The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158313342

Identifier: 158313342

GI number: 158313342

Start: 1807440

End: 1807823

Strand: Direct

Name: 158313342

Synonym: Franean1_1504

Alternate gene names: NA

Gene position: 1807440-1807823 (Clockwise)

Preceding gene: 158313341

Following gene: 158313343

Centisome position: 20.12

GC content: 60.68

Gene sequence:

>384_bases
ATGGATTACCCACTTCTGTCGGCCTTCTGGACGATGCTGCTGTTCTTCGGGTTTCTCCTCTGGCTGTACGTGCTCTTCAT
CGTTGTATCGGATGTCTTTCGCAGTCGCGACCTCTCTGGCTGGGGGAAGGCCGGTTGGTTGACGGCCGTCATCATCCTTC
CGCTTCTGGGTGTTCTGGCGTACACCATATTCCGTGGCGACTCGATGGGTGAGCGGGCGTTTGAGGACGCACGACGGCAG
CAAGCCTTGCACGAGGCATTTCGGCCGTCCGCGGTGCAGTCTCAGGGGGTCGCCGACGAAATGGCGAAGCTGGTCGCTCT
CCGGAGGAATGGCGAGATCAGCGAGGAGGATTTCCAGCAGGCGAAGTCCCGGGTCCTGGCCTGA

Upstream 100 bases:

>100_bases
GCAGGCCGACGAGCAAACCGTGTGGTTGCGCGAGGTTCAGGTAGGTCTCCAACGAGACGTCGTTGACAAATTGCTGTTGA
CGTACGTAAGGGGGCTCCTC

Downstream 100 bases:

>100_bases
GTTTCTCAAATGACGCCGAGCGCGCGTCCGGCGGCGACGGAATCCTGGCGGGAGGCTACGCTCGCGGACTCGTCGGCGTC
GAGATTCCCGTGGATGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ
QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA

Sequences:

>Translated_127_residues
MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ
QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA
>Mature_127_residues
MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLAYTIFRGDSMGERAFEDARRQ
QALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQAKSRVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14406; Mature: 14406

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YTIFRGDSMGERAFEDARRQQALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH
AKSRVLA
HHHHCCC
>Mature Secondary Structure
MDYPLLSAFWTMLLFFGFLLWLYVLFIVVSDVFRSRDLSGWGKAGWLTAVIILPLLGVLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
YTIFRGDSMGERAFEDARRQQALHEAFRPSAVQSQGVADEMAKLVALRRNGEISEEDFQQ
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHH
AKSRVLA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA