| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313341
Identifier: 158313341
GI number: 158313341
Start: 1805894
End: 1807405
Strand: Direct
Name: 158313341
Synonym: Franean1_1503
Alternate gene names: NA
Gene position: 1805894-1807405 (Clockwise)
Preceding gene: 158313340
Following gene: 158313342
Centisome position: 20.11
GC content: 70.77
Gene sequence:
>1512_bases ATGGCAGCTGTCGTCAGCTCGCCGCCGGTCGTGGCAGGTTCGCGGCCACGGCTGTCCGAGAGGTCTGAACGGCTCACGCC GACCGAACGTGCGGCCTGGGGAAAGAGCACGAGGACGCGCGCGCCGCGCGGGATCCATGGCGAGTATGCGCCGGCGTCGG GCCGGGTCGATCCGGTCGACCTGCTCGAACGGCAGTCGGGGACGCGGCTGCCTGAGCTCGTCCCGCTGCGCTATCAGCGC ATGCTGGAGTCTCCGTTCCGGTTCTTTCGCGGTGCTGCCGCGGTCATGGCGGCGGATCTCGCCGGCACGCCGGTCTCGGG GATCGACGTCCAGCTCTGCGGCGACGCGCACCTGCTCAACTTCCGTCTGCTCGCGTCCCCCGAGCGCCACCTGGTGTTCG ACATCAACGACTTCGACGAGACACTTCCCGGCCCGTGGGAGTGGGACGTGAAACGGCTGGCCGCGAGCCTGGTCATCGCC GGCCGCGGCAACGGGTTCGCGCCGGCGCGGCGACAGGCGGCCGTCATCGCGGCGATCGGTGCGTACCGGGCCTGGATGCG CCGGTTCGCGGCCATGACCAACCTCGATGTCTGGTACGCCCACGTCGACGTGGATCAGCTTCGTGCCCGTCTCGCGGGCG TGCTGGGTCGGCGGTACTCCAGGCGTCTGTCCCGCGCGACGATCAGTGCCCGGTCCCGTGACCGGCTGCGGGCGTTCGCT CGGCTGACCGAGGTGACCGAGGGCCAGCCTCGTTTCGTCTCCGACCCGCCGCTGCTCGTCCCGGTCCGCGAGCTGCTCCG CGGAGCCGAGCACGACCTGTTGACAGGTCAGCTCACGACCGTCATCGACCGGTACGGCGCCACCCTGGCGGATGACCGGC GTTCGCTGCTCGCCCAGTACCGGCTCGTCGACGTCGCGCGCAAGGTCGTCGGCGTCGGCAGCGTGGGTACCCGCTGCTGG GTGGCGCTGCTGCTCGGCCGTGACCGTGACGACCCGCTGCTGTTGCAGGTCAAGGAGGCGCAGGCGTCGGTCCTGGCGGA TCATCTGCCCGGCAGCCGGTACGGCAACCAGGGGGAACGGGTCGTCGCCGGGCAACGTCTGATGCAGGCCGCCGGGGACA TCTTCCTCGGCTGGCAGCGGGTGGACGGCATCGACGGGCAGTGCCGCGACTTCTACATCCGCCAGTTGCAGGACTGGAAG GGCATCGCGCTCCCCGAACGCATGGACCCCGACGGCCTCGCCCTGTTCGCGCGGCTGTGCGGGGCGACCCTCGCCCGGGC CCACGCCCGCTCAGGTGACCGCGTGGCGATCGGGGCCTACCTCGGCGCCGGAGACGCCTTCGACCGGGCGATCGTCCGGT TCGCCGAGGCCTATGCGGACCAGAACGAACGTGATTTCGCGGCGCTCGCCGAGGCCGTGCGGTCCGGACGGATCAGGATC AGCACGGCAGGCCGACGAGCAAACCGTGTGGTTGCGCGAGGTTCAGGTAGGTCTCCAACGAGACGTCGTTGA
Upstream 100 bases:
>100_bases GTCGGGACTACGGTCGGGCGAGCACCGGCACGACCCTCGACGCGGGCTCCGCCGCCGACGTCGCCTCCGACCGGCCCGCC GATACGGTGTGAGGTAGAGC
Downstream 100 bases:
>100_bases CAAATTGCTGTTGACGTACGTAAGGGGGCTCCTCATGGATTACCCACTTCTGTCGGCCTTCTGGACGATGCTGCTGTTCT TCGGGTTTCTCCTCTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MAAVVSSPPVVAGSRPRLSERSERLTPTERAAWGKSTRTRAPRGIHGEYAPASGRVDPVDLLERQSGTRLPELVPLRYQR MLESPFRFFRGAAAVMAADLAGTPVSGIDVQLCGDAHLLNFRLLASPERHLVFDINDFDETLPGPWEWDVKRLAASLVIA GRGNGFAPARRQAAVIAAIGAYRAWMRRFAAMTNLDVWYAHVDVDQLRARLAGVLGRRYSRRLSRATISARSRDRLRAFA RLTEVTEGQPRFVSDPPLLVPVRELLRGAEHDLLTGQLTTVIDRYGATLADDRRSLLAQYRLVDVARKVVGVGSVGTRCW VALLLGRDRDDPLLLQVKEAQASVLADHLPGSRYGNQGERVVAGQRLMQAAGDIFLGWQRVDGIDGQCRDFYIRQLQDWK GIALPERMDPDGLALFARLCGATLARAHARSGDRVAIGAYLGAGDAFDRAIVRFAEAYADQNERDFAALAEAVRSGRIRI STAGRRANRVVARGSGRSPTRRR
Sequences:
>Translated_503_residues MAAVVSSPPVVAGSRPRLSERSERLTPTERAAWGKSTRTRAPRGIHGEYAPASGRVDPVDLLERQSGTRLPELVPLRYQR MLESPFRFFRGAAAVMAADLAGTPVSGIDVQLCGDAHLLNFRLLASPERHLVFDINDFDETLPGPWEWDVKRLAASLVIA GRGNGFAPARRQAAVIAAIGAYRAWMRRFAAMTNLDVWYAHVDVDQLRARLAGVLGRRYSRRLSRATISARSRDRLRAFA RLTEVTEGQPRFVSDPPLLVPVRELLRGAEHDLLTGQLTTVIDRYGATLADDRRSLLAQYRLVDVARKVVGVGSVGTRCW VALLLGRDRDDPLLLQVKEAQASVLADHLPGSRYGNQGERVVAGQRLMQAAGDIFLGWQRVDGIDGQCRDFYIRQLQDWK GIALPERMDPDGLALFARLCGATLARAHARSGDRVAIGAYLGAGDAFDRAIVRFAEAYADQNERDFAALAEAVRSGRIRI STAGRRANRVVARGSGRSPTRRR >Mature_502_residues AAVVSSPPVVAGSRPRLSERSERLTPTERAAWGKSTRTRAPRGIHGEYAPASGRVDPVDLLERQSGTRLPELVPLRYQRM LESPFRFFRGAAAVMAADLAGTPVSGIDVQLCGDAHLLNFRLLASPERHLVFDINDFDETLPGPWEWDVKRLAASLVIAG RGNGFAPARRQAAVIAAIGAYRAWMRRFAAMTNLDVWYAHVDVDQLRARLAGVLGRRYSRRLSRATISARSRDRLRAFAR LTEVTEGQPRFVSDPPLLVPVRELLRGAEHDLLTGQLTTVIDRYGATLADDRRSLLAQYRLVDVARKVVGVGSVGTRCWV ALLLGRDRDDPLLLQVKEAQASVLADHLPGSRYGNQGERVVAGQRLMQAAGDIFLGWQRVDGIDGQCRDFYIRQLQDWKG IALPERMDPDGLALFARLCGATLARAHARSGDRVAIGAYLGAGDAFDRAIVRFAEAYADQNERDFAALAEAVRSGRIRIS TAGRRANRVVARGSGRSPTRRR
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55439; Mature: 55308
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVVSSPPVVAGSRPRLSERSERLTPTERAAWGKSTRTRAPRGIHGEYAPASGRVDPVD CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLERQSGTRLPELVPLRYQRMLESPFRFFRGAAAVMAADLAGTPVSGIDVQLCGDAHLLN HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEE FRLLASPERHLVFDINDFDETLPGPWEWDVKRLAASLVIAGRGNGFAPARRQAAVIAAIG EEEECCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHH AYRAWMRRFAAMTNLDVWYAHVDVDQLRARLAGVLGRRYSRRLSRATISARSRDRLRAFA HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTEVTEGQPRFVSDPPLLVPVRELLRGAEHDLLTGQLTTVIDRYGATLADDRRSLLAQY HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH RLVDVARKVVGVGSVGTRCWVALLLGRDRDDPLLLQVKEAQASVLADHLPGSRYGNQGER HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC VVAGQRLMQAAGDIFLGWQRVDGIDGQCRDFYIRQLQDWKGIALPERMDPDGLALFARLC HHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH GATLARAHARSGDRVAIGAYLGAGDAFDRAIVRFAEAYADQNERDFAALAEAVRSGRIRI HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE STAGRRANRVVARGSGRSPTRRR EECCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure AAVVSSPPVVAGSRPRLSERSERLTPTERAAWGKSTRTRAPRGIHGEYAPASGRVDPVD CCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH LLERQSGTRLPELVPLRYQRMLESPFRFFRGAAAVMAADLAGTPVSGIDVQLCGDAHLLN HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEE FRLLASPERHLVFDINDFDETLPGPWEWDVKRLAASLVIAGRGNGFAPARRQAAVIAAIG EEEECCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHH AYRAWMRRFAAMTNLDVWYAHVDVDQLRARLAGVLGRRYSRRLSRATISARSRDRLRAFA HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTEVTEGQPRFVSDPPLLVPVRELLRGAEHDLLTGQLTTVIDRYGATLADDRRSLLAQY HHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH RLVDVARKVVGVGSVGTRCWVALLLGRDRDDPLLLQVKEAQASVLADHLPGSRYGNQGER HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCC VVAGQRLMQAAGDIFLGWQRVDGIDGQCRDFYIRQLQDWKGIALPERMDPDGLALFARLC HHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH GATLARAHARSGDRVAIGAYLGAGDAFDRAIVRFAEAYADQNERDFAALAEAVRSGRIRI HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE STAGRRANRVVARGSGRSPTRRR EECCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA