gene position: 1876757-1877242 (Clockwise)
Preceding gene: 158313406
Following gene: 158313408
Centisome position: 20.89
GC content: 76.95
Gene sequence:
>486_bases ATGATGACTGACCACCCCGACGGCGCGGACCTGGCGGCCGAGCTGGAGGAGTCGCAGGCCAGACATCTGCGGACGCTGGC CGACTTCGACAACTACCGCCGCCGGACCGGACGGGAGATCAGCGCCGCCATGGCGGCCGAGCGGGACCGCGTCGTCCTCG CCTGGCTGCCGGTGCTCGACCACCTGGAGCTGGCCCTCGCCCACGCGGATGCCGACCCCGACTCCCTCGTCGACGGCGTG CGCGGGGTGCGCCAGCTCGCGCTCGACGCGCTGCGGATCTCCGGCGTCGCCCGGCTCGACGACGAGACCGGCCCCTTCGA CCCGGCCCGGCACGAGGTCGGCGCCGTCGTCGACAGCGCCTCGACGCCGCAGCCGCCCCCGGCGGGCACCGTCGTCGAGG TCCTGCGCCCCGGCGTCGAGGCCGGCGGGCGGGTGCTGCGGCCGGCGTCGGTCGCGGTGAGCGCCGGCCCGCGGACGGCG ACATGA
Upstream 100 bases:
>100_bases GCGAGTGGCACCGGTTCGGGCGCGAGTGGCACCGGTTCGGGAGCCGGCGGGCACGGCGTCGGCGGGGACGATGTGATCGA CGCCGAGTTCACCACCCGCG
Downstream 100 bases:
>100_bases GCGCCGGGACGACGGGACGCGCGAGCCCGGACTTCTACGAGCTGCTCGGCGTGCCGCGTGACGCCGACACCGACGCCATC CAGCGTGCGTACCGCAAGCT
Product: GrpE protein
Products: NA
Alternate protein names: HSP-70 cofactor 2 [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MMTDHPDGADLAAELEESQARHLRTLADFDNYRRRTGREISAAMAAERDRVVLAWLPVLDHLELALAHADADPDSLVDGV RGVRQLALDALRISGVARLDDETGPFDPARHEVGAVVDSASTPQPPPAGTVVEVLRPGVEAGGRVLRPASVAVSAGPRTA T
Sequences:
>Translated_161_residues MMTDHPDGADLAAELEESQARHLRTLADFDNYRRRTGREISAAMAAERDRVVLAWLPVLDHLELALAHADADPDSLVDGV RGVRQLALDALRISGVARLDDETGPFDPARHEVGAVVDSASTPQPPPAGTVVEVLRPGVEAGGRVLRPASVAVSAGPRTA T >Mature_161_residues MMTDHPDGADLAAELEESQARHLRTLADFDNYRRRTGREISAAMAAERDRVVLAWLPVLDHLELALAHADADPDSLVDGV RGVRQLALDALRISGVARLDDETGPFDPARHEVGAVVDSASTPQPPPAGTVVEVLRPGVEAGGRVLRPASVAVSAGPRTA T
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded
COG id: COG0576
COG function: function code O; Molecular chaperone GrpE (heat shock protein)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the grpE family [H]
Homologues:
Organism=Escherichia coli, GI1788967, Length=153, Percent_Identity=33.9869281045752, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: 2359 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000740 - InterPro: IPR013805 - InterPro: IPR009012 [H]
Pfam domain/function: PF01025 GrpE [H]
EC number: NA
Molecular weight: Translated: 17066; Mature: 17066
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDHPDGADLAAELEESQARHLRTLADFDNYRRRTGREISAAMAAERDRVVLAWLPVLD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHH HLELALAHADADPDSLVDGVRGVRQLALDALRISGVARLDDETGPFDPARHEVGAVVDSA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHCCC STPQPPPAGTVVEVLRPGVEAGGRVLRPASVAVSAGPRTAT CCCCCCCCCHHHHHHHCCHHCCCCEECCHHEEEECCCCCCC >Mature Secondary Structure MMTDHPDGADLAAELEESQARHLRTLADFDNYRRRTGREISAAMAAERDRVVLAWLPVLD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHH HLELALAHADADPDSLVDGVRGVRQLALDALRISGVARLDDETGPFDPARHEVGAVVDSA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHCCC STPQPPPAGTVVEVLRPGVEAGGRVLRPASVAVSAGPRTAT CCCCCCCCCHHHHHHHCCHHCCCCEECCHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]